RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 AGPAT2O15120 278 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 COX7A2P2O60397 106 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 S100A9P06702 114 aaKnown RBP3.46□□□□□ -1.86
HOXB3-213ENST00000552000 PFN1P07737 140 aaKnown RBP3.46□□□□□ -1.86
HOXB3-213ENST00000552000 GATA1P15976 413 aaPredicted RBP3.46□□□□□ -1.86
HOXB3-213ENST00000552000 CRISP2P16562 243 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 SRPXP78539 464 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 TMEM183BQ1AE95 376 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 LELP1Q5T871 98 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 CD164L2Q6UWJ8 174 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 FAM159AQ6UWV7 190 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 DAZ4Q86SG3 579 aaKnown RBP3.46□□□□□ -1.86
HOXB3-213ENST00000552000 CLVS1Q8IUQ0 354 aaPredicted RBP3.46□□□□□ -1.86
HOXB3-213ENST00000552000 TMEM183AQ8IXX5 376 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 ZFAND2AQ8N6M9 145 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 Q8N976 141 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 OR4C5Q8NGB2 326 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 ATP6V0E2Q8NHE4 81 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 RASL10AQ92737 203 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 FAM19A4Q96LR4 140 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 LINC00477Q96M19 166 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 PRRT1Q99946 306 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 PAXXQ9BUH6 204 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 DAZ3Q9NR90 486 aaKnown RBP3.46□□□□□ -1.86
HOXB3-213ENST00000552000 RPH3ALQ9UNE2 315 aa3.46□□□□□ -1.86
HOXB3-213ENST00000552000 IGKV2D-24A0A075B6R9 120 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 IGKV2-40A0A087WW87 121 aaPredicted RBP3.45□□□□□ -1.86
HOXB3-213ENST00000552000 GOSR2O14653 212 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 IGKV2D-40P01614 121 aaPredicted RBP3.45□□□□□ -1.86
HOXB3-213ENST00000552000 STAG3L3P0CL85 134 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 AKAIN1P0CW23 69 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 SMIM18P0DKX4 95 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 ANXA3P12429 323 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 NCS1P62166 190 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 PXDC1Q5TGL8 231 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 C10orf113Q5VZT2 155 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 ERASQ7Z444 233 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 RAB2BQ8WUD1 216 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 YIPF6Q96EC8 236 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 MRPL53Q96EL3 112 aaKnown RBP3.45□□□□□ -1.86
HOXB3-213ENST00000552000 DNAJC30Q96LL9 226 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 SRRQ9GZT4 340 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 DPH3P1Q9H4G8 78 aa3.45□□□□□ -1.86
HOXB3-213ENST00000552000 CCDC59Q9P031 241 aaKnown RBP3.45□□□□□ -1.86
HOXB3-213ENST00000552000 DUXBA0A1W2PPF3 345 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 FABP12A6NFH5 140 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 GGTLC3B5MD39 225 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 K7EPK0 472 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 NMBP08949 121 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 METTL15P1P0C7V9 234 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 SLC25A6P12236 298 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 VBP1P61758 197 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 POLR2GP62487 172 aaKnown RBP eCLIP3.44□□□□□ -1.86
HOXB3-213ENST00000552000 SSBP1Q04837 148 aaKnown RBP3.44□□□□□ -1.86
HOXB3-213ENST00000552000 GUK1Q16774 197 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 TMEM78Q5T7P6 136 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 FAM122CQ6P4D5 195 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 ZNF546Q86UE3 836 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 SLC25A29Q8N8R3 303 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 C15orf40Q8WUR7 153 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 RMI2Q96E14 147 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 SCGB3A2Q96PL1 93 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 SOSTQ9BQB4 213 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 PRADC1Q9BSG0 188 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 GTSF1LQ9H1H1 148 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 NPVFQ9HCQ7 196 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 MCUBQ9NWR8 336 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 PSENENQ9NZ42 101 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 SCP2D1Q9UJQ7 156 aa3.44□□□□□ -1.86
HOXB3-213ENST00000552000 TRBV19A0A075B6N1 114 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 TRAV8-1A0A0A6YYK1 113 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 A0A0D9SG52 128 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 FBLL1A6NHQ2 334 aaKnown RBP3.43□□□□□ -1.86
HOXB3-213ENST00000552000 PANO1I0J062 215 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 M0R2P5 195 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 SSSCA1O60232 199 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 ZNF253O75346 499 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 HIST1H1EP10412 219 aaKnown RBP3.43□□□□□ -1.86
HOXB3-213ENST00000552000 UBE2MP61081 183 aaKnown RBP3.43□□□□□ -1.86
HOXB3-213ENST00000552000 PNRC1Q12796 327 aaPredicted RBP3.43□□□□□ -1.86
HOXB3-213ENST00000552000 RHOHQ15669 191 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 FFAR4Q5NUL3 377 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 MIC13Q5XKP0 118 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 EXOC3-AS1Q8N2X6 119 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 HSD17B11Q8NBQ5 300 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 Q8TAT8 98 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 SMIM4Q8WVI0 70 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 TMEM18Q96B42 140 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 MGST2Q99735 147 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 ZNF492Q9P255 531 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 NAGKQ9UJ70 344 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 PRELID1Q9Y255 219 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 TIMM9Q9Y5J7 89 aa3.43□□□□□ -1.86
HOXB3-213ENST00000552000 IGHV3-73A0A0B4J1V6 119 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 PIGBOS1A0A0B4J2F0 54 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 FNDC10F2Z333 226 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 RHODO00212 210 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 GNRH2O43555 120 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 OR10J4P0C629 311 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 PYYP10082 97 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms