RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	TRAV8-1	A0A0A6YYK1	113 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	TEX48	A0A1B0GUV7	120 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	PLAC8L1	A1L4L8	177 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	FAM74A7	A6NL05	159 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422		J3KRW8	73 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	ZNF324	O75467	553 aa	Predicted RBP	4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	PRM2	P04554	102 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	GPX1	P07203	203 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	RAB5C	P51148	216 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	EMP1	P54849	157 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	GNG5	P63218	68 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	BTN1A1	Q13410	526 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	PRR9	Q5T870	116 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	EIF5AL1	Q6IS14	154 aa	Known RBP	4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	ZNF493	Q6ZR52	646 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	GOLT1A	Q6ZVE7	132 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	SLC51B	Q86UW2	128 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	CYB561D1	Q8N8Q1	229 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	FAM213B	Q8TBF2	198 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	TMEM263	Q8WUH6	116 aa	Known RBP	4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	SFT2D1	Q8WV19	159 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	MBD3L1	Q8WWY6	194 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	C16orf74	Q96GX8	76 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	LINC01587	Q99440	93 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	PYGO2	Q9BRQ0	406 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	NIPSNAP3B	Q9BS92	247 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	ATG101	Q9BSB4	218 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	NKX6-2	Q9C056	277 aa	Predicted RBP	4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	EPDR1	Q9UM22	224 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	RPH3AL	Q9UNE2	315 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	TRAV1-1	A0A0B4J248	108 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	C11orf94	C9JXX5	98 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422		K7EQM0	130 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	IGLV2-11	P01706	119 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	SPART-AS1	P0CW21	52 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	HTN1	P15515	57 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	AZU1	P20160	251 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	BTF3	P20290	206 aa	Known RBP	4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	RNASE4	P34096	147 aa	Known RBP	4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	UBE2G2	P60604	165 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	C12orf74	Q32Q52	190 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	FAM222A	Q5U5X8	452 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422		Q6AWC8	147 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422		Q6ZTC4	211 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	TMEM75	Q8N9X5	138 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	LINC00467	Q9BRT7	94 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	TCEAL7	Q9BRU2	100 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	DNAH6	Q9C0G6	4158 aa		4.72	□□□□□ -1.65
CNOT2-238	ENST00000552422	FBLL1	A6NHQ2	334 aa	Known RBP	4.71	□□□□□ -1.66
CNOT2-238	ENST00000552422	LYRM9	A8MSI8	78 aa		4.71	□□□□□ -1.66
CNOT2-238	ENST00000552422	SULT1A2	P50226	295 aa		4.71	□□□□□ -1.66
CNOT2-238	ENST00000552422	NKX2-5	P52952	324 aa	Predicted RBP	4.71	□□□□□ -1.66
CNOT2-238	ENST00000552422	FLI1	Q01543	452 aa	Predicted RBP	4.71	□□□□□ -1.66
CNOT2-238	ENST00000552422	TWIST1	Q15672	202 aa		4.71	□□□□□ -1.66
CNOT2-238	ENST00000552422	ANXA2R	Q3ZCQ2	193 aa		4.71	□□□□□ -1.66
CNOT2-238	ENST00000552422		Q6ZQT7	251 aa		4.71	□□□□□ -1.66
CNOT2-238	ENST00000552422	ZNF767P	Q75MW2	155 aa		4.71	□□□□□ -1.66
CNOT2-238	ENST00000552422	CCDC28A	Q8IWP9	274 aa		4.71	□□□□□ -1.66
CNOT2-238	ENST00000552422	ZNF680	Q8NEM1	530 aa		4.71	□□□□□ -1.66
CNOT2-238	ENST00000552422	HIST1H2BA	Q96A08	127 aa		4.71	□□□□□ -1.66
CNOT2-238	ENST00000552422	TVP23C	Q96ET8	276 aa		4.71	□□□□□ -1.66
CNOT2-238	ENST00000552422	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.71	□□□□□ -1.66
CNOT2-238	ENST00000552422	IGHV1OR15-1	A0A075B7D0	117 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	TRAV10	A0A0B4J240	114 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422		A0A1B0GV50	99 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422		F6UZH7	168 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	PEX7	O00628	323 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	PAGE4	O60829	102 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	IFNA7	P01567	189 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	ATP5G3	P48201	142 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	PPT1	P50897	306 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	DAD1	P61803	113 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	TDRG1	Q3Y452	100 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	CST9LP1	Q5W188	147 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422		Q86TA4	180 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	EIF4E3	Q8N5X7	224 aa	Known RBP	4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	LINC00612	Q8N6U2	182 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	C11orf72	Q8NBR9	251 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	C2CD4C	Q8TF44	421 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	SGK494	Q96LW2	274 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	NDFIP1	Q9BT67	221 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	KRTAP1-5	Q9BYS1	174 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	TREM1	Q9NP99	234 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	NOP10	Q9NPE3	64 aa	Known RBP	4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	MANBAL	Q9NQG1	85 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	PSG8	Q9UQ74	426 aa		4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	KLK5	Q9Y337	293 aa	Predicted RBP	4.7	□□□□□ -1.66
CNOT2-238	ENST00000552422	FRAS1	Q86XX4	4008 aa		4.69	□□□□□ -1.66
CNOT2-238	ENST00000552422	DEFB131B	A0A096LNP1	70 aa		4.69	□□□□□ -1.66
CNOT2-238	ENST00000552422	TRAV34	A0A0B4J273	112 aa		4.69	□□□□□ -1.66
CNOT2-238	ENST00000552422	LCE6A	A0A183	80 aa		4.69	□□□□□ -1.66
CNOT2-238	ENST00000552422	CBY3	A6NI87	242 aa		4.69	□□□□□ -1.66
CNOT2-238	ENST00000552422	SNURFL	B1AK76	121 aa		4.69	□□□□□ -1.66
CNOT2-238	ENST00000552422	TEX46	H3BTG2	121 aa		4.69	□□□□□ -1.66
CNOT2-238	ENST00000552422	PFN1	P07737	140 aa	Known RBP	4.69	□□□□□ -1.66
CNOT2-238	ENST00000552422	TCL1A	P56279	114 aa		4.69	□□□□□ -1.66
CNOT2-238	ENST00000552422	TCTA	P57738	103 aa		4.69	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms