RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 TBL1YQ9BQ87 522 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 SEC11CQ9BY50 192 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 C11orf68Q9H3H3 251 aaKnown RBP2.11□□□□□ -2.07
SRP54-209ENST00000555746 CA10Q9NS85 328 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 CKLFQ9UBR5 152 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 UQCR10Q9UDW1 63 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 MRPS16Q9Y3D3 137 aaKnown RBP2.11□□□□□ -2.07
SRP54-209ENST00000555746 HECTD4Q9Y4D8 3996 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 NUP214P35658 2090 aaPredicted RBP2.1□□□□□ -2.07
SRP54-209ENST00000555746 TRAV27A0A087WT01 109 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 A0A0D9SG52 128 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 A0A0J9YXV3 536 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 FAM236AA0A1B0GUQ0 79 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 FAM236BA0A1B0GV22 79 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 DPRXA6NFQ7 191 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 OR2T8A6NH00 312 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 A8MWV9 139 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 TMEM262E9PQX1 116 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 PEX7O00628 323 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 UBE2L6O14933 153 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 NAPSAO96009 420 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 MT-ND6P03923 174 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 NMBP08949 121 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 CTSEP14091 401 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 SRP14P37108 136 aaKnown RBP2.1□□□□□ -2.07
SRP54-209ENST00000555746 SNCAP37840 140 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 PSMB3P49720 205 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 ZNF83P51522 516 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 NCBP2P52298 156 aaKnown RBP eCLIP2.1□□□□□ -2.07
SRP54-209ENST00000555746 FOXA3P55318 350 aaPredicted RBP2.1□□□□□ -2.07
SRP54-209ENST00000555746 RPS21P63220 83 aaKnown RBP2.1□□□□□ -2.07
SRP54-209ENST00000555746 ADIGQ0VDE8 80 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 ERCC8Q13216 396 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 ELOCQ15369 112 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 RRN3P1Q2M238 152 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 FBXL19-AS1Q494R0 122 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 C6orf99Q4VX62 202 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 KPRPQ5T749 579 aaPredicted RBP2.1□□□□□ -2.07
SRP54-209ENST00000555746 C9orf153Q5TBE3 101 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 AADACL3Q5VUY0 350 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 C1orf140Q5VVS0 124 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 TEX43Q6ZNM6 134 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 AAED1Q7RTV5 226 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 LINC00305Q7Z4B0 112 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 WDR86Q86TI4 376 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 TMEM183AQ8IXX5 376 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 C1orf174Q8IYL3 243 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 SAXO1Q8IYX7 474 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 C10orf126Q8N4M7 172 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 ZIC4Q8N9L1 334 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 TMEM75Q8N9X5 138 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 LINC00301Q8NCQ3 95 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 OR4B1Q8NGF8 309 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 OR5D16Q8NGK9 328 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 MRPL30Q8TCC3 161 aaKnown RBP2.1□□□□□ -2.07
SRP54-209ENST00000555746 TWIST2Q8WVJ9 160 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 C10orf82Q8WW14 230 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 GEMIN6Q8WXD5 167 aaKnown RBP2.1□□□□□ -2.07
SRP54-209ENST00000555746 DPH3Q96FX2 82 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 C2orf50Q96LR7 162 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 YPEL4Q96NS1 127 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 AQP10Q96PS8 301 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 TM2D3Q9BRN9 247 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 NAA60Q9H7X0 242 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 OTORQ9NRC9 128 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 TMEM106BQ9NUM4 274 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 CHCHD2Q9Y6H1 151 aaPredicted RBP2.1□□□□□ -2.07
SRP54-209ENST00000555746 DSPPQ9NZW4 1301 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 OBSCNQ5VST9 7968 aa2.1□□□□□ -2.07
SRP54-209ENST00000555746 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.09□□□□□ -2.07
SRP54-209ENST00000555746 SMIM26A0A096LP01 95 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 IGHV1-69DA0A0B4J2H0 117 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 IGHV1-58A0A0C4DH39 117 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 M0R381 172 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 GEMIN2O14893 280 aaKnown RBP2.09□□□□□ -2.07
SRP54-209ENST00000555746 UQCRQO14949 82 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 COX7A2P2O60397 106 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 CST7O76096 145 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 STATHP02808 62 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 SCGB1C2P0DMR2 95 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 IGHV3-43DP0DP04 118 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 PYYP10082 97 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 FABP2P12104 132 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 LGALS3P17931 250 aaKnown RBP2.09□□□□□ -2.07
SRP54-209ENST00000555746 RPL22P35268 128 aaKnown RBP2.09□□□□□ -2.07
SRP54-209ENST00000555746 NMUP48645 174 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 ZNF90Q03938 601 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 ATP5G2Q06055 141 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 Q6AWC8 147 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 C22orf39Q6P5X5 142 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 UNQ5815/PRO19632Q6UWF5 114 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 Q6ZUT4 128 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 FAM19A3Q7Z5A8 133 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 ATOH7Q8N100 152 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 LINC00471Q8N535 108 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 C3orf22Q8N5N4 141 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 OR4X2Q8NGF9 303 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 ATP6V0E2Q8NHE4 81 aa2.09□□□□□ -2.07
SRP54-209ENST00000555746 SCGB1C1Q8TD33 95 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms