RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 PPP3R2Q96LZ3 170 aa2.48□□□□□ -2.01
VRK1-203ENST00000555067 QRICH2Q9H0J4 1663 aa2.47□□□□□ -2.01
VRK1-203ENST00000555067 EML5Q05BV3 1969 aa2.47□□□□□ -2.01
VRK1-203ENST00000555067 MDC1Q14676 2089 aaKnown RBP2.47□□□□□ -2.01
VRK1-203ENST00000555067 C10orf55Q5SWW7 151 aa2.47□□□□□ -2.01
VRK1-203ENST00000555067 TEX261Q6UWH6 196 aa2.47□□□□□ -2.01
VRK1-203ENST00000555067 AGPAT4-IT1Q9H0P7 198 aa2.47□□□□□ -2.01
VRK1-203ENST00000555067 FREM1Q5H8C1 2179 aa2.47□□□□□ -2.01
VRK1-203ENST00000555067 AKAP11Q9UKA4 1901 aa2.46□□□□□ -2.02
VRK1-203ENST00000555067 CFTRP13569 1480 aa2.46□□□□□ -2.02
VRK1-203ENST00000555067 ANK1P16157 1881 aa2.46□□□□□ -2.02
VRK1-203ENST00000555067 CNTLNQ9NXG0 1405 aa2.46□□□□□ -2.02
VRK1-203ENST00000555067 ICE1Q9Y2F5 2266 aa2.46□□□□□ -2.02
VRK1-203ENST00000555067 RNASE3P12724 160 aaKnown RBP2.46□□□□□ -2.02
VRK1-203ENST00000555067 PPP3R1P63098 170 aa2.46□□□□□ -2.02
VRK1-203ENST00000555067 SLC25A26Q70HW3 274 aa2.46□□□□□ -2.02
VRK1-203ENST00000555067 C5orf17Q8NAS9 161 aa2.46□□□□□ -2.02
VRK1-203ENST00000555067 VSTM2AQ8TAG5 236 aa2.46□□□□□ -2.02
VRK1-203ENST00000555067 ZNF431Q8TF32 576 aaPredicted RBP2.46□□□□□ -2.02
VRK1-203ENST00000555067 PATE1Q8WXA2 126 aa2.46□□□□□ -2.02
VRK1-203ENST00000555067 LINC00052Q96N35 136 aa2.46□□□□□ -2.02
VRK1-203ENST00000555067 RERGLQ9H628 205 aa2.46□□□□□ -2.02
VRK1-203ENST00000555067 ZFP30Q9Y2G7 519 aa2.46□□□□□ -2.02
VRK1-203ENST00000555067 STRCP1A6NGW2 1772 aa2.46□□□□□ -2.02
VRK1-203ENST00000555067 PZPP20742 1482 aa2.45□□□□□ -2.02
VRK1-203ENST00000555067 ALPK3Q96L96 1907 aa2.45□□□□□ -2.02
VRK1-203ENST00000555067 F8W1H4 67 aa2.45□□□□□ -2.02
VRK1-203ENST00000555067 CCL16O15467 120 aa2.45□□□□□ -2.02
VRK1-203ENST00000555067 TPPP2P59282 170 aa2.45□□□□□ -2.02
VRK1-203ENST00000555067 BRD3OSQ6XYD6 125 aa2.45□□□□□ -2.02
VRK1-203ENST00000555067 COA5Q86WW8 74 aa2.45□□□□□ -2.02
VRK1-203ENST00000555067 COPS9Q8WXC6 57 aa2.45□□□□□ -2.02
VRK1-203ENST00000555067 LSM10Q969L4 123 aaKnown RBP2.45□□□□□ -2.02
VRK1-203ENST00000555067 NAA60Q9H7X0 242 aa2.45□□□□□ -2.02
VRK1-203ENST00000555067 TAS2R8Q9NYW2 309 aa2.45□□□□□ -2.02
VRK1-203ENST00000555067 PCDH15Q96QU1 1955 aa2.44□□□□□ -2.02
VRK1-203ENST00000555067 LRP5O75197 1615 aa2.44□□□□□ -2.02
VRK1-203ENST00000555067 PRB4P10163 310 aaPredicted RBP2.44□□□□□ -2.02
VRK1-203ENST00000555067 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.44□□□□□ -2.02
VRK1-203ENST00000555067 Q6ZRN7 208 aaPredicted RBP2.44□□□□□ -2.02
VRK1-203ENST00000555067 OR10AG1Q8NH19 301 aa2.44□□□□□ -2.02
VRK1-203ENST00000555067 C4orf3Q8WVX3 66 aa2.44□□□□□ -2.02
VRK1-203ENST00000555067 ORMDL1Q9P0S3 153 aa2.44□□□□□ -2.02
VRK1-203ENST00000555067 PTPRFP10586 1907 aa2.44□□□□□ -2.02
VRK1-203ENST00000555067 CASZ1Q86V15 1759 aa2.44□□□□□ -2.02
VRK1-203ENST00000555067 BCORL1Q5H9F3 1711 aa2.43□□□□□ -2.02
VRK1-203ENST00000555067 COX7CP15954 63 aa2.43□□□□□ -2.02
VRK1-203ENST00000555067 CATR1Q13166 79 aa2.43□□□□□ -2.02
VRK1-203ENST00000555067 DYNLRB2Q8TF09 96 aa2.43□□□□□ -2.02
VRK1-203ENST00000555067 KRTAP4-1Q9BYQ7 146 aa2.43□□□□□ -2.02
VRK1-203ENST00000555067 REG4Q9BYZ8 158 aa2.43□□□□□ -2.02
VRK1-203ENST00000555067 SERP1Q9Y6X1 66 aa2.43□□□□□ -2.02
VRK1-203ENST00000555067 VPS8Q8N3P4 1428 aa2.42□□□□□ -2.02
VRK1-203ENST00000555067 CECR2Q9BXF3 1484 aa2.42□□□□□ -2.02
VRK1-203ENST00000555067 TRBV6-5A0A0K0K1A5 114 aa2.42□□□□□ -2.02
VRK1-203ENST00000555067 KLF7O75840 302 aaPredicted RBP2.42□□□□□ -2.02
VRK1-203ENST00000555067 TNFP01375 233 aa2.42□□□□□ -2.02
VRK1-203ENST00000555067 S100A8P05109 93 aa2.42□□□□□ -2.02
VRK1-203ENST00000555067 IL5P05113 134 aa2.42□□□□□ -2.02
VRK1-203ENST00000555067 IGKV4-1P06312 121 aa2.42□□□□□ -2.02
VRK1-203ENST00000555067 OR2T2Q6IF00 324 aa2.42□□□□□ -2.02
VRK1-203ENST00000555067 KRTAP13-1Q8IUC0 172 aa2.42□□□□□ -2.02
VRK1-203ENST00000555067 CITO14578 2027 aa2.42□□□□□ -2.02
VRK1-203ENST00000555067 CACNA1GO43497 2377 aa2.42□□□□□ -2.02
VRK1-203ENST00000555067 UNC13CQ8NB66 2214 aa2.41□□□□□ -2.02
VRK1-203ENST00000555067 TRAV17A0A0B4J275 112 aa2.41□□□□□ -2.02
VRK1-203ENST00000555067 MCRIP1C9JLW8 97 aa2.41□□□□□ -2.02
VRK1-203ENST00000555067 GEMIN2O14893 280 aaKnown RBP2.41□□□□□ -2.02
VRK1-203ENST00000555067 CCL25O15444 150 aa2.41□□□□□ -2.02
VRK1-203ENST00000555067 PIRTP0C851 137 aa2.41□□□□□ -2.02
VRK1-203ENST00000555067 Q56UQ5 140 aa2.41□□□□□ -2.02
VRK1-203ENST00000555067 FAM74A1Q5RGS3 127 aa2.41□□□□□ -2.02
VRK1-203ENST00000555067 Q6AWC8 147 aa2.41□□□□□ -2.02
VRK1-203ENST00000555067 MRPL54Q6P161 138 aaKnown RBP2.41□□□□□ -2.02
VRK1-203ENST00000555067 TMEM242Q9NWH2 141 aa2.41□□□□□ -2.02
VRK1-203ENST00000555067 COL5A3P25940 1745 aaPredicted RBP2.41□□□□□ -2.02
VRK1-203ENST00000555067 TRBV6-4A0A1B0GX49 114 aa2.4□□□□□ -2.03
VRK1-203ENST00000555067 A0A1W2PRS3 328 aa2.4□□□□□ -2.03
VRK1-203ENST00000555067 H3BRM9 83 aa2.4□□□□□ -2.03
VRK1-203ENST00000555067 Q6ZS92 163 aa2.4□□□□□ -2.03
VRK1-203ENST00000555067 C3orf62Q6ZUJ4 267 aa2.4□□□□□ -2.03
VRK1-203ENST00000555067 GTF2H5Q6ZYL4 71 aa2.4□□□□□ -2.03
VRK1-203ENST00000555067 SPTSSAQ969W0 71 aa2.4□□□□□ -2.03
VRK1-203ENST00000555067 CDC42SE1Q9NRR8 79 aa2.4□□□□□ -2.03
VRK1-203ENST00000555067 KLK9Q9UKQ9 250 aa2.4□□□□□ -2.03
VRK1-203ENST00000555067 IER3IP1Q9Y5U9 82 aa2.4□□□□□ -2.03
VRK1-203ENST00000555067 ALPK2Q86TB3 2170 aa2.4□□□□□ -2.03
VRK1-203ENST00000555067 NINQ8N4C6 2090 aa2.4□□□□□ -2.03
VRK1-203ENST00000555067 CR1P17927 2039 aa2.39□□□□□ -2.03
VRK1-203ENST00000555067 KTN1Q86UP2 1357 aaKnown RBP2.39□□□□□ -2.03
VRK1-203ENST00000555067 ZFYVE16Q7Z3T8 1539 aa2.39□□□□□ -2.03
VRK1-203ENST00000555067 J3QRE1 110 aa2.39□□□□□ -2.03
VRK1-203ENST00000555067 IGHV3-33P01772 117 aa2.39□□□□□ -2.03
VRK1-203ENST00000555067 IGKCP01834 107 aa2.39□□□□□ -2.03
VRK1-203ENST00000555067 IL7P13232 177 aa2.39□□□□□ -2.03
VRK1-203ENST00000555067 C15orf53Q8NAA6 179 aa2.39□□□□□ -2.03
VRK1-203ENST00000555067 PLPP5Q8NEB5 264 aa2.39□□□□□ -2.03
VRK1-203ENST00000555067 MRPL57Q9BQC6 102 aaKnown RBP2.39□□□□□ -2.03
VRK1-203ENST00000555067 LIMD2Q9BT23 127 aa2.39□□□□□ -2.03
VRK1-203ENST00000555067 NDUFA12Q9UI09 145 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms