RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 KRTAP29-1A8MX34 341 aaPredicted RBP12.95□□□□□ -0.34
FOXN3-211ENST00000555855 IGHV3-30P01768 117 aa12.95□□□□□ -0.34
FOXN3-211ENST00000555855 IGHV3-33P01772 117 aa12.95□□□□□ -0.34
FOXN3-211ENST00000555855 H2AFB2P0C5Z0 115 aa12.95□□□□□ -0.34
FOXN3-211ENST00000555855 IGHV3-30-3P0DP02 117 aa12.95□□□□□ -0.34
FOXN3-211ENST00000555855 IGHV3-30-5P0DP03 117 aa12.95□□□□□ -0.34
FOXN3-211ENST00000555855 DEFB104AQ8WTQ1 72 aa12.95□□□□□ -0.34
FOXN3-211ENST00000555855 TMED6Q8WW62 240 aa12.95□□□□□ -0.34
FOXN3-211ENST00000555855 HYLS1Q96M11 299 aa12.95□□□□□ -0.34
FOXN3-211ENST00000555855 DNAH8Q96JB1 4490 aa12.95□□□□□ -0.34
FOXN3-211ENST00000555855 TRAV21A0A0B4J279 112 aa12.94□□□□□ -0.34
FOXN3-211ENST00000555855 FBLL1A6NHQ2 334 aaKnown RBP12.94□□□□□ -0.34
FOXN3-211ENST00000555855 CIDEAO60543 219 aa12.94□□□□□ -0.34
FOXN3-211ENST00000555855 UBE2L3P68036 154 aaKnown RBP12.94□□□□□ -0.34
FOXN3-211ENST00000555855 CMTM2Q8TAZ6 248 aa12.94□□□□□ -0.34
FOXN3-211ENST00000555855 KCNS1Q96KK3 526 aa12.94□□□□□ -0.34
FOXN3-211ENST00000555855 FAM74A1Q5RGS3 127 aa12.93□□□□□ -0.34
FOXN3-211ENST00000555855 WDR61Q9GZS3 305 aaKnown RBP12.93□□□□□ -0.34
FOXN3-211ENST00000555855 RBM38Q9H0Z9 239 aaKnown RBP12.93□□□□□ -0.34
FOXN3-211ENST00000555855 SDF2L1Q9HCN8 221 aa12.93□□□□□ -0.34
FOXN3-211ENST00000555855 TAS2R45P59539 299 aa12.92□□□□□ -0.34
FOXN3-211ENST00000555855 LELP1Q5T871 98 aa12.92□□□□□ -0.34
FOXN3-211ENST00000555855 LINC00528Q8N1L1 170 aa12.92□□□□□ -0.34
FOXN3-211ENST00000555855 SLC25A29Q8N8R3 303 aa12.92□□□□□ -0.34
FOXN3-211ENST00000555855 NMES1Q9C002 83 aa12.92□□□□□ -0.34
FOXN3-211ENST00000555855 PGPA6NDG6 321 aa12.91□□□□□ -0.34
FOXN3-211ENST00000555855 TYMSP04818 313 aa12.91□□□□□ -0.34
FOXN3-211ENST00000555855 LAGE3Q14657 143 aa12.91□□□□□ -0.34
FOXN3-211ENST00000555855 RHOHQ15669 191 aa12.91□□□□□ -0.34
FOXN3-211ENST00000555855 SERTAD4-AS1Q5TG53 156 aa12.91□□□□□ -0.34
FOXN3-211ENST00000555855 SH3BGRL3Q9H299 93 aa12.91□□□□□ -0.34
FOXN3-211ENST00000555855 RPH3ALQ9UNE2 315 aa12.91□□□□□ -0.34
FOXN3-211ENST00000555855 TRBV6-4A0A1B0GX49 114 aa12.9□□□□□ -0.34
FOXN3-211ENST00000555855 ZNF876PQ49A33 203 aa12.9□□□□□ -0.34
FOXN3-211ENST00000555855 KHDC3LQ587J8 217 aa12.9□□□□□ -0.34
FOXN3-211ENST00000555855 SYT8Q8NBV8 401 aa12.9□□□□□ -0.34
FOXN3-211ENST00000555855 ATP6V0E2Q8NHE4 81 aa12.9□□□□□ -0.34
FOXN3-211ENST00000555855 ASB13Q8WXK3 278 aa12.9□□□□□ -0.34
FOXN3-211ENST00000555855 GTSF1LQ9H1H1 148 aa12.9□□□□□ -0.34
FOXN3-211ENST00000555855 TREM1Q9NP99 234 aa12.9□□□□□ -0.34
FOXN3-211ENST00000555855 OTORQ9NRC9 128 aa12.9□□□□□ -0.34
FOXN3-211ENST00000555855 FFAR4Q5NUL3 377 aa12.89□□□□□ -0.35
FOXN3-211ENST00000555855 MBD2Q9UBB5 411 aa12.89□□□□□ -0.35
FOXN3-211ENST00000555855 TRAV8-3A0A0A6YYJ7 113 aa12.88□□□□□ -0.35
FOXN3-211ENST00000555855 FAM240BA0A1B0GVZ2 78 aa12.88□□□□□ -0.35
FOXN3-211ENST00000555855 RS1O15537 224 aa12.88□□□□□ -0.35
FOXN3-211ENST00000555855 Q6ZSA8 131 aa12.88□□□□□ -0.35
FOXN3-211ENST00000555855 GOLT1AQ6ZVE7 132 aa12.88□□□□□ -0.35
FOXN3-211ENST00000555855 ARL6IP6Q8N6S5 226 aa12.88□□□□□ -0.35
FOXN3-211ENST00000555855 IGHV3-73A0A0B4J1V6 119 aa12.87□□□□□ -0.35
FOXN3-211ENST00000555855 F6UZH7 168 aa12.87□□□□□ -0.35
FOXN3-211ENST00000555855 TOR2AQ5JU69 321 aa12.87□□□□□ -0.35
FOXN3-211ENST00000555855 CFAP126Q5VTH2 177 aa12.87□□□□□ -0.35
FOXN3-211ENST00000555855 SCGB1C1Q8TD33 95 aa12.87□□□□□ -0.35
FOXN3-211ENST00000555855 OR5AC2Q9NZP5 309 aa12.87□□□□□ -0.35
FOXN3-211ENST00000555855 LRRC37A5PQ49AS3 106 aa12.86□□□□□ -0.35
FOXN3-211ENST00000555855 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.85□□□□□ -0.35
FOXN3-211ENST00000555855 LECT2O14960 151 aa12.85□□□□□ -0.35
FOXN3-211ENST00000555855 SIX6O95475 246 aa12.85□□□□□ -0.35
FOXN3-211ENST00000555855 CYCSP99999 105 aaKnown RBP12.85□□□□□ -0.35
FOXN3-211ENST00000555855 WFDC2Q14508 124 aa12.85□□□□□ -0.35
FOXN3-211ENST00000555855 NDFIP1Q9BT67 221 aa12.85□□□□□ -0.35
FOXN3-211ENST00000555855 COX11Q9Y6N1 276 aa12.85□□□□□ -0.35
FOXN3-211ENST00000555855 MGST1P10620 155 aaKnown RBP12.84□□□□□ -0.35
FOXN3-211ENST00000555855 MZT2BQ6NZ67 158 aa12.84□□□□□ -0.35
FOXN3-211ENST00000555855 TVP23CQ96ET8 276 aa12.84□□□□□ -0.35
FOXN3-211ENST00000555855 TRAV8-1A0A0A6YYK1 113 aa12.83□□□□□ -0.36
FOXN3-211ENST00000555855 GGTLC3B5MD39 225 aa12.83□□□□□ -0.36
FOXN3-211ENST00000555855 H0YIZ8 118 aa12.83□□□□□ -0.36
FOXN3-211ENST00000555855 TAAR5O14804 337 aa12.83□□□□□ -0.36
FOXN3-211ENST00000555855 DPPA3Q6W0C5 159 aa12.83□□□□□ -0.36
FOXN3-211ENST00000555855 A0A1W2PPV4 95 aa12.82□□□□□ -0.36
FOXN3-211ENST00000555855 RBFOX3A6NFN3 312 aa12.82□□□□□ -0.36
FOXN3-211ENST00000555855 PQLC2Q6ZP29 291 aa12.82□□□□□ -0.36
FOXN3-211ENST00000555855 BAALCQ8WXS3 180 aa12.82□□□□□ -0.36
FOXN3-211ENST00000555855 EIF3GO75821 320 aaKnown RBP eCLIP12.81□□□□□ -0.36
FOXN3-211ENST00000555855 ASAH1Q13510 395 aa12.81□□□□□ -0.36
FOXN3-211ENST00000555855 Q8N976 141 aa12.81□□□□□ -0.36
FOXN3-211ENST00000555855 PTH2Q96A98 100 aa12.81□□□□□ -0.36
FOXN3-211ENST00000555855 RMI2Q96E14 147 aa12.81□□□□□ -0.36
FOXN3-211ENST00000555855 CCDC32Q9BV29 185 aa12.81□□□□□ -0.36
FOXN3-211ENST00000555855 PGPEP1LA6NFU8 196 aa12.8□□□□□ -0.36
FOXN3-211ENST00000555855 OXTP01178 125 aa12.8□□□□□ -0.36
FOXN3-211ENST00000555855 ACOT6Q3I5F7 207 aaPredicted RBP12.8□□□□□ -0.36
FOXN3-211ENST00000555855 SCXQ7RTU7 201 aa12.8□□□□□ -0.36
FOXN3-211ENST00000555855 DAZ4Q86SG3 579 aaKnown RBP12.8□□□□□ -0.36
FOXN3-211ENST00000555855 SGK494Q96LW2 274 aa12.8□□□□□ -0.36
FOXN3-211ENST00000555855 DAZ3Q9NR90 486 aaKnown RBP12.8□□□□□ -0.36
FOXN3-211ENST00000555855 A0A087WWC5 75 aa12.79□□□□□ -0.36
FOXN3-211ENST00000555855 SERTM2A0A1B0GWG4 89 aa12.79□□□□□ -0.36
FOXN3-211ENST00000555855 GAGE12JA6NER3 117 aa12.79□□□□□ -0.36
FOXN3-211ENST00000555855 K7EQM0 130 aa12.79□□□□□ -0.36
FOXN3-211ENST00000555855 GNG5P63218 68 aa12.79□□□□□ -0.36
FOXN3-211ENST00000555855 GAGE1Q13065 139 aa12.79□□□□□ -0.36
FOXN3-211ENST00000555855 GAGE4Q13068 117 aa12.79□□□□□ -0.36
FOXN3-211ENST00000555855 GAGE5Q13069 117 aa12.79□□□□□ -0.36
FOXN3-211ENST00000555855 LINC01620Q4KN68 170 aa12.79□□□□□ -0.36
FOXN3-211ENST00000555855 GAGE13Q4V321 117 aa12.79□□□□□ -0.36
FOXN3-211ENST00000555855 ZNF506Q5JVG8 444 aa12.79□□□□□ -0.36
FOXN3-211ENST00000555855 Q8N3U1 123 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms