RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 OR2K2Q8NGT1 345 aa9.1□□□□□ -0.95
RIPK3-204ENST00000554756 RHPN1-AS1Q9BWJ2 59 aa9.1□□□□□ -0.95
RIPK3-204ENST00000554756 U3KQE9 123 aa9.1□□□□□ -0.95
RIPK3-204ENST00000554756 A0A1W2PS18 150 aa9.09□□□□□ -0.95
RIPK3-204ENST00000554756 AMTP48728 403 aa9.09□□□□□ -0.95
RIPK3-204ENST00000554756 CAMPP49913 170 aa9.09□□□□□ -0.95
RIPK3-204ENST00000554756 KIAA1644Q3SXP7 199 aa9.09□□□□□ -0.95
RIPK3-204ENST00000554756 Q6ZWC4 215 aa9.09□□□□□ -0.95
RIPK3-204ENST00000554756 TMEM61Q8N0U2 210 aa9.09□□□□□ -0.95
RIPK3-204ENST00000554756 PGLYRP4Q96LB8 373 aa9.09□□□□□ -0.95
RIPK3-204ENST00000554756 SMAD5-AS1Q9Y6J3 95 aa9.09□□□□□ -0.95
RIPK3-204ENST00000554756 NOTCH3Q9UM47 2321 aa9.09□□□□□ -0.95
RIPK3-204ENST00000554756 ZNF785A8K8V0 405 aa9.09□□□□□ -0.95
RIPK3-204ENST00000554756 CHCHD1Q96BP2 118 aaKnown RBP9.09□□□□□ -0.95
RIPK3-204ENST00000554756 MEGF8Q7Z7M0 2845 aa9.08□□□□□ -0.96
RIPK3-204ENST00000554756 KIR2DL5BA0A0G2JN68 375 aa9.08□□□□□ -0.96
RIPK3-204ENST00000554756 KIR2DL5BA0A0G2JPC4 375 aa9.08□□□□□ -0.96
RIPK3-204ENST00000554756 F2Z2F3 143 aa9.08□□□□□ -0.96
RIPK3-204ENST00000554756 TEX43Q6ZNM6 134 aa9.08□□□□□ -0.96
RIPK3-204ENST00000554756 KIR2DL5AQ8N109 375 aa9.08□□□□□ -0.96
RIPK3-204ENST00000554756 ZNF664Q8N3J9 261 aa9.08□□□□□ -0.96
RIPK3-204ENST00000554756 IGKV3-7A0A075B6H7 116 aa9.07□□□□□ -0.96
RIPK3-204ENST00000554756 LOC102724200A0A096LPH7 203 aaPredicted RBP9.07□□□□□ -0.96
RIPK3-204ENST00000554756 TMEM189A5PLL7 270 aa9.07□□□□□ -0.96
RIPK3-204ENST00000554756 HSBP1O75506 76 aa9.07□□□□□ -0.96
RIPK3-204ENST00000554756 PMCHP20382 165 aa9.07□□□□□ -0.96
RIPK3-204ENST00000554756 LBHQ53QV2 105 aaPredicted RBP9.07□□□□□ -0.96
RIPK3-204ENST00000554756 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.07□□□□□ -0.96
RIPK3-204ENST00000554756 RCHY1Q96PM5 261 aa9.07□□□□□ -0.96
RIPK3-204ENST00000554756 NRN1Q9NPD7 142 aa9.07□□□□□ -0.96
RIPK3-204ENST00000554756 PPP1R14DQ9NXH3 145 aa9.07□□□□□ -0.96
RIPK3-204ENST00000554756 CRIP1P50238 77 aa9.07□□□□□ -0.96
RIPK3-204ENST00000554756 ZNF493Q6ZR52 646 aa9.07□□□□□ -0.96
RIPK3-204ENST00000554756 TRAV25A0A0B4J276 109 aa9.06□□□□□ -0.96
RIPK3-204ENST00000554756 ZNF705FA8MVS1 300 aaPredicted RBP9.06□□□□□ -0.96
RIPK3-204ENST00000554756 SH2D1AO60880 128 aa9.06□□□□□ -0.96
RIPK3-204ENST00000554756 ZNF705DP0CH99 300 aaPredicted RBP9.06□□□□□ -0.96
RIPK3-204ENST00000554756 ZNF705BP0CI00 300 aaPredicted RBP9.06□□□□□ -0.96
RIPK3-204ENST00000554756 TFPI2P48307 235 aa9.06□□□□□ -0.96
RIPK3-204ENST00000554756 GTSCR1Q86UQ5 136 aa9.06□□□□□ -0.96
RIPK3-204ENST00000554756 Q8N1Y9 231 aa9.06□□□□□ -0.96
RIPK3-204ENST00000554756 C20orf144Q9BQM9 153 aa9.06□□□□□ -0.96
RIPK3-204ENST00000554756 NDUFAF3Q9BU61 184 aa9.06□□□□□ -0.96
RIPK3-204ENST00000554756 IGKV2-40A0A087WW87 121 aaPredicted RBP9.05□□□□□ -0.96
RIPK3-204ENST00000554756 IGKV2D-40P01614 121 aaPredicted RBP9.05□□□□□ -0.96
RIPK3-204ENST00000554756 CD7P09564 240 aa9.05□□□□□ -0.96
RIPK3-204ENST00000554756 CTRLP40313 264 aa9.05□□□□□ -0.96
RIPK3-204ENST00000554756 RPL11P62913 178 aaKnown RBP9.05□□□□□ -0.96
RIPK3-204ENST00000554756 MRPL52Q86TS9 123 aaKnown RBP9.05□□□□□ -0.96
RIPK3-204ENST00000554756 C8orf49Q96NF6 230 aa9.05□□□□□ -0.96
RIPK3-204ENST00000554756 ASCL2Q99929 193 aa9.05□□□□□ -0.96
RIPK3-204ENST00000554756 SSBP4Q9BWG4 385 aaPredicted RBP9.05□□□□□ -0.96
RIPK3-204ENST00000554756 LENEPQ9Y5L5 61 aa9.05□□□□□ -0.96
RIPK3-204ENST00000554756 CMYA5Q8N3K9 4069 aa9.04□□□□□ -0.96
RIPK3-204ENST00000554756 OR5AL1P0C617 328 aa9.04□□□□□ -0.96
RIPK3-204ENST00000554756 NIT1Q86X76 327 aa9.04□□□□□ -0.96
RIPK3-204ENST00000554756 WFDC3Q8IUB2 231 aa9.04□□□□□ -0.96
RIPK3-204ENST00000554756 PRO1933Q9H354 126 aa9.04□□□□□ -0.96
RIPK3-204ENST00000554756 FABP5P3A8MUU1 101 aa9.04□□□□□ -0.96
RIPK3-204ENST00000554756 HIST1H1AQ02539 215 aaPredicted RBP9.04□□□□□ -0.96
RIPK3-204ENST00000554756 SAMD13Q5VXD3 122 aa9.04□□□□□ -0.96
RIPK3-204ENST00000554756 GLMPQ8WWB7 406 aa9.04□□□□□ -0.96
RIPK3-204ENST00000554756 C14orf144Q96I85 54 aa9.04□□□□□ -0.96
RIPK3-204ENST00000554756 SPAG8Q99932 426 aaPredicted RBP9.04□□□□□ -0.96
RIPK3-204ENST00000554756 M0R2Z0 102 aa9.03□□□□□ -0.96
RIPK3-204ENST00000554756 ARMS2P0C7Q2 107 aa9.03□□□□□ -0.96
RIPK3-204ENST00000554756 KRTDAPP60985 99 aa9.03□□□□□ -0.96
RIPK3-204ENST00000554756 PMCHL1Q16048 86 aa9.03□□□□□ -0.96
RIPK3-204ENST00000554756 LINC01559Q495D7 138 aa9.03□□□□□ -0.96
RIPK3-204ENST00000554756 RNASEKQ6P5S7 137 aaKnown RBP9.03□□□□□ -0.96
RIPK3-204ENST00000554756 C9orf47Q6ZRZ4 202 aa9.03□□□□□ -0.96
RIPK3-204ENST00000554756 VGLL1Q99990 258 aa9.03□□□□□ -0.96
RIPK3-204ENST00000554756 VAMP8Q9BV40 100 aa9.03□□□□□ -0.96
RIPK3-204ENST00000554756 CNFNQ9BYD5 112 aa9.03□□□□□ -0.96
RIPK3-204ENST00000554756 WFDC10AQ9H1F0 79 aa9.03□□□□□ -0.96
RIPK3-204ENST00000554756 IGLC6P0CF74 106 aa9.02□□□□□ -0.97
RIPK3-204ENST00000554756 TMEM78Q5T7P6 136 aa9.02□□□□□ -0.97
RIPK3-204ENST00000554756 NOTCH1P46531 2555 aa9.02□□□□□ -0.97
RIPK3-204ENST00000554756 OR4C46A6NHA9 309 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 IGHV4-30-4P0DP06 118 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 ZNF138P52744 262 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 DEFB125Q8N687 156 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 FER1L6-AS1Q8NA97 138 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 MS4A6AQ9H2W1 248 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 TRAV8-2A0A0B4J237 113 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 C20orf202A1L168 122 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 OR11H12B2RN74 326 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 LINC00614P0C842 121 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 C3orf79P0CE67 100 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 NTF3P20783 257 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 LYZL1Q6UWQ5 148 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 Q8N976 141 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 U3KQK5 164 aa9.01□□□□□ -0.97
RIPK3-204ENST00000554756 TRBV7-9A0A0J9YWB2 115 aa9□□□□□ -0.97
RIPK3-204ENST00000554756 BTF3P20290 206 aaKnown RBP9□□□□□ -0.97
RIPK3-204ENST00000554756 HLA-DMBP28068 263 aa9□□□□□ -0.97
RIPK3-204ENST00000554756 Q8TAT8 98 aa9□□□□□ -0.97
RIPK3-204ENST00000554756 C19orf73Q9NVV2 129 aa9□□□□□ -0.97
RIPK3-204ENST00000554756 CRXO43186 299 aaPredicted RBP8.99□□□□□ -0.97
RIPK3-204ENST00000554756 FAM104BQ5XKR9 115 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms