RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 CYTL1Q9NRR1 136 aa4.42□□□□□ -1.7
TMEM260-209ENST00000556079 KCNIP2Q9NS61 270 aa4.42□□□□□ -1.7
TMEM260-209ENST00000556079 TNFSF18Q9UNG2 199 aa4.42□□□□□ -1.7
TMEM260-209ENST00000556079 RNF24Q9Y225 148 aa4.42□□□□□ -1.7
TMEM260-209ENST00000556079 PRELID1Q9Y255 219 aa4.42□□□□□ -1.7
TMEM260-209ENST00000556079 TRAV34A0A0B4J273 112 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 LOC100131303A0A0U1RQF7 123 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 A0A1B0GV50 99 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 A0A1W2PPV4 95 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 ARPC5O15511 151 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 SPINK4O60575 86 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 FUSP35637 526 aaKnown RBP eCLIP4.41□□□□□ -1.7
TMEM260-209ENST00000556079 FHITP49789 147 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 TCL1AP56279 114 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 UBE2G2P60604 165 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 ZNF266Q14584 549 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 ESRGQ1W209 222 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 RGS21Q2M5E4 152 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 ANXA2RQ3ZCQ2 193 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 ZNF493Q6ZR52 646 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 IQCF2Q8IXL9 164 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 ZNRF2Q8NHG8 242 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 GNPNAT1Q96EK6 184 aaPredicted RBP4.41□□□□□ -1.7
TMEM260-209ENST00000556079 C20orf144Q9BQM9 153 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 PYGO2Q9BRQ0 406 aa4.41□□□□□ -1.7
TMEM260-209ENST00000556079 TRGV2A0A075B6R0 118 aa4.4□□□□□ -1.71
TMEM260-209ENST00000556079 IGHV3-16A0A0C4DH30 117 aa4.4□□□□□ -1.71
TMEM260-209ENST00000556079 IGLV2-11P01706 119 aa4.4□□□□□ -1.71
TMEM260-209ENST00000556079 TYMSP04818 313 aa4.4□□□□□ -1.71
TMEM260-209ENST00000556079 STAG3L2P0CL84 134 aa4.4□□□□□ -1.71
TMEM260-209ENST00000556079 STAG3L3P0CL85 134 aa4.4□□□□□ -1.71
TMEM260-209ENST00000556079 TAS2R45P59539 299 aa4.4□□□□□ -1.71
TMEM260-209ENST00000556079 SRSF3P84103 164 aaKnown RBP4.4□□□□□ -1.71
TMEM260-209ENST00000556079 DAZ2Q13117 558 aaKnown RBP4.4□□□□□ -1.71
TMEM260-209ENST00000556079 C15orf53Q8NAA6 179 aa4.4□□□□□ -1.71
TMEM260-209ENST00000556079 OR2G3Q8NGZ4 309 aa4.4□□□□□ -1.71
TMEM260-209ENST00000556079 ZNF479Q96JC4 524 aa4.4□□□□□ -1.71
TMEM260-209ENST00000556079 FAM210BQ96KR6 192 aa4.4□□□□□ -1.71
TMEM260-209ENST00000556079 LINC00467Q9BRT7 94 aa4.4□□□□□ -1.71
TMEM260-209ENST00000556079 ATG101Q9BSB4 218 aa4.4□□□□□ -1.71
TMEM260-209ENST00000556079 TNFRSF18Q9Y5U5 241 aa4.4□□□□□ -1.71
TMEM260-209ENST00000556079 NBDYA0A0U1RRE5 68 aa4.39□□□□□ -1.71
TMEM260-209ENST00000556079 RBAKDNA6NC62 111 aa4.39□□□□□ -1.71
TMEM260-209ENST00000556079 CSN1S1P47710 185 aa4.39□□□□□ -1.71
TMEM260-209ENST00000556079 FHL2Q14192 279 aa4.39□□□□□ -1.71
TMEM260-209ENST00000556079 LGALS9BQ3B8N2 356 aa4.39□□□□□ -1.71
TMEM260-209ENST00000556079 RNF212Q495C1 297 aa4.39□□□□□ -1.71
TMEM260-209ENST00000556079 Q6AWC8 147 aa4.39□□□□□ -1.71
TMEM260-209ENST00000556079 DPPA3Q6W0C5 159 aa4.39□□□□□ -1.71
TMEM260-209ENST00000556079 PQLC2Q6ZP29 291 aa4.39□□□□□ -1.71
TMEM260-209ENST00000556079 PRNTQ86SH4 94 aa4.39□□□□□ -1.71
TMEM260-209ENST00000556079 ZNF680Q8NEM1 530 aa4.39□□□□□ -1.71
TMEM260-209ENST00000556079 CMTM2Q8TAZ6 248 aa4.39□□□□□ -1.71
TMEM260-209ENST00000556079 SUN5Q8TC36 379 aa4.39□□□□□ -1.71
TMEM260-209ENST00000556079 RXFP4Q8TDU9 374 aa4.39□□□□□ -1.71
TMEM260-209ENST00000556079 PSMG3Q9BT73 122 aaPredicted RBP4.39□□□□□ -1.71
TMEM260-209ENST00000556079 VPS13BQ7Z7G8 4022 aa4.38□□□□□ -1.71
TMEM260-209ENST00000556079 IGHV3-73A0A0B4J1V6 119 aa4.38□□□□□ -1.71
TMEM260-209ENST00000556079 TCRAP04437 139 aa4.38□□□□□ -1.71
TMEM260-209ENST00000556079 ZNF415Q09FC8 603 aa4.38□□□□□ -1.71
TMEM260-209ENST00000556079 LYPD1Q8N2G4 141 aa4.38□□□□□ -1.71
TMEM260-209ENST00000556079 INO80EQ8NBZ0 244 aaPredicted RBP4.38□□□□□ -1.71
TMEM260-209ENST00000556079 ST6GAL2Q96JF0 529 aa4.38□□□□□ -1.71
TMEM260-209ENST00000556079 ACTR3CQ9C0K3 210 aaPredicted RBP4.38□□□□□ -1.71
TMEM260-209ENST00000556079 TREM1Q9NP99 234 aa4.38□□□□□ -1.71
TMEM260-209ENST00000556079 PSG8Q9UQ74 426 aa4.38□□□□□ -1.71
TMEM260-209ENST00000556079 CTXND1A0A1B0GTU2 59 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 MAP1LC3B2A6NCE7 125 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 C9JCJ5 164 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 CXorf1O96002 111 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 GCGP01275 180 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 NMBP08949 121 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 CRYBA4P53673 196 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 IBA57Q5T440 356 aaKnown RBP4.37□□□□□ -1.71
TMEM260-209ENST00000556079 C1orf134Q5TEV5 83 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 Q6ZSN1 163 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 Q86TA4 180 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 C5orf17Q8NAS9 161 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 NHLRC2Q8NBF2 726 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 MAP1LC3BQ9GZQ8 125 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 JPT2Q9H910 190 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 AP5S1Q9NUS5 200 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 Q9UF83 564 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 EPDR1Q9UM22 224 aa4.37□□□□□ -1.71
TMEM260-209ENST00000556079 BORCS7-ASMTA0A0B4J1R7 106 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 GRIFINA4D1Z8 144 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 PGPEP1LA6NFU8 196 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 FAM74A7A6NL05 159 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 PEX7O00628 323 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 NXPH4O95158 308 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 CRIP1P50238 77 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 CCL18P55774 89 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 KRTAP10-2P60368 255 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 FLI1Q01543 452 aaPredicted RBP4.36□□□□□ -1.71
TMEM260-209ENST00000556079 AKR1C8PQ5T2L2 129 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 FAM159AQ6UWV7 190 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 WFDC10BQ8IUB3 73 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 C6orf223Q8N319 242 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 KCNRGQ8N5I3 272 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms