RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 CBY1Q9Y3M2 126 aa18.34■□□□□ 0.53
TMEM260-207ENST00000555497 TRAV9-2A0A087WT02 112 aa18.33■□□□□ 0.53
TMEM260-207ENST00000555497 TMEM89A2RUT3 159 aa18.33■□□□□ 0.52
TMEM260-207ENST00000555497 KIR3DS1Q14943 382 aa18.32■□□□□ 0.52
TMEM260-207ENST00000555497 OR8A1Q8NGG7 326 aa18.32■□□□□ 0.52
TMEM260-207ENST00000555497 FAM19A4Q96LR4 140 aa18.32■□□□□ 0.52
TMEM260-207ENST00000555497 OR4C46A6NHA9 309 aa18.31■□□□□ 0.52
TMEM260-207ENST00000555497 IGLL1P15814 213 aa18.31■□□□□ 0.52
TMEM260-207ENST00000555497 Q6ZN92 141 aa18.31■□□□□ 0.52
TMEM260-207ENST00000555497 ZNF747Q9BV97 191 aa18.31■□□□□ 0.52
TMEM260-207ENST00000555497 HSPB8Q9UJY1 196 aa18.31■□□□□ 0.52
TMEM260-207ENST00000555497 FXYD7P58549 80 aa18.3■□□□□ 0.52
TMEM260-207ENST00000555497 KLHDC1Q8N7A1 406 aa18.3■□□□□ 0.52
TMEM260-207ENST00000555497 STPG4Q8N801 248 aa18.3■□□□□ 0.52
TMEM260-207ENST00000555497 MAP1LC3CQ9BXW4 147 aa18.3■□□□□ 0.52
TMEM260-207ENST00000555497 LAMTOR2Q9Y2Q5 125 aa18.3■□□□□ 0.52
TMEM260-207ENST00000555497 EVI2AP22794 236 aa18.3■□□□□ 0.52
TMEM260-207ENST00000555497 HNRNPA3P51991 378 aaKnown RBP18.3■□□□□ 0.52
TMEM260-207ENST00000555497 GATA1P15976 413 aaPredicted RBP18.29■□□□□ 0.52
TMEM260-207ENST00000555497 DCANP1Q8TF63 244 aa18.29■□□□□ 0.52
TMEM260-207ENST00000555497 DUX5Q96PT3 197 aa18.29■□□□□ 0.52
TMEM260-207ENST00000555497 ZNF469Q96JG9 3925 aaPredicted RBP18.29■□□□□ 0.52
TMEM260-207ENST00000555497 H0Y8G0 127 aa18.29■□□□□ 0.52
TMEM260-207ENST00000555497 WFDC3Q8IUB2 231 aa18.29■□□□□ 0.52
TMEM260-207ENST00000555497 UFC1Q9Y3C8 167 aa18.29■□□□□ 0.52
TMEM260-207ENST00000555497 H3BVH4 76 aa18.28■□□□□ 0.52
TMEM260-207ENST00000555497 SNAI2O43623 268 aa18.28■□□□□ 0.52
TMEM260-207ENST00000555497 MYOZ3Q8TDC0 251 aa18.28■□□□□ 0.52
TMEM260-207ENST00000555497 NBPF19A0A087WUL8 3843 aa18.28■□□□□ 0.52
TMEM260-207ENST00000555497 HIST2H2BCQ6DN03 193 aa18.27■□□□□ 0.52
TMEM260-207ENST00000555497 PET117Q6UWS5 81 aa18.27■□□□□ 0.52
TMEM260-207ENST00000555497 SPRY2O43597 315 aa18.27■□□□□ 0.52
TMEM260-207ENST00000555497 TCF21O43680 179 aa18.27■□□□□ 0.52
TMEM260-207ENST00000555497 TENM4Q6N022 2769 aa18.26■□□□□ 0.51
TMEM260-207ENST00000555497 RNASE4P34096 147 aaKnown RBP18.26■□□□□ 0.51
TMEM260-207ENST00000555497 PMCHL2Q9BQD1 86 aa18.26■□□□□ 0.51
TMEM260-207ENST00000555497 TRAV21A0A0B4J279 112 aa18.26■□□□□ 0.51
TMEM260-207ENST00000555497 PPBPP02775 128 aa18.26■□□□□ 0.51
TMEM260-207ENST00000555497 IGHV4-4A0A075B6R2 117 aa18.25■□□□□ 0.51
TMEM260-207ENST00000555497 IGHV4OR15-8A0A075B7B6 117 aa18.25■□□□□ 0.51
TMEM260-207ENST00000555497 A0A087WW49 117 aa18.25■□□□□ 0.51
TMEM260-207ENST00000555497 hDV102S1A0JD36 115 aa18.25■□□□□ 0.51
TMEM260-207ENST00000555497 ELANEP08246 267 aa18.25■□□□□ 0.51
TMEM260-207ENST00000555497 LGALS1P09382 135 aaKnown RBP18.25■□□□□ 0.51
TMEM260-207ENST00000555497 APRG1Q8IVJ8 170 aa18.25■□□□□ 0.51
TMEM260-207ENST00000555497 TNFRSF6BO95407 300 aa18.25■□□□□ 0.51
TMEM260-207ENST00000555497 SYNJ2BPP57105 145 aa18.25■□□□□ 0.51
TMEM260-207ENST00000555497 ORAOV1Q8WV07 137 aa18.25■□□□□ 0.51
TMEM260-207ENST00000555497 MRPS16Q9Y3D3 137 aaKnown RBP18.25■□□□□ 0.51
TMEM260-207ENST00000555497 TLN2Q9Y4G6 2542 aa18.24■□□□□ 0.51
TMEM260-207ENST00000555497 C20orf202A1L168 122 aa18.24■□□□□ 0.51
TMEM260-207ENST00000555497 ANXA2RQ3ZCQ2 193 aa18.24■□□□□ 0.51
TMEM260-207ENST00000555497 LINC01545Q5VT33 79 aa18.24■□□□□ 0.51
TMEM260-207ENST00000555497 TSPOP30536 169 aa18.23■□□□□ 0.51
TMEM260-207ENST00000555497 SPANXN1Q5VSR9 72 aa18.23■□□□□ 0.51
TMEM260-207ENST00000555497 MS4A6AQ9H2W1 248 aa18.23■□□□□ 0.51
TMEM260-207ENST00000555497 ITPR3Q14573 2671 aa18.23■□□□□ 0.51
TMEM260-207ENST00000555497 MAP1LC3AQ9H492 121 aa18.22■□□□□ 0.51
TMEM260-207ENST00000555497 WFDC12Q8WWY7 111 aa18.22■□□□□ 0.51
TMEM260-207ENST00000555497 TRAV26-2A0A0B4J265 109 aa18.21■□□□□ 0.51
TMEM260-207ENST00000555497 ID1P41134 155 aa18.21■□□□□ 0.51
TMEM260-207ENST00000555497 CACNG7P62955 275 aa18.21■□□□□ 0.51
TMEM260-207ENST00000555497 C18orf65Q6ZTR6 163 aa18.21■□□□□ 0.51
TMEM260-207ENST00000555497 RNF152Q8N8N0 203 aa18.21■□□□□ 0.51
TMEM260-207ENST00000555497 WFDC11Q8NEX6 87 aa18.21■□□□□ 0.51
TMEM260-207ENST00000555497 UBE2E2Q96LR5 201 aa18.21■□□□□ 0.51
TMEM260-207ENST00000555497 TP73-AS1Q9UF72 201 aa18.21■□□□□ 0.51
TMEM260-207ENST00000555497 CHD6Q8TD26 2715 aa18.21■□□□□ 0.51
TMEM260-207ENST00000555497 GNRH2O43555 120 aa18.21■□□□□ 0.5
TMEM260-207ENST00000555497 TRBV7-9A0A0J9YWB2 115 aa18.2■□□□□ 0.5
TMEM260-207ENST00000555497 LINC01546A6NGU7 62 aa18.2■□□□□ 0.5
TMEM260-207ENST00000555497 HBDP02042 147 aa18.2■□□□□ 0.5
TMEM260-207ENST00000555497 HOXD3P31249 432 aaPredicted RBP18.2■□□□□ 0.5
TMEM260-207ENST00000555497 ZNF688P0C7X2 276 aa18.19■□□□□ 0.5
TMEM260-207ENST00000555497 KLLNB2CW77 178 aa18.18■□□□□ 0.5
TMEM260-207ENST00000555497 SMIM15Q7Z3B0 74 aa18.18■□□□□ 0.5
TMEM260-207ENST00000555497 Q8N2B8 174 aa18.18■□□□□ 0.5
TMEM260-207ENST00000555497 NRACQ8N912 160 aa18.18■□□□□ 0.5
TMEM260-207ENST00000555497 OR2K2Q8NGT1 345 aa18.18■□□□□ 0.5
TMEM260-207ENST00000555497 LGALS9O00182 355 aa18.18■□□□□ 0.5
TMEM260-207ENST00000555497 M0R381 172 aa18.17■□□□□ 0.5
TMEM260-207ENST00000555497 CCL25O15444 150 aa18.17■□□□□ 0.5
TMEM260-207ENST00000555497 ASIPP42127 132 aa18.17■□□□□ 0.5
TMEM260-207ENST00000555497 HINT1P49773 126 aaPredicted RBP18.17■□□□□ 0.5
TMEM260-207ENST00000555497 PSMG4Q5JS54 123 aa18.17■□□□□ 0.5
TMEM260-207ENST00000555497 ST20Q9HBF5 79 aa18.17■□□□□ 0.5
TMEM260-207ENST00000555497 SORL1Q92673 2214 aa18.17■□□□□ 0.5
TMEM260-207ENST00000555497 IGLV2-18A0A075B6J9 118 aa18.17■□□□□ 0.5
TMEM260-207ENST00000555497 K7EQG2 157 aa18.17■□□□□ 0.5
TMEM260-207ENST00000555497 S100A4P26447 101 aaKnown RBP18.17■□□□□ 0.5
TMEM260-207ENST00000555497 AGRNO00468 2067 aa18.17■□□□□ 0.5
TMEM260-207ENST00000555497 RNASE3P12724 160 aaKnown RBP18.16■□□□□ 0.5
TMEM260-207ENST00000555497 PTTG1IPP53801 180 aa18.16■□□□□ 0.5
TMEM260-207ENST00000555497 DEFB136Q30KP8 78 aa18.16■□□□□ 0.5
TMEM260-207ENST00000555497 SAMD13Q5VXD3 122 aa18.16■□□□□ 0.5
TMEM260-207ENST00000555497 SCRT2Q9NQ03 307 aa18.16■□□□□ 0.5
TMEM260-207ENST00000555497 SONP18583 2426 aaKnown RBP18.16■□□□□ 0.5
TMEM260-207ENST00000555497 ADAMTSL5Q6ZMM2 481 aa18.15■□□□□ 0.5
TMEM260-207ENST00000555497 NXT2Q9NPJ8 142 aaKnown RBP18.15■□□□□ 0.5
TMEM260-207ENST00000555497 COX11Q9Y6N1 276 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms