RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 TRAV41A0A0B4J266 112 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 A6NDN8 102 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 CST7O76096 145 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 IGLC2P0DOY2 106 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 IGLC3P0DOY3 106 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 FAUP35544 74 aaKnown RBP2.06□□□□□ -2.08
PRPF39-206ENST00000554429 PROK1P58294 105 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 DAD1P61803 113 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 CCL20P78556 96 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 HOXA4Q00056 320 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF90Q03938 601 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 FHL1Q13642 323 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF260Q3ZCT1 412 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 SPATA45Q537H7 98 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 ATOH7Q8N100 152 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 C11orf72Q8NBR9 251 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 OR5C1Q8NGR4 320 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 LSM10Q969L4 123 aaKnown RBP2.06□□□□□ -2.08
PRPF39-206ENST00000554429 KCNS1Q96KK3 526 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 TMEM191AQ9H0A3 160 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 RPRMQ9NS64 109 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 DOCK11Q5JSL3 2073 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 TRAV13-1A0A0B4J241 112 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 A0A0G2JRQ6 117 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 LOC107986453A0A1B0GWG9 222 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 IRGMA1A4Y4 181 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 UMAD1C9J7I0 102 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 LYNX1G3V0Z9 82 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 M0R381 172 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 ISLRO14498 428 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 IGHG1P01857 330 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 LYNX1P0DP58 116 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 CA6P23280 308 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 KRTAP10-3P60369 221 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 SEC61BP60468 96 aaKnown RBP2.05□□□□□ -2.08
PRPF39-206ENST00000554429 PCBD1P61457 104 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 COL10A1Q03692 680 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 LINC01590Q5TEZ4 76 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 Q6Q795 121 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 Q6ZPA2 131 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 LINC00173Q6ZV60 143 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 LINC00305Q7Z4B0 112 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 C6orf201Q7Z4U5 140 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 OTOSQ8NHW6 89 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 ARHGAP5-AS1Q96IT6 56 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 RNF126Q9BV68 326 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 CALYQ9NYX4 217 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 KAAG1Q9UBP8 84 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 TP73-AS1Q9UF72 201 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF706Q9Y5V0 76 aaPredicted RBP2.05□□□□□ -2.08
PRPF39-206ENST00000554429 TET2Q6N021 2002 aaPredicted RBP2.05□□□□□ -2.08
PRPF39-206ENST00000554429 DYNC2H1Q8NCM8 4307 aaKnown RBP2.05□□□□□ -2.08
PRPF39-206ENST00000554429 TRAV1-1A0A0B4J248 108 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 ZFP92A6NM28 416 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 IQCF6A8MYZ5 107 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 K7ERJ3 54 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 LGALS9O00182 355 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 HOXB6P17509 224 aaKnown RBP2.05□□□□□ -2.08
PRPF39-206ENST00000554429 FOXI1Q12951 378 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 ADIRFQ15847 76 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 SLC25A26Q70HW3 274 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 PRR15Q8IV56 129 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 Q8N2B8 174 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 LINC00337Q8N6G1 96 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 OR10J6PQ8NGY7 276 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 C15orf40Q8WUR7 153 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 PGLYRP4Q96LB8 373 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 DSCR8Q96T75 97 aa2.05□□□□□ -2.08
PRPF39-206ENST00000554429 TRAV1-2A0A0B4J238 106 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 LINC00473A8K010 186 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 A8MUN3 132 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 H0Y9J4 135 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SNCGO76070 127 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 FCGR2CP31995 323 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SLC25A1P53007 311 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 TAS2R45P59539 299 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 TAS2R19P59542 299 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 TMEM258P61165 79 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 HMGN3Q15651 99 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 C6orf99Q4VX62 202 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SPINK9Q5DT21 86 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 RUSC1-AS1Q66K80 236 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 CRIP3Q6Q6R5 217 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 Q6ZSV7 163 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 FAM57BQ71RH2 274 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 LYZL2Q7Z4W2 148 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 KLF14Q8TD94 323 aaPredicted RBP2.04□□□□□ -2.08
PRPF39-206ENST00000554429 C17orf77Q96MU5 243 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 TM2D3Q9BRN9 247 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 CACFD1Q9UGQ2 172 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SPCS1Q9Y6A9 102 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 WNK2Q9Y3S1 2297 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 NOTCH3Q9UM47 2321 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 MUC21A0A140T8X8 626 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 RBAKDNA6NC62 111 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 FAM24AA6NFZ4 105 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 C15orf62A8K5M9 175 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SNRPGP15A8MWD9 76 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 K7EQD1 137 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SPINK4O60575 86 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms