RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 RBMY1FQ15415 496 aaKnown RBP9.05□□□□□ -0.96
SYNE2-208ENST00000553289 C17orf77Q96MU5 243 aa9.05□□□□□ -0.96
SYNE2-208ENST00000553289 CFHR4Q92496 578 aa9.05□□□□□ -0.96
SYNE2-208ENST00000553289 TSSC4Q9Y5U2 329 aaPredicted RBP9.05□□□□□ -0.96
SYNE2-208ENST00000553289 GPR179Q6PRD1 2367 aa9.05□□□□□ -0.96
SYNE2-208ENST00000553289 RPL32P62910 135 aaKnown RBP9.05□□□□□ -0.96
SYNE2-208ENST00000553289 ETDBQ3ZM63 59 aa9.05□□□□□ -0.96
SYNE2-208ENST00000553289 DOCK11Q5JSL3 2073 aa9.05□□□□□ -0.96
SYNE2-208ENST00000553289 IGLV11-55A0A075B6I3 123 aa9.04□□□□□ -0.96
SYNE2-208ENST00000553289 PRSS29PA6NIE9 313 aa9.04□□□□□ -0.96
SYNE2-208ENST00000553289 J3QKU1 62 aa9.04□□□□□ -0.96
SYNE2-208ENST00000553289 DKK2Q9UBU2 259 aa9.04□□□□□ -0.96
SYNE2-208ENST00000553289 USF3Q68DE3 2245 aa9.04□□□□□ -0.96
SYNE2-208ENST00000553289 HERV-K104P63124 156 aa9.04□□□□□ -0.96
SYNE2-208ENST00000553289 HOXD3P31249 432 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-208ENST00000553289 TMEM126AQ9H061 195 aa9.04□□□□□ -0.96
SYNE2-208ENST00000553289 ABCA1O95477 2261 aa9.04□□□□□ -0.96
SYNE2-208ENST00000553289 DOPEY2Q9Y3R5 2298 aa9.04□□□□□ -0.96
SYNE2-208ENST00000553289 KIR2DL5BA0A0G2JN68 375 aa9.03□□□□□ -0.96
SYNE2-208ENST00000553289 KIR2DL5BA0A0G2JPC4 375 aa9.03□□□□□ -0.96
SYNE2-208ENST00000553289 K7EIM0 57 aa9.03□□□□□ -0.96
SYNE2-208ENST00000553289 KIR2DL5AQ8N109 375 aa9.03□□□□□ -0.96
SYNE2-208ENST00000553289 DEFB112Q30KQ8 113 aa9.03□□□□□ -0.96
SYNE2-208ENST00000553289 C12orf74Q32Q52 190 aa9.03□□□□□ -0.96
SYNE2-208ENST00000553289 C9orf153Q5TBE3 101 aa9.03□□□□□ -0.96
SYNE2-208ENST00000553289 IGHV7-81A0A0B4J1V7 117 aa9.03□□□□□ -0.96
SYNE2-208ENST00000553289 PRSS47A8MTI9 375 aa9.03□□□□□ -0.96
SYNE2-208ENST00000553289 MORN5Q5VZ52 161 aa9.03□□□□□ -0.96
SYNE2-208ENST00000553289 SCRT2Q9NQ03 307 aa9.03□□□□□ -0.96
SYNE2-208ENST00000553289 CARD19Q96LW7 228 aa9.02□□□□□ -0.97
SYNE2-208ENST00000553289 DKK4Q9UBT3 224 aa9.02□□□□□ -0.97
SYNE2-208ENST00000553289 CACNA1BQ00975 2339 aa9.02□□□□□ -0.97
SYNE2-208ENST00000553289 PLXND1Q9Y4D7 1925 aa9.02□□□□□ -0.97
SYNE2-208ENST00000553289 GNRH2O43555 120 aa9.02□□□□□ -0.97
SYNE2-208ENST00000553289 ABCA4P78363 2273 aa9.02□□□□□ -0.97
SYNE2-208ENST00000553289 CRLF1O75462 422 aa9.02□□□□□ -0.97
SYNE2-208ENST00000553289 IGKV1-17P01599 117 aa9.02□□□□□ -0.97
SYNE2-208ENST00000553289 IGF2BP2-AS1Q96M15 143 aa9.02□□□□□ -0.97
SYNE2-208ENST00000553289 NPSP0C0P6 89 aa9.02□□□□□ -0.97
SYNE2-208ENST00000553289 PRSS33Q8NF86 280 aa9.02□□□□□ -0.97
SYNE2-208ENST00000553289 DOCK7Q96N67 2140 aa9.01□□□□□ -0.97
SYNE2-208ENST00000553289 NXPH4O95158 308 aa9.01□□□□□ -0.97
SYNE2-208ENST00000553289 DSCR8Q96T75 97 aa9.01□□□□□ -0.97
SYNE2-208ENST00000553289 U3KQE9 123 aa9.01□□□□□ -0.97
SYNE2-208ENST00000553289 IGHV4-59P01825 116 aa9.01□□□□□ -0.97
SYNE2-208ENST00000553289 IGHG4P01861 327 aa9.01□□□□□ -0.97
SYNE2-208ENST00000553289 ANGP03950 147 aaKnown RBP9.01□□□□□ -0.97
SYNE2-208ENST00000553289 IFITM1P13164 125 aa9.01□□□□□ -0.97
SYNE2-208ENST00000553289 SLC25A29Q8N8R3 303 aa9.01□□□□□ -0.97
SYNE2-208ENST00000553289 CFC1BP0CG36 223 aa9.01□□□□□ -0.97
SYNE2-208ENST00000553289 CFC1P0CG37 223 aa9.01□□□□□ -0.97
SYNE2-208ENST00000553289 C16orf54Q6UWD8 224 aa9.01□□□□□ -0.97
SYNE2-208ENST00000553289 TEX48A0A1B0GUV7 120 aa9□□□□□ -0.97
SYNE2-208ENST00000553289 F6UB75 175 aa9□□□□□ -0.97
SYNE2-208ENST00000553289 CTSGP08311 255 aa9□□□□□ -0.97
SYNE2-208ENST00000553289 PATE2Q6UY27 113 aa9□□□□□ -0.97
SYNE2-208ENST00000553289 CCL24O00175 119 aa9□□□□□ -0.97
SYNE2-208ENST00000553289 KLF2Q9Y5W3 355 aaPredicted RBP9□□□□□ -0.97
SYNE2-208ENST00000553289 WI2-2373I1.2A0A1W2PRP0 233 aa9□□□□□ -0.97
SYNE2-208ENST00000553289 MED14OSP0DP75 135 aa9□□□□□ -0.97
SYNE2-208ENST00000553289 WT1P19544 449 aaPredicted RBP9□□□□□ -0.97
SYNE2-208ENST00000553289 ARFGEF3Q5TH69 2177 aa9□□□□□ -0.97
SYNE2-208ENST00000553289 TRBV6-1A0A0K0K1D8 114 aa8.99□□□□□ -0.97
SYNE2-208ENST00000553289 BUB3O43684 328 aa8.99□□□□□ -0.97
SYNE2-208ENST00000553289 CRYGCP07315 174 aa8.99□□□□□ -0.97
SYNE2-208ENST00000553289 Q6ZVH6 145 aa8.99□□□□□ -0.97
SYNE2-208ENST00000553289 DEFB125Q8N687 156 aa8.99□□□□□ -0.97
SYNE2-208ENST00000553289 SPANXCQ9NY87 97 aa8.99□□□□□ -0.97
SYNE2-208ENST00000553289 NOTCH4Q99466 2003 aa8.99□□□□□ -0.97
SYNE2-208ENST00000553289 SPRNQ5BIV9 151 aa8.99□□□□□ -0.97
SYNE2-208ENST00000553289 PKIGQ9Y2B9 76 aa8.99□□□□□ -0.97
SYNE2-208ENST00000553289 H3BMG7 143 aa8.99□□□□□ -0.97
SYNE2-208ENST00000553289 TMEM89A2RUT3 159 aa8.99□□□□□ -0.97
SYNE2-208ENST00000553289 GAGE12HA6NDE8 117 aa8.99□□□□□ -0.97
SYNE2-208ENST00000553289 C16orf74Q96GX8 76 aa8.99□□□□□ -0.97
SYNE2-208ENST00000553289 NOP10Q9NPE3 64 aaKnown RBP8.99□□□□□ -0.97
SYNE2-208ENST00000553289 CADP27708 2225 aa8.99□□□□□ -0.97
SYNE2-208ENST00000553289 K7EMT4 169 aa8.98□□□□□ -0.97
SYNE2-208ENST00000553289 SH2D6Q7Z4S9 175 aa8.98□□□□□ -0.97
SYNE2-208ENST00000553289 FAM167A-AS1Q96KT0 104 aa8.98□□□□□ -0.97
SYNE2-208ENST00000553289 SPTAN1Q13813 2472 aaKnown RBP8.98□□□□□ -0.97
SYNE2-208ENST00000553289 K7ERJ3 54 aa8.98□□□□□ -0.97
SYNE2-208ENST00000553289 GRNP28799 593 aaKnown RBP8.98□□□□□ -0.97
SYNE2-208ENST00000553289 ASPHD1Q5U4P2 390 aa8.98□□□□□ -0.97
SYNE2-208ENST00000553289 SUMO4Q6EEV6 95 aa8.98□□□□□ -0.97
SYNE2-208ENST00000553289 Q8N9W7 124 aa8.98□□□□□ -0.97
SYNE2-208ENST00000553289 AJUBAQ96IF1 538 aa8.98□□□□□ -0.97
SYNE2-208ENST00000553289 IGHV4-61A0A0C4DH41 118 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 HAMPP81172 84 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 C9orf47Q6ZRZ4 202 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 CITED1Q99966 193 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 Q9H8V8 135 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 MALRD1Q5VYJ5 2156 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 EP400Q96L91 3159 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 ACYP1P07311 99 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 DAZ2Q13117 558 aaKnown RBP8.97□□□□□ -0.97
SYNE2-208ENST00000553289 DEFB113Q30KQ7 82 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 DAZ4Q86SG3 579 aaKnown RBP8.97□□□□□ -0.97
SYNE2-208ENST00000553289 DAZ3Q9NR90 486 aaKnown RBP8.97□□□□□ -0.97
SYNE2-208ENST00000553289 IGLV2-23P01705 113 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms