RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 UBE2NLQ5JXB2 153 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 FAM78BQ5VT40 261 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 RPL13AP3Q6NVV1 102 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 GLIPR1L1Q6UWM5 242 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 FAM19A1Q7Z5A9 133 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 TMEM144Q7Z5S9 345 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 TMED4Q7Z7H5 227 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 AMN1Q8IY45 258 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 C10orf67Q8IYJ2 551 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 OR8J3Q8NGG0 315 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 OR51H1Q8NH63 302 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 LRRC20Q8TCA0 184 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 BLNKQ8WV28 456 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 FXYD5Q96DB9 178 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 DPH3Q96FX2 82 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 YPEL4Q96NS1 127 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 GINS4Q9BRT9 223 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 SIKE1Q9BRV8 207 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 TMEM70Q9BUB7 260 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 PBDC1Q9BVG4 233 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 KRTAP4-1Q9BYQ7 146 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 PRRG3Q9BZD7 231 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 NXF2Q9GZY0 626 aaKnown RBP0.73□□□□□ -2.29
PRPF39-208ENST00000554785 FAM107BQ9H098 131 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 METTL9Q9H1A3 318 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 DIABLOQ9NR28 239 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 SLC2A9Q9NRM0 540 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 BABAM2Q9NXR7 383 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 SMPXQ9UHP9 88 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 KLK9Q9UKQ9 250 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 TRAPPC1Q9Y5R8 145 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 ZNF706Q9Y5V0 76 aaPredicted RBP0.73□□□□□ -2.29
PRPF39-208ENST00000554785 R4GN34 69 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 TRGV2A0A075B6R0 118 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 IGKV1OR2-108A0A075B7D4 117 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 TRBV7-1A0A0A6YYK4 115 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 DAPL1A0PJW8 107 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 ZNF705FA8MVS1 300 aaPredicted RBP0.73□□□□□ -2.29
PRPF39-208ENST00000554785 H3BQ85 93 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 K7ERS5 55 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 SULT1C2O00338 296 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 NDUFA4O00483 81 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 GYG2O15488 501 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 YPEL1O60688 119 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 NAPSAO96009 420 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 DHFRP00374 187 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 SFTA3P0C7M3 94 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 M6PRP20645 277 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 CCL1P22362 96 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 NFYAP23511 347 aaPredicted RBP0.73□□□□□ -2.29
PRPF39-208ENST00000554785 PSMB6P28072 239 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 MAP2K4P45985 399 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 FXYD4P59646 89 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 SNRPD3P62318 126 aaKnown RBP0.73□□□□□ -2.29
PRPF39-208ENST00000554785 RPL30P62888 115 aaKnown RBP0.73□□□□□ -2.29
PRPF39-208ENST00000554785 PPP3R1P63098 170 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 WT1-ASQ06250 92 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 WHAMMP3Q1A5X7 153 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 TMEM241Q24JQ0 296 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 PDZD11Q5EBL8 140 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 ZNF773Q6PK81 442 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 ZNF705AQ6ZN79 300 aaPredicted RBP0.73□□□□□ -2.29
PRPF39-208ENST00000554785 C1orf158Q8N1D5 194 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 TTC9CQ8N5M4 171 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 MNS1Q8NEH6 495 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 OR5D14Q8NGL3 314 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 TMEM167AQ8TBQ9 72 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 DCANP1Q8TF63 244 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 ASB17Q8WXJ9 295 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 PYURFQ96I23 114 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 YPEL2Q96QA6 119 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 RETNLBQ9BQ08 111 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 COMMD5Q9GZQ3 224 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 PLEKHJ1Q9NW61 149 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 RBMX2Q9Y388 322 aaKnown RBP0.73□□□□□ -2.29
PRPF39-208ENST00000554785 ICOSQ9Y6W8 199 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 TRGV1A0A0A0MS02 117 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 MUC21A0A0G2JKD1 596 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 A0A1B0GXF2 115 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 IGLC7A0M8Q6 106 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 TMEM189A5PLL7 270 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 METTL15A6NJ78 407 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 H3BMM0 161 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 K7EIM0 57 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 ISLRO14498 428 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 PDCD6O75340 191 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 MT-CO2P00403 227 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 CTSGP08311 255 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 C8orf88P0DMB2 117 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 SCGB1C2P0DMR2 95 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 EVI2AP22794 236 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 KCNJ3P48549 501 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 SMIM11AP58511 58 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 HLA-DRB3P79483 266 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 MRPS15P82914 257 aaKnown RBP0.72□□□□□ -2.29
PRPF39-208ENST00000554785 CDK10Q15131 360 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 HMGN3Q15651 99 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 MPV17LQ2QL34 196 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 PYDC2Q56P42 97 aa0.72□□□□□ -2.29
PRPF39-208ENST00000554785 OGFRL1Q5TC84 451 aaPredicted RBP0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms