RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 TMED6Q8WW62 240 aa11.79□□□□□ -0.52
SYNE2-211ENST00000553801 ATP5SQ99766 215 aa11.79□□□□□ -0.52
SYNE2-211ENST00000553801 SEC22CQ9BRL7 303 aa11.79□□□□□ -0.52
SYNE2-211ENST00000553801 PRADC1Q9BSG0 188 aa11.79□□□□□ -0.52
SYNE2-211ENST00000553801 TRAV6A0A075B6T7 132 aa11.78□□□□□ -0.52
SYNE2-211ENST00000553801 FBLL1A6NHQ2 334 aaKnown RBP11.78□□□□□ -0.52
SYNE2-211ENST00000553801 DIRC3C9JPN6 131 aa11.78□□□□□ -0.52
SYNE2-211ENST00000553801 GNRH2O43555 120 aa11.78□□□□□ -0.52
SYNE2-211ENST00000553801 CIDEAO60543 219 aa11.78□□□□□ -0.52
SYNE2-211ENST00000553801 LELP1Q5T871 98 aa11.78□□□□□ -0.52
SYNE2-211ENST00000553801 TRAV21A0A0B4J279 112 aa11.77□□□□□ -0.53
SYNE2-211ENST00000553801 LYRM1O43325 122 aa11.77□□□□□ -0.53
SYNE2-211ENST00000553801 NHLH2Q02577 135 aa11.77□□□□□ -0.53
SYNE2-211ENST00000553801 OR5C1Q8NGR4 320 aa11.77□□□□□ -0.53
SYNE2-211ENST00000553801 SDF2L1Q9HCN8 221 aa11.77□□□□□ -0.53
SYNE2-211ENST00000553801 C17orf112F2Z3M2 114 aa11.76□□□□□ -0.53
SYNE2-211ENST00000553801 PLA2G10O15496 165 aa11.76□□□□□ -0.53
SYNE2-211ENST00000553801 UBE2L3P68036 154 aaKnown RBP11.76□□□□□ -0.53
SYNE2-211ENST00000553801 RHOHQ15669 191 aa11.76□□□□□ -0.53
SYNE2-211ENST00000553801 SLC25A29Q8N8R3 303 aa11.76□□□□□ -0.53
SYNE2-211ENST00000553801 KCNS1Q96KK3 526 aa11.76□□□□□ -0.53
SYNE2-211ENST00000553801 SH3BGRL3Q9H299 93 aa11.76□□□□□ -0.53
SYNE2-211ENST00000553801 NUDT15Q9NV35 164 aa11.76□□□□□ -0.53
SYNE2-211ENST00000553801 TRBV6-4A0A1B0GX49 114 aa11.75□□□□□ -0.53
SYNE2-211ENST00000553801 TYMSP04818 313 aa11.75□□□□□ -0.53
SYNE2-211ENST00000553801 CMTM2Q8TAZ6 248 aa11.75□□□□□ -0.53
SYNE2-211ENST00000553801 HYLS1Q96M11 299 aa11.75□□□□□ -0.53
SYNE2-211ENST00000553801 GTSF1LQ9H1H1 148 aa11.75□□□□□ -0.53
SYNE2-211ENST00000553801 TRAV8-3A0A0A6YYJ7 113 aa11.74□□□□□ -0.53
SYNE2-211ENST00000553801 TAS2R45P59539 299 aa11.74□□□□□ -0.53
SYNE2-211ENST00000553801 FAM74A1Q5RGS3 127 aa11.74□□□□□ -0.53
SYNE2-211ENST00000553801 WDR61Q9GZS3 305 aaKnown RBP11.74□□□□□ -0.53
SYNE2-211ENST00000553801 H2AFB2P0C5Z0 115 aa11.73□□□□□ -0.53
SYNE2-211ENST00000553801 ZNF876PQ49A33 203 aa11.73□□□□□ -0.53
SYNE2-211ENST00000553801 KHDC3LQ587J8 217 aa11.73□□□□□ -0.53
SYNE2-211ENST00000553801 ATP6V0E2Q8NHE4 81 aa11.73□□□□□ -0.53
SYNE2-211ENST00000553801 ASB13Q8WXK3 278 aa11.73□□□□□ -0.53
SYNE2-211ENST00000553801 RBM38Q9H0Z9 239 aaKnown RBP11.73□□□□□ -0.53
SYNE2-211ENST00000553801 OTORQ9NRC9 128 aa11.73□□□□□ -0.53
SYNE2-211ENST00000553801 PGPA6NDG6 321 aa11.72□□□□□ -0.53
SYNE2-211ENST00000553801 RS1O15537 224 aa11.72□□□□□ -0.53
SYNE2-211ENST00000553801 WFDC2Q14508 124 aa11.72□□□□□ -0.53
SYNE2-211ENST00000553801 TOR2AQ5JU69 321 aa11.72□□□□□ -0.53
SYNE2-211ENST00000553801 CFAP126Q5VTH2 177 aa11.72□□□□□ -0.53
SYNE2-211ENST00000553801 ARL6IP6Q8N6S5 226 aa11.72□□□□□ -0.53
SYNE2-211ENST00000553801 NMES1Q9C002 83 aa11.72□□□□□ -0.53
SYNE2-211ENST00000553801 TREM1Q9NP99 234 aa11.72□□□□□ -0.53
SYNE2-211ENST00000553801 RPH3ALQ9UNE2 315 aa11.72□□□□□ -0.53
SYNE2-211ENST00000553801 OXTP01178 125 aa11.71□□□□□ -0.53
SYNE2-211ENST00000553801 ASAH1Q13510 395 aa11.71□□□□□ -0.53
SYNE2-211ENST00000553801 COX11Q9Y6N1 276 aa11.71□□□□□ -0.53
SYNE2-211ENST00000553801 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-211ENST00000553801 F6UZH7 168 aa11.7□□□□□ -0.54
SYNE2-211ENST00000553801 LECT2O14960 151 aa11.7□□□□□ -0.54
SYNE2-211ENST00000553801 MGST1P10620 155 aaKnown RBP11.7□□□□□ -0.54
SYNE2-211ENST00000553801 FFAR4Q5NUL3 377 aa11.7□□□□□ -0.54
SYNE2-211ENST00000553801 GOLT1AQ6ZVE7 132 aa11.7□□□□□ -0.54
SYNE2-211ENST00000553801 IGHV3-73A0A0B4J1V6 119 aa11.69□□□□□ -0.54
SYNE2-211ENST00000553801 SCXQ7RTU7 201 aa11.69□□□□□ -0.54
SYNE2-211ENST00000553801 MBD2Q9UBB5 411 aa11.69□□□□□ -0.54
SYNE2-211ENST00000553801 RBFOX3A6NFN3 312 aa11.68□□□□□ -0.54
SYNE2-211ENST00000553801 GGTLC3B5MD39 225 aa11.68□□□□□ -0.54
SYNE2-211ENST00000553801 Q8N976 141 aa11.68□□□□□ -0.54
SYNE2-211ENST00000553801 RMI2Q96E14 147 aa11.68□□□□□ -0.54
SYNE2-211ENST00000553801 TVP23CQ96ET8 276 aa11.68□□□□□ -0.54
SYNE2-211ENST00000553801 NDFIP1Q9BT67 221 aa11.68□□□□□ -0.54
SYNE2-211ENST00000553801 DPPA3Q6W0C5 159 aa11.67□□□□□ -0.54
SYNE2-211ENST00000553801 BAALCQ8WXS3 180 aa11.67□□□□□ -0.54
SYNE2-211ENST00000553801 PTH2Q96A98 100 aa11.67□□□□□ -0.54
SYNE2-211ENST00000553801 CHAC1Q9BUX1 264 aa11.67□□□□□ -0.54
SYNE2-211ENST00000553801 OR5AC2Q9NZP5 309 aa11.67□□□□□ -0.54
SYNE2-211ENST00000553801 PLA2G2DQ9UNK4 145 aa11.67□□□□□ -0.54
SYNE2-211ENST00000553801 TRAV8-1A0A0A6YYK1 113 aa11.66□□□□□ -0.54
SYNE2-211ENST00000553801 FAM240BA0A1B0GVZ2 78 aa11.66□□□□□ -0.54
SYNE2-211ENST00000553801 TAAR5O14804 337 aa11.66□□□□□ -0.54
SYNE2-211ENST00000553801 DAZ4Q86SG3 579 aaKnown RBP11.66□□□□□ -0.54
SYNE2-211ENST00000553801 SCGB1C1Q8TD33 95 aa11.66□□□□□ -0.54
SYNE2-211ENST00000553801 DAZ3Q9NR90 486 aaKnown RBP11.66□□□□□ -0.54
SYNE2-211ENST00000553801 A0A087WWC5 75 aa11.65□□□□□ -0.54
SYNE2-211ENST00000553801 SEC11BP0C7V7 166 aa11.65□□□□□ -0.54
SYNE2-211ENST00000553801 CYCSP99999 105 aaKnown RBP11.65□□□□□ -0.54
SYNE2-211ENST00000553801 ACOT6Q3I5F7 207 aaPredicted RBP11.65□□□□□ -0.54
SYNE2-211ENST00000553801 LRRC37A5PQ49AS3 106 aa11.65□□□□□ -0.54
SYNE2-211ENST00000553801 LINC01620Q4KN68 170 aa11.65□□□□□ -0.54
SYNE2-211ENST00000553801 PQLC2Q6ZP29 291 aa11.65□□□□□ -0.54
SYNE2-211ENST00000553801 Q8N3U1 123 aa11.65□□□□□ -0.54
SYNE2-211ENST00000553801 C9orf85Q96MD7 179 aa11.65□□□□□ -0.54
SYNE2-211ENST00000553801 HMCN2Q8NDA2 5059 aa11.65□□□□□ -0.54
SYNE2-211ENST00000553801 LRP1Q07954 4544 aaKnown RBP11.65□□□□□ -0.54
SYNE2-211ENST00000553801 SERTM2A0A1B0GWG4 89 aa11.64□□□□□ -0.55
SYNE2-211ENST00000553801 PGPEP1LA6NFU8 196 aa11.64□□□□□ -0.55
SYNE2-211ENST00000553801 SIX6O95475 246 aa11.64□□□□□ -0.55
SYNE2-211ENST00000553801 ZNF506Q5JVG8 444 aa11.64□□□□□ -0.55
SYNE2-211ENST00000553801 A0A1W2PPV4 95 aa11.63□□□□□ -0.55
SYNE2-211ENST00000553801 RNF222A6NCQ9 220 aa11.63□□□□□ -0.55
SYNE2-211ENST00000553801 GAGE12JA6NER3 117 aa11.63□□□□□ -0.55
SYNE2-211ENST00000553801 H0YIZ8 118 aa11.63□□□□□ -0.55
SYNE2-211ENST00000553801 KRTAP10-4P60372 401 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-211ENST00000553801 GAGE1Q13065 139 aa11.63□□□□□ -0.55
SYNE2-211ENST00000553801 GAGE4Q13068 117 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms