RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 SFTA3P0C7M3 94 aa11.84□□□□□ -0.51
SPTLC2-203ENST00000554901 HTN1P15515 57 aa11.84□□□□□ -0.51
SPTLC2-203ENST00000554901 TMEM241Q24JQ0 296 aa11.84□□□□□ -0.51
SPTLC2-203ENST00000554901 MUC21Q5SSG8 566 aa11.84□□□□□ -0.51
SPTLC2-203ENST00000554901 NAGKQ9UJ70 344 aa11.84□□□□□ -0.51
SPTLC2-203ENST00000554901 TP53TG3Q9ULZ0 132 aa11.84□□□□□ -0.51
SPTLC2-203ENST00000554901 PGPEP1LA6NFU8 196 aa11.83□□□□□ -0.52
SPTLC2-203ENST00000554901 LINC01559Q495D7 138 aa11.83□□□□□ -0.52
SPTLC2-203ENST00000554901 PRR27Q6MZM9 219 aa11.83□□□□□ -0.52
SPTLC2-203ENST00000554901 LINC01551Q86U37 167 aa11.83□□□□□ -0.52
SPTLC2-203ENST00000554901 DAZAP1Q96EP5 407 aaKnown RBP11.83□□□□□ -0.52
SPTLC2-203ENST00000554901 C11orf21Q9P2W6 132 aa11.83□□□□□ -0.52
SPTLC2-203ENST00000554901 NAT8Q9UHE5 227 aa11.83□□□□□ -0.52
SPTLC2-203ENST00000554901 C19orf71A6NCJ1 209 aa11.82□□□□□ -0.52
SPTLC2-203ENST00000554901 ORM1P02763 201 aa11.82□□□□□ -0.52
SPTLC2-203ENST00000554901 AZU1P20160 251 aa11.82□□□□□ -0.52
SPTLC2-203ENST00000554901 IGKV3D-20A0A0C4DH25 116 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 TEX48A0A1B0GUV7 120 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 TMEM218A2RU14 115 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 KRBOX1C9JBD0 128 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 K7EN84 100 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 CXCL1P09341 107 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 SNURFLB1AK76 121 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 B4DEV8 164 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 PRM2P04554 102 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 TYMSP04818 313 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 TCL1AP56279 114 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 ZNF415Q09FC8 603 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 DNLZQ5SXM8 178 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 FAM231DQ6ZW35 169 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 C11orf72Q8NBR9 251 aa11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 TIMM8BQ9Y5J9 83 aaPredicted RBP11.81□□□□□ -0.52
SPTLC2-203ENST00000554901 HUWE1Q7Z6Z7 4374 aaKnown RBP11.8□□□□□ -0.52
SPTLC2-203ENST00000554901 A0A0J9YWU9 116 aa11.8□□□□□ -0.52
SPTLC2-203ENST00000554901 PLAC8L1A1L4L8 177 aa11.8□□□□□ -0.52
SPTLC2-203ENST00000554901 P01737 135 aa11.8□□□□□ -0.52
SPTLC2-203ENST00000554901 PNRC1Q12796 327 aaPredicted RBP11.8□□□□□ -0.52
SPTLC2-203ENST00000554901 DAZ2Q13117 558 aaKnown RBP11.8□□□□□ -0.52
SPTLC2-203ENST00000554901 OR5I1Q13606 314 aa11.8□□□□□ -0.52
SPTLC2-203ENST00000554901 IGHV3-16A0A0C4DH30 117 aa11.79□□□□□ -0.52
SPTLC2-203ENST00000554901 LYRM9A8MSI8 78 aa11.79□□□□□ -0.52
SPTLC2-203ENST00000554901 M0R036 132 aa11.79□□□□□ -0.52
SPTLC2-203ENST00000554901 RPS20P60866 119 aaKnown RBP11.79□□□□□ -0.52
SPTLC2-203ENST00000554901 RPL23P62829 140 aaKnown RBP11.79□□□□□ -0.52
SPTLC2-203ENST00000554901 IL17DQ8TAD2 202 aa11.79□□□□□ -0.52
SPTLC2-203ENST00000554901 SPXQ9BT56 116 aa11.79□□□□□ -0.52
SPTLC2-203ENST00000554901 EDA2RQ9HAV5 297 aa11.79□□□□□ -0.52
SPTLC2-203ENST00000554901 TGP01266 2768 aa11.79□□□□□ -0.52
SPTLC2-203ENST00000554901 XKRY2A2RUG3 117 aa11.78□□□□□ -0.52
SPTLC2-203ENST00000554901 GNRH2O43555 120 aa11.78□□□□□ -0.52
SPTLC2-203ENST00000554901 ASIPP42127 132 aa11.78□□□□□ -0.52
SPTLC2-203ENST00000554901 NUDT10Q8NFP7 164 aa11.78□□□□□ -0.52
SPTLC2-203ENST00000554901 NUDT11Q96G61 164 aa11.78□□□□□ -0.52
SPTLC2-203ENST00000554901 SEC11CQ9BY50 192 aa11.78□□□□□ -0.52
SPTLC2-203ENST00000554901 GSN-AS1Q9NRJ2 163 aa11.78□□□□□ -0.52
SPTLC2-203ENST00000554901 DEFB4AO15263 64 aa11.77□□□□□ -0.52
SPTLC2-203ENST00000554901 SPART-AS1P0CW21 52 aa11.77□□□□□ -0.52
SPTLC2-203ENST00000554901 EMP1P54849 157 aa11.77□□□□□ -0.52
SPTLC2-203ENST00000554901 ISOC2Q96AB3 205 aa11.77□□□□□ -0.52
SPTLC2-203ENST00000554901 OSTCQ9NRP0 149 aa11.77□□□□□ -0.52
SPTLC2-203ENST00000554901 IL36BQ9NZH7 164 aa11.77□□□□□ -0.52
SPTLC2-203ENST00000554901 MDFICQ9P1T7 246 aa11.77□□□□□ -0.52
SPTLC2-203ENST00000554901 DKK2Q9UBU2 259 aa11.77□□□□□ -0.52
SPTLC2-203ENST00000554901 F8W036 122 aa11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 MED14OSP0DP75 135 aa11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 S100A4P26447 101 aaKnown RBP11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 ERVFC1-1P60608 527 aa11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 ADIRFQ15847 76 aa11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 LGALS9BQ3B8N2 356 aa11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 OR2D3Q8NGH3 330 aa11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 RPP21Q9H633 154 aaKnown RBP11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 CXorf65A6NEN9 183 aa11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 RNASE3P12724 160 aaKnown RBP11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 CT83Q5H943 113 aa11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 FAM222AQ5U5X8 452 aa11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 ZNF575Q86XF7 245 aa11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 C15orf54Q8N8G6 183 aa11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 C9orf85Q96MD7 179 aa11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 RNASE7Q9H1E1 156 aaKnown RBP11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 NOP10Q9NPE3 64 aaKnown RBP11.76□□□□□ -0.53
SPTLC2-203ENST00000554901 C11orf45Q8TAV5 145 aa11.75□□□□□ -0.53
SPTLC2-203ENST00000554901 PTH2Q96A98 100 aa11.75□□□□□ -0.53
SPTLC2-203ENST00000554901 SFRP2Q96HF1 295 aa11.75□□□□□ -0.53
SPTLC2-203ENST00000554901 NDUFAF3Q9BU61 184 aa11.75□□□□□ -0.53
SPTLC2-203ENST00000554901 TMSB15BA0A087X1C1 80 aa11.74□□□□□ -0.53
SPTLC2-203ENST00000554901 M0R2P5 195 aa11.74□□□□□ -0.53
SPTLC2-203ENST00000554901 GATCO43716 136 aaKnown RBP11.74□□□□□ -0.53
SPTLC2-203ENST00000554901 SPINK4O60575 86 aa11.74□□□□□ -0.53
SPTLC2-203ENST00000554901 ADCYAP1P18509 176 aa11.74□□□□□ -0.53
SPTLC2-203ENST00000554901 RPL19P84098 196 aaKnown RBP11.74□□□□□ -0.53
SPTLC2-203ENST00000554901 PIK3CD-AS1Q5SR53 167 aa11.74□□□□□ -0.53
SPTLC2-203ENST00000554901 C10orf91Q5T1B1 145 aa11.74□□□□□ -0.53
SPTLC2-203ENST00000554901 LINC00612Q8N6U2 182 aa11.74□□□□□ -0.53
SPTLC2-203ENST00000554901 GRIFINA4D1Z8 144 aa11.73□□□□□ -0.53
SPTLC2-203ENST00000554901 A8MWL6 223 aa11.73□□□□□ -0.53
SPTLC2-203ENST00000554901 C18orf15Q96N68 181 aa11.73□□□□□ -0.53
SPTLC2-203ENST00000554901 SSBP4Q9BWG4 385 aaPredicted RBP11.73□□□□□ -0.53
SPTLC2-203ENST00000554901 SCRT2Q9NQ03 307 aa11.73□□□□□ -0.53
SPTLC2-203ENST00000554901 CELA1Q9UNI1 258 aa11.73□□□□□ -0.53
SPTLC2-203ENST00000554901 CARHSP1Q9Y2V2 147 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms