RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 PRR27Q6MZM9 219 aa13.94□□□□□ -0.18
PSEN1-207ENST00000553599 LINC01551Q86U37 167 aa13.94□□□□□ -0.18
PSEN1-207ENST00000553599 RNASE8Q8TDE3 154 aaKnown RBP13.94□□□□□ -0.18
PSEN1-207ENST00000553599 NAGKQ9UJ70 344 aa13.94□□□□□ -0.18
PSEN1-207ENST00000553599 TMEM218A2RU14 115 aa13.93□□□□□ -0.18
PSEN1-207ENST00000553599 ORM1P02763 201 aa13.93□□□□□ -0.18
PSEN1-207ENST00000553599 C11orf21Q9P2W6 132 aa13.93□□□□□ -0.18
PSEN1-207ENST00000553599 TP53TG3Q9ULZ0 132 aa13.93□□□□□ -0.18
PSEN1-207ENST00000553599 DNAH9Q9NYC9 4486 aa13.93□□□□□ -0.18
PSEN1-207ENST00000553599 C19orf71A6NCJ1 209 aa13.92□□□□□ -0.18
PSEN1-207ENST00000553599 K7EN84 100 aa13.92□□□□□ -0.18
PSEN1-207ENST00000553599 AZU1P20160 251 aa13.92□□□□□ -0.18
PSEN1-207ENST00000553599 FAM231DQ6ZW35 169 aa13.92□□□□□ -0.18
PSEN1-207ENST00000553599 COL7A1Q02388 2944 aa13.91□□□□□ -0.18
PSEN1-207ENST00000553599 B4DEV8 164 aa13.91□□□□□ -0.18
PSEN1-207ENST00000553599 KRBOX1C9JBD0 128 aa13.91□□□□□ -0.18
PSEN1-207ENST00000553599 P01737 135 aa13.91□□□□□ -0.18
PSEN1-207ENST00000553599 CXCL1P09341 107 aa13.91□□□□□ -0.18
PSEN1-207ENST00000553599 NDUFA5Q16718 116 aa13.91□□□□□ -0.18
PSEN1-207ENST00000553599 TENM3Q9P273 2699 aa13.91□□□□□ -0.18
PSEN1-207ENST00000553599 IGKV3D-20A0A0C4DH25 116 aa13.9□□□□□ -0.18
PSEN1-207ENST00000553599 TEX48A0A1B0GUV7 120 aa13.9□□□□□ -0.18
PSEN1-207ENST00000553599 TYMSP04818 313 aa13.9□□□□□ -0.18
PSEN1-207ENST00000553599 RPL23P62829 140 aaKnown RBP13.9□□□□□ -0.18
PSEN1-207ENST00000553599 ZNF415Q09FC8 603 aa13.9□□□□□ -0.18
PSEN1-207ENST00000553599 PNRC1Q12796 327 aaPredicted RBP13.9□□□□□ -0.18
PSEN1-207ENST00000553599 OR5I1Q13606 314 aa13.9□□□□□ -0.18
PSEN1-207ENST00000553599 DNLZQ5SXM8 178 aa13.9□□□□□ -0.18
PSEN1-207ENST00000553599 SNURFLB1AK76 121 aa13.89□□□□□ -0.19
PSEN1-207ENST00000553599 PRM2P04554 102 aa13.89□□□□□ -0.19
PSEN1-207ENST00000553599 TCL1AP56279 114 aa13.89□□□□□ -0.19
PSEN1-207ENST00000553599 RPS20P60866 119 aaKnown RBP13.89□□□□□ -0.19
PSEN1-207ENST00000553599 C11orf72Q8NBR9 251 aa13.89□□□□□ -0.19
PSEN1-207ENST00000553599 SEC11CQ9BY50 192 aa13.89□□□□□ -0.19
PSEN1-207ENST00000553599 TIMM8BQ9Y5J9 83 aaPredicted RBP13.89□□□□□ -0.19
PSEN1-207ENST00000553599 IGHV3-16A0A0C4DH30 117 aa13.88□□□□□ -0.19
PSEN1-207ENST00000553599 PLAC8L1A1L4L8 177 aa13.88□□□□□ -0.19
PSEN1-207ENST00000553599 XKRY2A2RUG3 117 aa13.88□□□□□ -0.19
PSEN1-207ENST00000553599 F8W036 122 aa13.88□□□□□ -0.19
PSEN1-207ENST00000553599 M0R036 132 aa13.88□□□□□ -0.19
PSEN1-207ENST00000553599 GNRH2O43555 120 aa13.88□□□□□ -0.19
PSEN1-207ENST00000553599 ASIPP42127 132 aa13.88□□□□□ -0.19
PSEN1-207ENST00000553599 DAZ2Q13117 558 aaKnown RBP13.88□□□□□ -0.19
PSEN1-207ENST00000553599 ADIRFQ15847 76 aa13.88□□□□□ -0.19
PSEN1-207ENST00000553599 NUDT10Q8NFP7 164 aa13.88□□□□□ -0.19
PSEN1-207ENST00000553599 ISOC2Q96AB3 205 aa13.88□□□□□ -0.19
PSEN1-207ENST00000553599 NUDT11Q96G61 164 aa13.88□□□□□ -0.19
PSEN1-207ENST00000553599 SPXQ9BT56 116 aa13.88□□□□□ -0.19
PSEN1-207ENST00000553599 A0A0J9YWU9 116 aa13.87□□□□□ -0.19
PSEN1-207ENST00000553599 LYRM9A8MSI8 78 aa13.87□□□□□ -0.19
PSEN1-207ENST00000553599 ERVFC1-1P60608 527 aa13.87□□□□□ -0.19
PSEN1-207ENST00000553599 C15orf54Q8N8G6 183 aa13.87□□□□□ -0.19
PSEN1-207ENST00000553599 GSN-AS1Q9NRJ2 163 aa13.87□□□□□ -0.19
PSEN1-207ENST00000553599 OSTCQ9NRP0 149 aa13.87□□□□□ -0.19
PSEN1-207ENST00000553599 HUWE1Q7Z6Z7 4374 aaKnown RBP13.86□□□□□ -0.19
PSEN1-207ENST00000553599 S100A4P26447 101 aaKnown RBP13.86□□□□□ -0.19
PSEN1-207ENST00000553599 EMP1P54849 157 aa13.86□□□□□ -0.19
PSEN1-207ENST00000553599 CT83Q5H943 113 aa13.86□□□□□ -0.19
PSEN1-207ENST00000553599 OR2D3Q8NGH3 330 aa13.86□□□□□ -0.19
PSEN1-207ENST00000553599 IL17DQ8TAD2 202 aa13.86□□□□□ -0.19
PSEN1-207ENST00000553599 RNASE7Q9H1E1 156 aaKnown RBP13.86□□□□□ -0.19
PSEN1-207ENST00000553599 RPP21Q9H633 154 aaKnown RBP13.86□□□□□ -0.19
PSEN1-207ENST00000553599 MDFICQ9P1T7 246 aa13.86□□□□□ -0.19
PSEN1-207ENST00000553599 DEFB4AO15263 64 aa13.85□□□□□ -0.19
PSEN1-207ENST00000553599 GATCO43716 136 aaKnown RBP13.85□□□□□ -0.19
PSEN1-207ENST00000553599 SPART-AS1P0CW21 52 aa13.85□□□□□ -0.19
PSEN1-207ENST00000553599 MED14OSP0DP75 135 aa13.85□□□□□ -0.19
PSEN1-207ENST00000553599 LGALS9BQ3B8N2 356 aa13.85□□□□□ -0.19
PSEN1-207ENST00000553599 C10orf91Q5T1B1 145 aa13.85□□□□□ -0.19
PSEN1-207ENST00000553599 SFRP2Q96HF1 295 aa13.85□□□□□ -0.19
PSEN1-207ENST00000553599 EDA2RQ9HAV5 297 aa13.85□□□□□ -0.19
PSEN1-207ENST00000553599 IL36BQ9NZH7 164 aa13.85□□□□□ -0.19
PSEN1-207ENST00000553599 DKK2Q9UBU2 259 aa13.85□□□□□ -0.19
PSEN1-207ENST00000553599 STAB2Q8WWQ8 2551 aa13.84□□□□□ -0.19
PSEN1-207ENST00000553599 TMSB15BA0A087X1C1 80 aa13.84□□□□□ -0.19
PSEN1-207ENST00000553599 ADCYAP1P18509 176 aa13.84□□□□□ -0.19
PSEN1-207ENST00000553599 C9orf85Q96MD7 179 aa13.84□□□□□ -0.19
PSEN1-207ENST00000553599 CXorf65A6NEN9 183 aa13.83□□□□□ -0.2
PSEN1-207ENST00000553599 RNASE3P12724 160 aaKnown RBP13.83□□□□□ -0.2
PSEN1-207ENST00000553599 RPL19P84098 196 aaKnown RBP13.83□□□□□ -0.2
PSEN1-207ENST00000553599 FAM222AQ5U5X8 452 aa13.83□□□□□ -0.2
PSEN1-207ENST00000553599 ZNF575Q86XF7 245 aa13.83□□□□□ -0.2
PSEN1-207ENST00000553599 PTH2Q96A98 100 aa13.83□□□□□ -0.2
PSEN1-207ENST00000553599 NDUFAF3Q9BU61 184 aa13.83□□□□□ -0.2
PSEN1-207ENST00000553599 NOP10Q9NPE3 64 aaKnown RBP13.83□□□□□ -0.2
PSEN1-207ENST00000553599 CARHSP1Q9Y2V2 147 aaKnown RBP13.83□□□□□ -0.2
PSEN1-207ENST00000553599 GRIFINA4D1Z8 144 aa13.82□□□□□ -0.2
PSEN1-207ENST00000553599 A8MWL6 223 aa13.82□□□□□ -0.2
PSEN1-207ENST00000553599 SPINK4O60575 86 aa13.82□□□□□ -0.2
PSEN1-207ENST00000553599 OR10G8Q8NGN5 311 aa13.82□□□□□ -0.2
PSEN1-207ENST00000553599 C11orf45Q8TAV5 145 aa13.82□□□□□ -0.2
PSEN1-207ENST00000553599 A0A1W2PPQ1 181 aa13.81□□□□□ -0.2
PSEN1-207ENST00000553599 M0R2P5 195 aa13.81□□□□□ -0.2
PSEN1-207ENST00000553599 OR5AL1P0C617 328 aa13.81□□□□□ -0.2
PSEN1-207ENST00000553599 ARMS2P0C7Q2 107 aa13.81□□□□□ -0.2
PSEN1-207ENST00000553599 PIK3CD-AS1Q5SR53 167 aa13.81□□□□□ -0.2
PSEN1-207ENST00000553599 LINC00612Q8N6U2 182 aa13.81□□□□□ -0.2
PSEN1-207ENST00000553599 SSBP4Q9BWG4 385 aaPredicted RBP13.81□□□□□ -0.2
PSEN1-207ENST00000553599 SCRT2Q9NQ03 307 aa13.81□□□□□ -0.2
PSEN1-207ENST00000553599 FAM231BA6NCW3 169 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms