RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ADORA2A-AS1P86434 159 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 C5orf64Q2M2E5 130 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 LGALS9BQ3B8N2 356 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 MAJINQ3KP22 176 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 ZNF672Q499Z4 452 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-241ENST00000556374 BVES-AS1Q5T3Y7 98 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 MINOS1Q5TGZ0 78 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 ASPHD1Q5U4P2 390 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 LINC01545Q5VT33 79 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 LGALS9CQ6DKI2 356 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 C16orf54Q6UWD8 224 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 LINC00322Q6ZN03 302 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-241ENST00000556374 ZNF493Q6ZR52 646 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 DEFB125Q8N687 156 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 WFDC11Q8NEX6 87 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 OR11H6Q8NGC7 330 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 ZNF414Q96IQ9 312 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 ZNF479Q96JC4 524 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 VPS25Q9BRG1 176 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 SLC50A1Q9BRV3 221 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 HILPDAQ9Y5L2 63 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 MINOS1-NBL1R4GNA1 71 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 NOTCH1P46531 2555 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 PRR14LQ5THK1 2151 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 IGLV11-55A0A075B6I3 123 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 IGKV2-40A0A087WW87 121 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-241ENST00000556374 IGHV2-70DA0A0C4DH43 119 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 MUC21A0A0G2JKD1 596 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 MUC21A0A140T8X8 626 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 LOC389332A0A1B0GUA5 103 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 INAFM1C9JVW0 142 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 CCL21O00585 134 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 PRYO14603 147 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 ATP5LO75964 103 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 GOSR1O95249 250 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 LY6G6DO95868 133 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 TGP01266 2768 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 IGKV1-17P01599 117 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 IGKV2D-40P01614 121 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-241ENST00000556374 FAM106CPP0CH98 169 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 COL8A2P25067 703 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 PCP4P48539 62 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 NMUP48645 174 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 CACNG7P62955 275 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 FHL3Q13643 280 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 MPV17L2Q567V2 206 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 PIK3CD-AS1Q5SR53 167 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 MUC21Q5SSG8 566 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 TMEM78Q5T7P6 136 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 LYZL1Q6UWQ5 148 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 SPATA12Q7Z6I5 190 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 LHFPL4Q7Z7J7 247 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 ZNF491Q8N8L2 437 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 NPBQ8NG41 125 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 OR4X2Q8NGF9 303 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 EEF1AKMT3Q96AZ1 226 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 IFI27L1Q96BM0 104 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 URB1-AS1Q96HZ7 61 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 PIMREGQ9BSJ6 248 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 NXT2Q9NPJ8 142 aaKnown RBP3.4□□□□□ -1.87
ATXN3-241ENST00000556374 HIF1ANQ9NWT6 349 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 MEGF8Q7Z7M0 2845 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 DOCK11Q5JSL3 2073 aa3.4□□□□□ -1.87
ATXN3-241ENST00000556374 HRNRQ86YZ3 2850 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-241ENST00000556374 DNAJC13O75165 2243 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 A0A087X0K7 114 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 C7orf71A4D174 169 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 RBAKDNA6NC62 111 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 GAGE10A6NGK3 116 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 OR2T8A6NH00 312 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 FABP5P3A8MUU1 101 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 ODF3BA8MYP8 253 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 LY6LH3BQJ8 138 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 K7EP13 123 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 M0R3E3 92 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 SIVA1O15304 175 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 CCL25O15444 150 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 FCN3O75636 299 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 IGLV2-11P01706 119 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 ORM1P02763 201 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 PRTN3P24158 256 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 CD24P25063 80 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 IFI27P40305 119 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-241ENST00000556374 CDKN1BP46527 198 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 ZNF138P52744 262 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 DLX1P56177 255 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 PRB3Q04118 309 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-241ENST00000556374 KLRD1Q13241 179 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 ECSCRQ19T08 205 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 MRGPRG-AS1Q2M3A8 158 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 TMEM95Q3KNT9 176 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 FBXL19-AS1Q494R0 122 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 FAM104BQ5XKR9 115 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 ZNF562Q6V9R5 426 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 LINC00173Q6ZV60 143 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 VMO1Q7Z5L0 202 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 AMN1Q8IY45 258 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 TTC9CQ8N5M4 171 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 LY6G5BQ8NDX9 201 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 OR5A1Q8NGJ0 315 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms