RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 TCTAP57738 103 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 RPL38P63173 70 aaKnown RBP2.25□□□□□ -2.05
PSEN1-211ENST00000554995 ELOBQ15370 118 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 C3orf33Q6P1S2 294 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 OR13D1Q8NGV5 346 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 NAT14Q8WUY8 206 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 CANT1Q8WVQ1 401 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 MBD3L1Q8WWY6 194 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 AQP3Q92482 292 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 RMND5BQ96G75 393 aaPredicted RBP2.25□□□□□ -2.05
PSEN1-211ENST00000554995 COX14Q96I36 57 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 MIXL1Q9H2W2 232 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 BIN3Q9NQY0 253 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 RNF11Q9Y3C5 154 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 PCNX1Q96RV3 2341 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 DOPEY2Q9Y3R5 2298 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 ITPR2Q14571 2701 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 MALRD1Q5VYJ5 2156 aa2.25□□□□□ -2.05
PSEN1-211ENST00000554995 LRBAP50851 2863 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 NUP210LQ5VU65 1888 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 PTPRQQ9UMZ3 2332 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 TAX1BP3O14907 124 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 CCL16O15467 120 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 IFNA14P01570 189 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 RNASE4P34096 147 aaKnown RBP2.24□□□□□ -2.05
PSEN1-211ENST00000554995 AKR1C3P42330 323 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 TMBIM6P55061 237 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 B2MP61769 119 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 C6orf52Q5T4I8 152 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 RPS27LQ71UM5 84 aaKnown RBP2.24□□□□□ -2.05
PSEN1-211ENST00000554995 C10orf126Q8N4M7 172 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 OR4D11Q8NGI4 311 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 LZICQ8WZA0 190 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 ZNF625Q96I27 306 aaPredicted RBP2.24□□□□□ -2.05
PSEN1-211ENST00000554995 TEX37Q96LM6 180 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 PBDC1Q9BVG4 233 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 ACER3Q9NUN7 267 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 TAS2R7Q9NYW3 318 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 ATPIF1Q9UII2 106 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 RP1P56715 2156 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 NCKAP5O14513 1909 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 NAV3Q8IVL0 2385 aa2.24□□□□□ -2.05
PSEN1-211ENST00000554995 EXPH5Q8NEV8 1989 aa2.23□□□□□ -2.05
PSEN1-211ENST00000554995 URB1O60287 2271 aaKnown RBP2.23□□□□□ -2.05
PSEN1-211ENST00000554995 MPDZO75970 2070 aa2.23□□□□□ -2.05
PSEN1-211ENST00000554995 C7orf71A4D174 169 aa2.23□□□□□ -2.05
PSEN1-211ENST00000554995 C10orf142B7Z368 130 aa2.23□□□□□ -2.05
PSEN1-211ENST00000554995 CRPP02741 224 aa2.23□□□□□ -2.05
PSEN1-211ENST00000554995 ZNF846Q147U1 533 aa2.23□□□□□ -2.05
PSEN1-211ENST00000554995 C8orf59Q8N0T1 100 aaPredicted RBP2.23□□□□□ -2.05
PSEN1-211ENST00000554995 STX19Q8N4C7 294 aa2.23□□□□□ -2.05
PSEN1-211ENST00000554995 LINC00471Q8N535 108 aa2.23□□□□□ -2.05
PSEN1-211ENST00000554995 TCEAL4Q96EI5 215 aa2.23□□□□□ -2.05
PSEN1-211ENST00000554995 AIF1LQ9BQI0 150 aa2.23□□□□□ -2.05
PSEN1-211ENST00000554995 TPRKBQ9Y3C4 175 aa2.23□□□□□ -2.05
PSEN1-211ENST00000554995 ASCC3Q8N3C0 2202 aaKnown RBP2.23□□□□□ -2.05
PSEN1-211ENST00000554995 SCN3AQ9NY46 2000 aa2.23□□□□□ -2.05
PSEN1-211ENST00000554995 PI4KAP42356 2102 aa2.23□□□□□ -2.05
PSEN1-211ENST00000554995 SPG11Q96JI7 2443 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 FLNCQ14315 2725 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 EML5Q05BV3 1969 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 LOC100130705A0A1B0GUX0 176 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 DUXBA0A1W2PPF3 345 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 GNG14A0A1W2PPG7 69 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 E7EQ34 232 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 M0R378 163 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 GNGT2O14610 69 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 TPST1O60507 370 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 APODP05090 189 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 SMIM11AP58511 58 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 SELENOWP63302 87 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 SCGB2B2Q4G0G5 96 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 SCIMPQ6UWF3 145 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 FP248Q71RG6 208 aaPredicted RBP2.22□□□□□ -2.05
PSEN1-211ENST00000554995 GRINAQ7Z429 371 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 COMMD6Q7Z4G1 85 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 OR10J5Q8NHC4 309 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 SKA2Q8WVK7 121 aaPredicted RBP2.22□□□□□ -2.05
PSEN1-211ENST00000554995 ISOC1Q96CN7 298 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 ZHX1-C8orf76Q96EF9 292 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 Q96M85 177 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 SLC50A1Q9BRV3 221 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 TPT1P8Q9HAU6 139 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 BCL2L10Q9HD36 194 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 SCN3BQ9NY72 215 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 LRRK2Q5S007 2527 aa2.22□□□□□ -2.05
PSEN1-211ENST00000554995 TNRC6BQ9UPQ9 1833 aaKnown RBP2.21□□□□□ -2.05
PSEN1-211ENST00000554995 ABCA2Q9BZC7 2435 aa2.21□□□□□ -2.06
PSEN1-211ENST00000554995 DSPPQ9NZW4 1301 aa2.21□□□□□ -2.06
PSEN1-211ENST00000554995 MGAQ8IWI9 3026 aa2.21□□□□□ -2.06
PSEN1-211ENST00000554995 UNC13CQ8NB66 2214 aa2.21□□□□□ -2.06
PSEN1-211ENST00000554995 EFCAB10A6NFE3 127 aa2.21□□□□□ -2.06
PSEN1-211ENST00000554995 PPP5D1E7EU14 171 aa2.21□□□□□ -2.06
PSEN1-211ENST00000554995 ZNF705BP0CI00 300 aaPredicted RBP2.21□□□□□ -2.06
PSEN1-211ENST00000554995 PIPP12273 146 aaPredicted RBP2.21□□□□□ -2.06
PSEN1-211ENST00000554995 COPZ1P61923 177 aa2.21□□□□□ -2.06
PSEN1-211ENST00000554995 SNRPGP62308 76 aaKnown RBP2.21□□□□□ -2.06
PSEN1-211ENST00000554995 CDK6Q00534 326 aa2.21□□□□□ -2.06
PSEN1-211ENST00000554995 ATMQ13315 3056 aa2.21□□□□□ -2.06
PSEN1-211ENST00000554995 SPANXN5Q5MJ07 72 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms