RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 APOC4P55056 127 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 FGF12P61328 243 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 PCBD1P61457 104 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF92Q03936 586 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 KLRD1Q13241 179 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 TMEM183BQ1AE95 376 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 C12orf74Q32Q52 190 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 Q499Y3 187 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 MEIG1Q5JSS6 88 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 MRPL54Q6P161 138 aaKnown RBP2.78□□□□□ -1.96
PRPF39-209ENST00000556353 AMTNQ6UX39 209 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 ZFP2Q6ZN57 461 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF826PQ6ZT77 177 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 SGPP2Q8IWX5 399 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 TMEM183AQ8IXX5 376 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 LYPD1Q8N2G4 141 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 EXOC3-AS1Q8N2X6 119 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 KCNRGQ8N5I3 272 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 TEX29Q8N6K0 151 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 TMEM252Q8N6L7 170 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 OR4K13Q8NH42 304 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 OR5AK2Q8NH90 309 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 RTN4IP1Q8WWV3 396 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-209ENST00000556353 OR2A7Q96R45 310 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 NMNAT3Q96T66 252 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 AMELYQ99218 206 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 SELENOIQ9C0D9 397 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 ATG5Q9H1Y0 275 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 UQCR10Q9UDW1 63 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 OR5V1Q9UGF6 321 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF257Q9Y2Q1 563 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 ENPP4Q9Y6X5 453 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 VPS13DQ5THJ4 4388 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 TRBV19A0A075B6N1 114 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 IGHV3OR15-7A0A075B7D8 119 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 A0A0D9SG52 128 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 A0A1B0GWB2 263 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 ZNF670-ZNF695F2Z2N8 137 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 LINC01619G3V211 115 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 ARL6IP5O75915 188 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 NDUFB2O95178 105 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 FSTL3O95633 263 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 CXorf1O96002 111 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 KRASP01116 189 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 LHBP01229 141 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 ATP5G1P05496 136 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 IGLC6P0CF74 106 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 PGA5P0DJD9 388 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 FABP4P15090 132 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 CRYBB3P26998 211 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 PSMB8P28062 276 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 LPAR6P43657 344 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 DAD1P61803 113 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 HBG1P69891 147 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 HBG2P69892 147 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 SLC38A11Q08AI6 406 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 ARFRP1Q13795 201 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 MMDQ15546 238 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 LGALSLQ3ZCW2 172 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-209ENST00000556353 LINC01590Q5TEZ4 76 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 Q5XG85 94 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 HCP5Q6MZN7 132 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 ALKAL2Q6UX46 152 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 HRCT1Q6UXD1 115 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 SCGB1D4Q6XE38 83 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 ZNF429Q86V71 674 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 FAM216BQ8N7L0 139 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 OR51G1Q8NGK1 321 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 OR2T27Q8NH04 317 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 ADAT1Q9BUB4 502 aaKnown RBP2.77□□□□□ -1.97
PRPF39-209ENST00000556353 VAMP8Q9BV40 100 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 RTL8AQ9BWD3 113 aa2.77□□□□□ -1.97
PRPF39-209ENST00000556353 NOP16Q9Y3C1 178 aaKnown RBP2.77□□□□□ -1.97
PRPF39-209ENST00000556353 DNAH2Q9P225 4427 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 IGLV4-69A0A075B6H9 119 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 LOC102724200A0A096LPH7 203 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-209ENST00000556353 TRAV8-2A0A0B4J237 113 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 CLPSL1A2RUU4 121 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 H3BQ15 152 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 LY6LH3BQJ8 138 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 M0R135 149 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 XKRYO14609 159 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 CA2P00918 260 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 GYPAP02724 150 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 GYPBP06028 91 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 SEC11BP0C7V7 166 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 IFITM1P13164 125 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 PPP1CCP36873 323 aaKnown RBP2.76□□□□□ -1.97
PRPF39-209ENST00000556353 AKR1C1Q04828 323 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 CATR1Q13166 79 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 MORN3Q6PF18 240 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-209ENST00000556353 TMEM14EPQ6UXP3 125 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 HEPN1Q6WQI6 88 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 TEX43Q6ZNM6 134 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 LHFPL1Q86WI0 220 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 C1orf174Q8IYL3 243 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 FTMTQ8N4E7 242 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 OR4B1Q8NGF8 309 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 OR8B3Q8NGG8 313 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms