RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 RBAKDNA6NC62 111 aa6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 DIRC3C9JPN6 131 aa6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 GPX1P07203 203 aa6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 RAB5CP51148 216 aa6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 RANP62826 216 aaKnown RBP6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 ZNF266Q14584 549 aa6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 KHDC3LQ587J8 217 aa6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 SOHLH1Q5JUK2 328 aa6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 MUC21Q5SSG8 566 aa6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 Q6AWC8 147 aa6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 ALKAL2Q6UX46 152 aa6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 TVP23CQ96ET8 276 aa6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 KRTAP4-5Q9BYR2 181 aa6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 Q9H8V8 135 aa6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 MDFICQ9P1T7 246 aa6.4□□□□□ -1.38
VIPAS39-207ENST00000555854 TRGV2A0A075B6R0 118 aa6.39□□□□□ -1.39
VIPAS39-207ENST00000555854 BORCS7-ASMTA0A0B4J1R7 106 aa6.39□□□□□ -1.39
VIPAS39-207ENST00000555854 FAM229AH3BQW9 127 aa6.39□□□□□ -1.39
VIPAS39-207ENST00000555854 IGHV3-53P01767 116 aa6.39□□□□□ -1.39
VIPAS39-207ENST00000555854 LYPD1Q8N2G4 141 aa6.39□□□□□ -1.39
VIPAS39-207ENST00000555854 SMDT1Q9H4I9 107 aa6.39□□□□□ -1.39
VIPAS39-207ENST00000555854 TRAV8-1A0A0A6YYK1 113 aa6.38□□□□□ -1.39
VIPAS39-207ENST00000555854 HMGB3O15347 200 aaKnown RBP6.38□□□□□ -1.39
VIPAS39-207ENST00000555854 IFNA5P01569 189 aa6.38□□□□□ -1.39
VIPAS39-207ENST00000555854 GNG5P63218 68 aa6.38□□□□□ -1.39
VIPAS39-207ENST00000555854 FHL2Q14192 279 aa6.38□□□□□ -1.39
VIPAS39-207ENST00000555854 Q6ZRN7 208 aaPredicted RBP6.38□□□□□ -1.39
VIPAS39-207ENST00000555854 OTORQ9NRC9 128 aa6.38□□□□□ -1.39
VIPAS39-207ENST00000555854 F6UZH7 168 aa6.37□□□□□ -1.39
VIPAS39-207ENST00000555854 SFTA3P0C7M3 94 aa6.37□□□□□ -1.39
VIPAS39-207ENST00000555854 SEC11BP0C7V7 166 aa6.37□□□□□ -1.39
VIPAS39-207ENST00000555854 CRYBA4P53673 196 aa6.37□□□□□ -1.39
VIPAS39-207ENST00000555854 TAS2R45P59539 299 aa6.37□□□□□ -1.39
VIPAS39-207ENST00000555854 ZNF415Q09FC8 603 aa6.37□□□□□ -1.39
VIPAS39-207ENST00000555854 GOLT1AQ6ZVE7 132 aa6.37□□□□□ -1.39
VIPAS39-207ENST00000555854 OR2G3Q8NGZ4 309 aa6.37□□□□□ -1.39
VIPAS39-207ENST00000555854 SCGB1C1Q8TD33 95 aa6.37□□□□□ -1.39
VIPAS39-207ENST00000555854 TMED6Q8WW62 240 aa6.37□□□□□ -1.39
VIPAS39-207ENST00000555854 ZNF479Q96JC4 524 aa6.37□□□□□ -1.39
VIPAS39-207ENST00000555854 C8orf49Q96NF6 230 aa6.37□□□□□ -1.39
VIPAS39-207ENST00000555854 RPH3ALQ9UNE2 315 aa6.37□□□□□ -1.39
VIPAS39-207ENST00000555854 LENEPQ9Y5L5 61 aa6.37□□□□□ -1.39
VIPAS39-207ENST00000555854 A0A1W2PPQ1 181 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 PGPA6NDG6 321 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 C16orf90A8MZG2 172 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 STAG3L2P0CL84 134 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 STAG3L3P0CL85 134 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 ARL14EPLP0DKL9 152 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 CSN1S1P47710 185 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 SULT1A2P50226 295 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 LINC00315P59091 139 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 KRTAP10-2P60368 255 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 TMEM183BQ1AE95 376 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 ACOT6Q3I5F7 207 aaPredicted RBP6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 TDRG1Q3Y452 100 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 TTC32Q5I0X7 151 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 PQLC2Q6ZP29 291 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 TMEM183AQ8IXX5 376 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 SVBPQ8N300 66 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 HSD17B11Q8NBQ5 300 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 SH3BGRL3Q9H299 93 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 CYTL1Q9NRR1 136 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 C11orf21Q9P2W6 132 aa6.36□□□□□ -1.39
VIPAS39-207ENST00000555854 MYCBP2O75592 4640 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 IGHV3-16A0A0C4DH30 117 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 GGTLC3B5MD39 225 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 UMAD1C9J7I0 102 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 PAX4O43316 350 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 NXPH4O95158 308 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 TYMSP04818 313 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 ATP6V0CP27449 155 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 CDC34P49427 236 aaPredicted RBP6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 ZNF80P51504 273 aaPredicted RBP6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 C10orf91Q5T1B1 145 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 OR10G4Q8NGN3 311 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 OR10G9Q8NGN4 311 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 OR10G7Q8NGN6 311 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 RASL10AQ92737 203 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 SGK494Q96LW2 274 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 PRO0255Q9UI72 69 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 NAGKQ9UJ70 344 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 ICOSQ9Y6W8 199 aa6.35□□□□□ -1.39
VIPAS39-207ENST00000555854 TRGV11A0A075B6L2 103 aa6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 LOC100131303A0A0U1RQF7 123 aa6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 TMEM218A2RU14 115 aa6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 GNRH2O43555 120 aa6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 SNAPINO95295 136 aa6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 IGLV2-11P01706 119 aa6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 BTF3P20290 206 aaKnown RBP6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 GCHFRP30047 84 aa6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 ZNF726P1Q15940 193 aa6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 SPATA12Q7Z6I5 190 aa6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 LYPD6BQ8NI32 183 aa6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 RAB24Q969Q5 203 aa6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 PSMG3Q9BT73 122 aaPredicted RBP6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 SEC11CQ9BY50 192 aa6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 CARHSP1Q9Y2V2 147 aaKnown RBP6.34□□□□□ -1.39
VIPAS39-207ENST00000555854 A0A1W2PPV4 95 aa6.33□□□□□ -1.4
VIPAS39-207ENST00000555854 K7EQD1 137 aa6.33□□□□□ -1.4
VIPAS39-207ENST00000555854 CDK2AP2O75956 126 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms