RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 WFDC10BQ8IUB3 73 aa8.01□□□□□ -1.13
ACTN1-221ENST00000556571 OR2G3Q8NGZ4 309 aa8.01□□□□□ -1.13
ACTN1-221ENST00000556571 AGPAT4-IT1Q9H0P7 198 aa8.01□□□□□ -1.13
ACTN1-221ENST00000556571 MRPL16Q9NX20 251 aaKnown RBP8.01□□□□□ -1.13
ACTN1-221ENST00000556571 IGHV1OR15-1A0A075B7D0 117 aa8□□□□□ -1.13
ACTN1-221ENST00000556571 TRGV4A0A0C4DH28 118 aa8□□□□□ -1.13
ACTN1-221ENST00000556571 K7EQD1 137 aa8□□□□□ -1.13
ACTN1-221ENST00000556571 PSCAO43653 123 aa8□□□□□ -1.13
ACTN1-221ENST00000556571 CRYGDP07320 174 aa8□□□□□ -1.13
ACTN1-221ENST00000556571 RPL7L1Q6DKI1 246 aaKnown RBP8□□□□□ -1.13
ACTN1-221ENST00000556571 IQCF2Q8IXL9 164 aa8□□□□□ -1.13
ACTN1-221ENST00000556571 CMTM2Q8TAZ6 248 aa8□□□□□ -1.13
ACTN1-221ENST00000556571 PCNPQ8WW12 178 aaKnown RBP8□□□□□ -1.13
ACTN1-221ENST00000556571 PHYHIPLQ96FC7 376 aa8□□□□□ -1.13
ACTN1-221ENST00000556571 ARPC5LQ9BPX5 153 aa8□□□□□ -1.13
ACTN1-221ENST00000556571 SH3BGRL3Q9H299 93 aa8□□□□□ -1.13
ACTN1-221ENST00000556571 TP53TG3Q9ULZ0 132 aa8□□□□□ -1.13
ACTN1-221ENST00000556571 LRCOL1A6NCL2 159 aa7.99□□□□□ -1.13
ACTN1-221ENST00000556571 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
ACTN1-221ENST00000556571 SMLR1H3BR10 107 aa7.99□□□□□ -1.13
ACTN1-221ENST00000556571 HMGB3O15347 200 aaKnown RBP7.99□□□□□ -1.13
ACTN1-221ENST00000556571 ORM1P02763 201 aa7.99□□□□□ -1.13
ACTN1-221ENST00000556571 PLA2G1BP04054 148 aaKnown RBP7.99□□□□□ -1.13
ACTN1-221ENST00000556571 C9orf47Q6ZRZ4 202 aa7.99□□□□□ -1.13
ACTN1-221ENST00000556571 HYLS1Q96M11 299 aa7.99□□□□□ -1.13
ACTN1-221ENST00000556571 ACTR3CQ9C0K3 210 aaPredicted RBP7.99□□□□□ -1.13
ACTN1-221ENST00000556571 UBR4Q5T4S7 5183 aa7.99□□□□□ -1.13
ACTN1-221ENST00000556571 IGKV2-40A0A087WW87 121 aaPredicted RBP7.98□□□□□ -1.13
ACTN1-221ENST00000556571 EIF3GO75821 320 aaKnown RBP eCLIP7.98□□□□□ -1.13
ACTN1-221ENST00000556571 IGKV2D-40P01614 121 aaPredicted RBP7.98□□□□□ -1.13
ACTN1-221ENST00000556571 C1QBP02746 253 aa7.98□□□□□ -1.13
ACTN1-221ENST00000556571 ARL14EPLP0DKL9 152 aa7.98□□□□□ -1.13
ACTN1-221ENST00000556571 GYPEP15421 78 aa7.98□□□□□ -1.13
ACTN1-221ENST00000556571 ZNF415Q09FC8 603 aa7.98□□□□□ -1.13
ACTN1-221ENST00000556571 AKR1C8PQ5T2L2 129 aa7.98□□□□□ -1.13
ACTN1-221ENST00000556571 ZFAND2AQ8N6M9 145 aa7.98□□□□□ -1.13
ACTN1-221ENST00000556571 RAB24Q969Q5 203 aa7.98□□□□□ -1.13
ACTN1-221ENST00000556571 TXNDC17Q9BRA2 123 aa7.98□□□□□ -1.13
ACTN1-221ENST00000556571 OTORQ9NRC9 128 aa7.98□□□□□ -1.13
ACTN1-221ENST00000556571 HMCN2Q8NDA2 5059 aa7.97□□□□□ -1.13
ACTN1-221ENST00000556571 KANTRA0A1W2PQU2 76 aa7.97□□□□□ -1.13
ACTN1-221ENST00000556571 G3V3Q6 166 aa7.97□□□□□ -1.13
ACTN1-221ENST00000556571 CXorf1O96002 111 aa7.97□□□□□ -1.13
ACTN1-221ENST00000556571 ZNF345Q14585 488 aa7.97□□□□□ -1.13
ACTN1-221ENST00000556571 SERTAD4-AS1Q5TG53 156 aa7.97□□□□□ -1.13
ACTN1-221ENST00000556571 Q8N814 137 aa7.97□□□□□ -1.13
ACTN1-221ENST00000556571 ZNF479Q96JC4 524 aa7.97□□□□□ -1.13
ACTN1-221ENST00000556571 FAM30AQ9NZY2 134 aa7.97□□□□□ -1.13
ACTN1-221ENST00000556571 RPH3ALQ9UNE2 315 aa7.97□□□□□ -1.13
ACTN1-221ENST00000556571 A0A0D9SG52 128 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 RBAKDNA6NC62 111 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 PGPA6NDG6 321 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 HMSDA8MTL9 139 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 C9JCJ5 164 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 PFDN1O60925 122 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 SFTA3P0C7M3 94 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 STAG3L2P0CL84 134 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 STAG3L3P0CL85 134 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 GCHFRP30047 84 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 ZNF138P52744 262 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 PRR9Q5T870 116 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 Q6ZQT7 251 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 SH2D6Q7Z4S9 175 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 KCNRGQ8N5I3 272 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 DEFB104AQ8WTQ1 72 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 RASL10AQ92737 203 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 TMEM167BQ9NRX6 74 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 ZNF492Q9P255 531 aa7.96□□□□□ -1.14
ACTN1-221ENST00000556571 DNAH8Q96JB1 4490 aa7.95□□□□□ -1.14
ACTN1-221ENST00000556571 IGHV3-38A0A0C4DH36 116 aa7.95□□□□□ -1.14
ACTN1-221ENST00000556571 TRBV7-9A0A0J9YWB2 115 aa7.95□□□□□ -1.14
ACTN1-221ENST00000556571 K7EQM0 130 aa7.95□□□□□ -1.14
ACTN1-221ENST00000556571 TIRAPP58753 221 aa7.95□□□□□ -1.14
ACTN1-221ENST00000556571 EIF5AP63241 154 aaKnown RBP7.95□□□□□ -1.14
ACTN1-221ENST00000556571 SYT8Q8NBV8 401 aa7.95□□□□□ -1.14
ACTN1-221ENST00000556571 SPXQ9BT56 116 aa7.95□□□□□ -1.14
ACTN1-221ENST00000556571 ZNF471Q9BX82 626 aaPredicted RBP7.95□□□□□ -1.14
ACTN1-221ENST00000556571 BOLA1Q9Y3E2 137 aa7.95□□□□□ -1.14
ACTN1-221ENST00000556571 CTXND1A0A1B0GTU2 59 aa7.94□□□□□ -1.14
ACTN1-221ENST00000556571 IBA57-AS1B1ANH7 110 aa7.94□□□□□ -1.14
ACTN1-221ENST00000556571 DIRC3C9JPN6 131 aa7.94□□□□□ -1.14
ACTN1-221ENST00000556571 LINC01556Q5JQF7 62 aa7.94□□□□□ -1.14
ACTN1-221ENST00000556571 GOLT1AQ6ZVE7 132 aa7.94□□□□□ -1.14
ACTN1-221ENST00000556571 ARL6IP6Q8N6S5 226 aa7.94□□□□□ -1.14
ACTN1-221ENST00000556571 Q8TAT8 98 aa7.94□□□□□ -1.14
ACTN1-221ENST00000556571 SERTM2A0A1B0GWG4 89 aa7.93□□□□□ -1.14
ACTN1-221ENST00000556571 BCL2L11O43521 198 aa7.93□□□□□ -1.14
ACTN1-221ENST00000556571 MUC21Q5SSG8 566 aa7.93□□□□□ -1.14
ACTN1-221ENST00000556571 LINC00528Q8N1L1 170 aa7.93□□□□□ -1.14
ACTN1-221ENST00000556571 C5orf17Q8NAS9 161 aa7.93□□□□□ -1.14
ACTN1-221ENST00000556571 OR11H4Q8NGC9 324 aa7.93□□□□□ -1.14
ACTN1-221ENST00000556571 STOML3Q8TAV4 291 aa7.93□□□□□ -1.14
ACTN1-221ENST00000556571 NDFIP1Q9BT67 221 aa7.93□□□□□ -1.14
ACTN1-221ENST00000556571 CYTL1Q9NRR1 136 aa7.93□□□□□ -1.14
ACTN1-221ENST00000556571 hCG_2014768A0A024R1R8 64 aa7.92□□□□□ -1.14
ACTN1-221ENST00000556571 TRGV11A0A075B6L2 103 aa7.92□□□□□ -1.14
ACTN1-221ENST00000556571 TRAV8-6A0A0B4J262 113 aa7.92□□□□□ -1.14
ACTN1-221ENST00000556571 TRAV4A0A0B4J268 109 aa7.92□□□□□ -1.14
ACTN1-221ENST00000556571 UMAD1C9J7I0 102 aa7.92□□□□□ -1.14
ACTN1-221ENST00000556571 IFNA7P01567 189 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms