RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 LOC101927531A0A1B0GV80 90 aa0.53□□□□□ -2.32
SCFD1-217ENST00000555953 MPC1LP0DKB6 136 aa0.53□□□□□ -2.32
SCFD1-217ENST00000555953 PDE6GP18545 87 aa0.53□□□□□ -2.32
SCFD1-217ENST00000555953 SRP9P49458 86 aaKnown RBP0.53□□□□□ -2.32
SCFD1-217ENST00000555953 RPL37AP61513 92 aaKnown RBP0.53□□□□□ -2.32
SCFD1-217ENST00000555953 MIC13Q5XKP0 118 aa0.53□□□□□ -2.32
SCFD1-217ENST00000555953 IZUMO2Q6UXV1 221 aa0.53□□□□□ -2.32
SCFD1-217ENST00000555953 C10orf111Q8N326 155 aa0.53□□□□□ -2.32
SCFD1-217ENST00000555953 METTL1Q9UBP6 276 aaKnown RBP0.53□□□□□ -2.32
SCFD1-217ENST00000555953 BCORL1Q5H9F3 1711 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 SPTBP11277 2137 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 BORCS7-ASMTA0A0B4J1R7 106 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 NBDYA0A0U1RRE5 68 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 A0A1W2PPB8 328 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 NUPR2A6NF83 97 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 KIR3DP1A8MWS1 328 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 K7EIL1 84 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 ADCYAP1P18509 176 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 SMCO1Q147U7 214 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 LYPD5Q6UWN5 251 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 Q86TA4 180 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 LZICQ8WZA0 190 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 LINC00208Q96KT6 92 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 SLC35B3Q9H1N7 401 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 BOKQ9UMX3 212 aaPredicted RBP0.52□□□□□ -2.33
SCFD1-217ENST00000555953 SOGA1O94964 1423 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 PRG4Q92954 1404 aaPredicted RBP0.52□□□□□ -2.33
SCFD1-217ENST00000555953 MYH1P12882 1939 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 TANC2Q9HCD6 1990 aa0.52□□□□□ -2.33
SCFD1-217ENST00000555953 TRAV17A0A0B4J275 112 aa0.51□□□□□ -2.33
SCFD1-217ENST00000555953 TRBV30A0A0K0K1B3 111 aa0.51□□□□□ -2.33
SCFD1-217ENST00000555953 IGF2P01344 180 aa0.51□□□□□ -2.33
SCFD1-217ENST00000555953 DBIP07108 87 aaKnown RBP0.51□□□□□ -2.33
SCFD1-217ENST00000555953 PTPRGP23470 1445 aa0.51□□□□□ -2.33
SCFD1-217ENST00000555953 CCDC171Q6TFL3 1326 aa0.51□□□□□ -2.33
SCFD1-217ENST00000555953 Q6ZQY7 126 aa0.51□□□□□ -2.33
SCFD1-217ENST00000555953 SNX29P2Q8IUI4 249 aa0.51□□□□□ -2.33
SCFD1-217ENST00000555953 TCTEX1D1Q8N7M0 179 aa0.51□□□□□ -2.33
SCFD1-217ENST00000555953 OR4S1Q8NGB4 309 aa0.51□□□□□ -2.33
SCFD1-217ENST00000555953 SMIM7Q9BQ49 75 aa0.51□□□□□ -2.33
SCFD1-217ENST00000555953 MRPL36Q9P0J6 103 aaKnown RBP0.51□□□□□ -2.33
SCFD1-217ENST00000555953 ATG2AQ2TAZ0 1938 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 PTPRMP28827 1452 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 BBIP1A8MTZ0 92 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 ZNF670-ZNF695F2Z2N8 137 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 NPFFO15130 113 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 SMIM24O75264 130 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 LY6G6CO95867 125 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 TSPAN19P0C672 248 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 HIST1H1BP16401 226 aaKnown RBP0.5□□□□□ -2.33
SCFD1-217ENST00000555953 ETV6P41212 452 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 RPS25P62851 125 aaKnown RBP0.5□□□□□ -2.33
SCFD1-217ENST00000555953 CCSMST1Q4G0I0 132 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 SLC25A26Q70HW3 274 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 KRTAP19-3Q7Z4W3 81 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 ATOH7Q8N100 152 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 SDF2Q99470 211 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 CCL19Q99731 98 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 C10orf95Q9H7T3 257 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 COPZ2Q9P299 210 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 KIDINS220Q9ULH0 1771 aa0.5□□□□□ -2.33
SCFD1-217ENST00000555953 ZCCHC6Q5VYS8 1495 aaKnown RBP0.49□□□□□ -2.33
SCFD1-217ENST00000555953 MUC5BQ9HC84 5762 aaPredicted RBP0.49□□□□□ -2.33
SCFD1-217ENST00000555953 CXorf51AA0A1B0GTR3 108 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 LOC100130705A0A1B0GUX0 176 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 TMEM30CPA0ZSE6 113 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 IFITM5A6NNB3 132 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 K7ERU9 68 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 M0R2Z0 102 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 SULT1C4O75897 302 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 IGHV3-30P01768 117 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 IGHV3-30-5P0DP03 117 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 SLC25A6P12236 298 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 COX4I1P13073 169 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 EVI2AP22794 236 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 FXYD3Q14802 87 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 ZNF56Q15929 161 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 SPINK9Q5DT21 86 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 CTAGE3PQ8IX95 158 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 C5orf56Q8N8D9 126 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 TPT1P8Q9HAU6 139 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 ERG28Q9UKR5 140 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 KNTC1P50748 2209 aa0.49□□□□□ -2.33
SCFD1-217ENST00000555953 KCPQ6ZWJ8 1503 aa0.48□□□□□ -2.33
SCFD1-217ENST00000555953 OVOS2A0A0J9YW53 1432 aa0.48□□□□□ -2.33
SCFD1-217ENST00000555953 OVOS2Q6IE36 1432 aa0.48□□□□□ -2.33
SCFD1-217ENST00000555953 IBTKQ9P2D0 1353 aaPredicted RBP0.48□□□□□ -2.33
SCFD1-217ENST00000555953 CASZ1Q86V15 1759 aa0.48□□□□□ -2.33
SCFD1-217ENST00000555953 A0A0G2JMM0 328 aa0.48□□□□□ -2.33
SCFD1-217ENST00000555953 M0R2P5 195 aa0.48□□□□□ -2.33
SCFD1-217ENST00000555953 GNG7O60262 68 aa0.48□□□□□ -2.33
SCFD1-217ENST00000555953 TPST1O60507 370 aa0.48□□□□□ -2.33
SCFD1-217ENST00000555953 HMGN1P05114 100 aa0.48□□□□□ -2.33
SCFD1-217ENST00000555953 FXYD6P3P58550 94 aa0.48□□□□□ -2.33
SCFD1-217ENST00000555953 DNAJB13P59910 316 aa0.48□□□□□ -2.33
SCFD1-217ENST00000555953 NPC2P61916 151 aa0.48□□□□□ -2.33
SCFD1-217ENST00000555953 RRAS2P62070 204 aaPredicted RBP0.48□□□□□ -2.33
SCFD1-217ENST00000555953 LSM3P62310 102 aaKnown RBP0.48□□□□□ -2.33
SCFD1-217ENST00000555953 S100A12P80511 92 aa0.48□□□□□ -2.33
SCFD1-217ENST00000555953 RHOHQ15669 191 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms