RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SPATA12Q7Z6I5 190 aa11.75□□□□□ -0.53
ARHGEF40-207ENST00000556399 K7EMI3 77 aa11.75□□□□□ -0.53
ARHGEF40-207ENST00000556399 PIP4P1Q86T03 277 aa11.75□□□□□ -0.53
ARHGEF40-207ENST00000556399 DAZ1Q9NQZ3 744 aaKnown RBP11.75□□□□□ -0.53
ARHGEF40-207ENST00000556399 KIAA1549Q9HCM3 1950 aa11.74□□□□□ -0.53
ARHGEF40-207ENST00000556399 WI2-2373I1.2A0A1W2PRP0 233 aa11.74□□□□□ -0.53
ARHGEF40-207ENST00000556399 IGLL5B9A064 214 aa11.74□□□□□ -0.53
ARHGEF40-207ENST00000556399 TMEM95Q3KNT9 176 aa11.74□□□□□ -0.53
ARHGEF40-207ENST00000556399 OR13C6PQ8NH95 151 aa11.74□□□□□ -0.53
ARHGEF40-207ENST00000556399 TMEM101Q96IK0 257 aa11.74□□□□□ -0.53
ARHGEF40-207ENST00000556399 SPXQ9BT56 116 aa11.74□□□□□ -0.53
ARHGEF40-207ENST00000556399 TRBV20-1A0A075B6N2 111 aa11.74□□□□□ -0.53
ARHGEF40-207ENST00000556399 TMEM141Q96I45 108 aa11.74□□□□□ -0.53
ARHGEF40-207ENST00000556399 C20orf78Q9BR46 151 aa11.74□□□□□ -0.53
ARHGEF40-207ENST00000556399 CEP192Q8TEP8 1941 aa11.74□□□□□ -0.53
ARHGEF40-207ENST00000556399 RUSC1-AS1Q66K80 236 aa11.74□□□□□ -0.53
ARHGEF40-207ENST00000556399 PPDPFLQ8WWR9 84 aa11.73□□□□□ -0.53
ARHGEF40-207ENST00000556399 RBAKDNA6NC62 111 aa11.73□□□□□ -0.53
ARHGEF40-207ENST00000556399 SDHAF1A6NFY7 115 aa11.73□□□□□ -0.53
ARHGEF40-207ENST00000556399 CTSGP08311 255 aa11.73□□□□□ -0.53
ARHGEF40-207ENST00000556399 C2orf82Q6UX34 121 aa11.73□□□□□ -0.53
ARHGEF40-207ENST00000556399 NPBQ8NG41 125 aa11.73□□□□□ -0.53
ARHGEF40-207ENST00000556399 TOMM7Q9P0U1 55 aa11.73□□□□□ -0.53
ARHGEF40-207ENST00000556399 COL5A1P20908 1838 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF40-207ENST00000556399 SH2D6Q7Z4S9 175 aa11.73□□□□□ -0.53
ARHGEF40-207ENST00000556399 DYSFO75923 2080 aa11.73□□□□□ -0.53
ARHGEF40-207ENST00000556399 ZNF493Q6ZR52 646 aa11.72□□□□□ -0.53
ARHGEF40-207ENST00000556399 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.72□□□□□ -0.535e-7■■■□□ 15.8
ARHGEF40-207ENST00000556399 SPRY2O43597 315 aa11.72□□□□□ -0.53
ARHGEF40-207ENST00000556399 TIMM21Q9BVV7 248 aa11.72□□□□□ -0.53
ARHGEF40-207ENST00000556399 TTC28Q96AY4 2481 aa11.72□□□□□ -0.53
ARHGEF40-207ENST00000556399 PRSS29PA6NIE9 313 aa11.72□□□□□ -0.53
ARHGEF40-207ENST00000556399 ATP6V0BQ99437 205 aa11.71□□□□□ -0.53
ARHGEF40-207ENST00000556399 HIGD1BQ9P298 99 aa11.71□□□□□ -0.53
ARHGEF40-207ENST00000556399 PLXNB1O43157 2135 aa11.71□□□□□ -0.53
ARHGEF40-207ENST00000556399 RBX1P62877 108 aa11.71□□□□□ -0.53
ARHGEF40-207ENST00000556399 PRAC2D3DTV9 90 aa11.71□□□□□ -0.54
ARHGEF40-207ENST00000556399 FOXI2Q6ZQN5 318 aa11.71□□□□□ -0.54
ARHGEF40-207ENST00000556399 Q8N976 141 aa11.71□□□□□ -0.54
ARHGEF40-207ENST00000556399 TRPT1Q86TN4 253 aaKnown RBP11.7□□□□□ -0.54
ARHGEF40-207ENST00000556399 RNASE1P07998 156 aaKnown RBP11.7□□□□□ -0.54
ARHGEF40-207ENST00000556399 MYCNOSP40205 109 aa11.7□□□□□ -0.54
ARHGEF40-207ENST00000556399 ODF1Q14990 250 aa11.7□□□□□ -0.54
ARHGEF40-207ENST00000556399 C1orf122Q6ZSJ8 110 aa11.7□□□□□ -0.54
ARHGEF40-207ENST00000556399 TECTAO75443 2155 aa11.7□□□□□ -0.54
ARHGEF40-207ENST00000556399 IGHV7-81A0A0B4J1V7 117 aa11.69□□□□□ -0.54
ARHGEF40-207ENST00000556399 NDUFA4O00483 81 aa11.69□□□□□ -0.54
ARHGEF40-207ENST00000556399 PRO1854Q9UHT4 67 aa11.69□□□□□ -0.54
ARHGEF40-207ENST00000556399 TRBV7-9A0A0J9YWB2 115 aa11.69□□□□□ -0.54
ARHGEF40-207ENST00000556399 G3V4G9 280 aa11.69□□□□□ -0.54
ARHGEF40-207ENST00000556399 WFDC2Q14508 124 aa11.69□□□□□ -0.54
ARHGEF40-207ENST00000556399 NOTCH3Q9UM47 2321 aa11.69□□□□□ -0.54
ARHGEF40-207ENST00000556399 LY6DQ14210 128 aa11.69□□□□□ -0.54
ARHGEF40-207ENST00000556399 MRPL53Q96EL3 112 aaKnown RBP11.69□□□□□ -0.54
ARHGEF40-207ENST00000556399 PEMTQ9UBM1 199 aa11.69□□□□□ -0.54
ARHGEF40-207ENST00000556399 LY6G5BQ8NDX9 201 aa11.68□□□□□ -0.54
ARHGEF40-207ENST00000556399 BUB3O43684 328 aa11.68□□□□□ -0.54
ARHGEF40-207ENST00000556399 HOXB4P17483 251 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF40-207ENST00000556399 GNRH2O43555 120 aa11.68□□□□□ -0.54
ARHGEF40-207ENST00000556399 GRNP28799 593 aaKnown RBP11.68□□□□□ -0.54
ARHGEF40-207ENST00000556399 RPL39LQ96EH5 51 aaKnown RBP11.68□□□□□ -0.54
ARHGEF40-207ENST00000556399 F6UB75 175 aa11.67□□□□□ -0.54
ARHGEF40-207ENST00000556399 J3QQQ9 107 aa11.67□□□□□ -0.54
ARHGEF40-207ENST00000556399 TCF15Q12870 199 aa11.67□□□□□ -0.54
ARHGEF40-207ENST00000556399 KLK9Q9UKQ9 250 aa11.67□□□□□ -0.54
ARHGEF40-207ENST00000556399 C22orf34Q6ZV56 151 aa11.67□□□□□ -0.54
ARHGEF40-207ENST00000556399 FGF6P10767 208 aa11.67□□□□□ -0.54
ARHGEF40-207ENST00000556399 SPINK13Q1W4C9 94 aa11.66□□□□□ -0.54
ARHGEF40-207ENST00000556399 MORN3Q6PF18 240 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF40-207ENST00000556399 EXPH5Q8NEV8 1989 aa11.66□□□□□ -0.54
ARHGEF40-207ENST00000556399 ZFHX2Q9C0A1 2572 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF40-207ENST00000556399 K7ENP7 123 aa11.66□□□□□ -0.54
ARHGEF40-207ENST00000556399 ZNF80P51504 273 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF40-207ENST00000556399 DSCR9P59020 149 aa11.66□□□□□ -0.54
ARHGEF40-207ENST00000556399 LENEPQ9Y5L5 61 aa11.66□□□□□ -0.54
ARHGEF40-207ENST00000556399 TRAV8-3A0A0A6YYJ7 113 aa11.65□□□□□ -0.54
ARHGEF40-207ENST00000556399 FANCD2OSQ96PS1 177 aa11.65□□□□□ -0.54
ARHGEF40-207ENST00000556399 TRGV2A0A075B6R0 118 aa11.65□□□□□ -0.54
ARHGEF40-207ENST00000556399 TRAV12-2A0A075B6T6 113 aa11.65□□□□□ -0.54
ARHGEF40-207ENST00000556399 CITED1Q99966 193 aa11.65□□□□□ -0.54
ARHGEF40-207ENST00000556399 IGHV1-69DA0A0B4J2H0 117 aa11.65□□□□□ -0.54
ARHGEF40-207ENST00000556399 I3L3M4 83 aa11.65□□□□□ -0.54
ARHGEF40-207ENST00000556399 IGHV1-69P01742 117 aa11.65□□□□□ -0.54
ARHGEF40-207ENST00000556399 STHQ8IWL8 128 aa11.64□□□□□ -0.55
ARHGEF40-207ENST00000556399 ZNF415Q09FC8 603 aa11.64□□□□□ -0.55
ARHGEF40-207ENST00000556399 PHLDA1Q8WV24 401 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF40-207ENST00000556399 SLC25A20O43772 301 aa11.64□□□□□ -0.55
ARHGEF40-207ENST00000556399 SYNJ2BPP57105 145 aa11.64□□□□□ -0.55
ARHGEF40-207ENST00000556399 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
ARHGEF40-207ENST00000556399 KNCNA6PVL3 124 aa11.64□□□□□ -0.55
ARHGEF40-207ENST00000556399 VWC2LB2RUY7 222 aa11.64□□□□□ -0.55
ARHGEF40-207ENST00000556399 ANKHD1Q8IWZ3 2542 aaKnown RBP11.64□□□□□ -0.55
ARHGEF40-207ENST00000556399 CRIP1P50238 77 aa11.63□□□□□ -0.55
ARHGEF40-207ENST00000556399 IGHV1OR15-1A0A075B7D0 117 aa11.63□□□□□ -0.55
ARHGEF40-207ENST00000556399 H3BMM0 161 aa11.63□□□□□ -0.55
ARHGEF40-207ENST00000556399 KLHL30-AS1Q8NEE0 82 aa11.63□□□□□ -0.55
ARHGEF40-207ENST00000556399 UBE2WQ96B02 151 aa11.63□□□□□ -0.55
ARHGEF40-207ENST00000556399 TANC2Q9HCD6 1990 aa11.63□□□□□ -0.55
ARHGEF40-207ENST00000556399 NAV3Q8IVL0 2385 aa11.63□□□□□ -0.55
ARHGEF40-207ENST00000556399 Q8N9W7 124 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms