RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 RNF213Q63HN8 5207 aa6.86□□□□□ -1.31
VPS29-208ENST00000550267 TRGV11A0A075B6L2 103 aa6.85□□□□□ -1.31
VPS29-208ENST00000550267 M0R2P5 195 aa6.85□□□□□ -1.31
VPS29-208ENST00000550267 MBPP02686 304 aaPredicted RBP6.85□□□□□ -1.31
VPS29-208ENST00000550267 PFN1P07737 140 aaKnown RBP6.85□□□□□ -1.31
VPS29-208ENST00000550267 MT1HL1P0DM35 61 aa6.85□□□□□ -1.31
VPS29-208ENST00000550267 RPL29P47914 159 aaKnown RBP6.85□□□□□ -1.31
VPS29-208ENST00000550267 RPL37AP61513 92 aaKnown RBP6.85□□□□□ -1.31
VPS29-208ENST00000550267 ASAH1Q13510 395 aa6.85□□□□□ -1.31
VPS29-208ENST00000550267 BAK1Q16611 211 aa6.85□□□□□ -1.31
VPS29-208ENST00000550267 PYDC2Q56P42 97 aa6.85□□□□□ -1.31
VPS29-208ENST00000550267 FAM159AQ6UWV7 190 aa6.85□□□□□ -1.31
VPS29-208ENST00000550267 SLC25A29Q8N8R3 303 aa6.85□□□□□ -1.31
VPS29-208ENST00000550267 DAZAP1Q96EP5 407 aaKnown RBP6.85□□□□□ -1.31
VPS29-208ENST00000550267 GPN1Q9HCN4 374 aaPredicted RBP6.85□□□□□ -1.31
VPS29-208ENST00000550267 NAGKQ9UJ70 344 aa6.85□□□□□ -1.31
VPS29-208ENST00000550267 TMA7Q9Y2S6 64 aaKnown RBP6.85□□□□□ -1.31
VPS29-208ENST00000550267 TRBV7-9A0A0J9YWB2 115 aa6.84□□□□□ -1.31
VPS29-208ENST00000550267 L7N2F9 121 aa6.84□□□□□ -1.31
VPS29-208ENST00000550267 GNRH2O43555 120 aa6.84□□□□□ -1.31
VPS29-208ENST00000550267 CST7O76096 145 aa6.84□□□□□ -1.31
VPS29-208ENST00000550267 BCAP31P51572 246 aa6.84□□□□□ -1.31
VPS29-208ENST00000550267 VAMP2P63027 116 aa6.84□□□□□ -1.31
VPS29-208ENST00000550267 BAXQ07812 192 aa6.84□□□□□ -1.31
VPS29-208ENST00000550267 ACOT6Q3I5F7 207 aaPredicted RBP6.84□□□□□ -1.31
VPS29-208ENST00000550267 GCSAMLQ5JQS6 135 aa6.84□□□□□ -1.31
VPS29-208ENST00000550267 Q6AWC8 147 aa6.84□□□□□ -1.31
VPS29-208ENST00000550267 DAZ4Q86SG3 579 aaKnown RBP6.84□□□□□ -1.31
VPS29-208ENST00000550267 SLC25A2Q9BXI2 301 aa6.84□□□□□ -1.31
VPS29-208ENST00000550267 SLIRPQ9GZT3 109 aaKnown RBP6.84□□□□□ -1.31
VPS29-208ENST00000550267 DAZ3Q9NR90 486 aaKnown RBP6.84□□□□□ -1.31
VPS29-208ENST00000550267 UQCC1Q9NVA1 299 aa6.84□□□□□ -1.31
VPS29-208ENST00000550267 FLVCR2Q9UPI3 526 aa6.84□□□□□ -1.31
VPS29-208ENST00000550267 LRP2P98164 4655 aa6.83□□□□□ -1.32
VPS29-208ENST00000550267 TRAV8-3A0A0A6YYJ7 113 aa6.83□□□□□ -1.32
VPS29-208ENST00000550267 UBE2L5PA0A1B0GUS4 154 aa6.83□□□□□ -1.32
VPS29-208ENST00000550267 FAM24AA6NFZ4 105 aa6.83□□□□□ -1.32
VPS29-208ENST00000550267 FBLL1A6NHQ2 334 aaKnown RBP6.83□□□□□ -1.32
VPS29-208ENST00000550267 NBEAP1P0C6P0 100 aa6.83□□□□□ -1.32
VPS29-208ENST00000550267 PRADC1Q9BSG0 188 aa6.83□□□□□ -1.32
VPS29-208ENST00000550267 C20orf85Q9H1P6 137 aa6.83□□□□□ -1.32
VPS29-208ENST00000550267 IGHV3-73A0A0B4J1V6 119 aa6.82□□□□□ -1.32
VPS29-208ENST00000550267 RNF222A6NCQ9 220 aa6.82□□□□□ -1.32
VPS29-208ENST00000550267 CAV2P51636 162 aa6.82□□□□□ -1.32
VPS29-208ENST00000550267 RHOHQ15669 191 aa6.82□□□□□ -1.32
VPS29-208ENST00000550267 VWC2Q2TAL6 325 aa6.82□□□□□ -1.32
VPS29-208ENST00000550267 MIR17HGQ75NE6 70 aa6.82□□□□□ -1.32
VPS29-208ENST00000550267 Q8N976 141 aa6.82□□□□□ -1.32
VPS29-208ENST00000550267 ATP6V0E2Q8NHE4 81 aa6.82□□□□□ -1.32
VPS29-208ENST00000550267 PHYHIPLQ96FC7 376 aa6.82□□□□□ -1.32
VPS29-208ENST00000550267 FAM167A-AS1Q96KT0 104 aa6.82□□□□□ -1.32
VPS29-208ENST00000550267 GTSF1LQ9H1H1 148 aa6.82□□□□□ -1.32
VPS29-208ENST00000550267 LSM5Q9Y4Y9 91 aaKnown RBP6.82□□□□□ -1.32
VPS29-208ENST00000550267 V9GYH0 126 aa6.82□□□□□ -1.32
VPS29-208ENST00000550267 TRBV6-4A0A1B0GX49 114 aa6.81□□□□□ -1.32
VPS29-208ENST00000550267 C5orf51A6NDU8 294 aa6.81□□□□□ -1.32
VPS29-208ENST00000550267 CCSO14618 274 aa6.81□□□□□ -1.32
VPS29-208ENST00000550267 NDUFB6O95139 128 aa6.81□□□□□ -1.32
VPS29-208ENST00000550267 TYMSP04818 313 aa6.81□□□□□ -1.32
VPS29-208ENST00000550267 OR10J4P0C629 311 aa6.81□□□□□ -1.32
VPS29-208ENST00000550267 FGF7P21781 194 aa6.81□□□□□ -1.32
VPS29-208ENST00000550267 DEDD2Q8WXF8 326 aa6.81□□□□□ -1.32
VPS29-208ENST00000550267 FXYD5Q96DB9 178 aa6.81□□□□□ -1.32
VPS29-208ENST00000550267 DNAJC30Q96LL9 226 aa6.81□□□□□ -1.32
VPS29-208ENST00000550267 OR51M1Q9H341 326 aa6.81□□□□□ -1.32
VPS29-208ENST00000550267 RBAKDNA6NC62 111 aa6.8□□□□□ -1.32
VPS29-208ENST00000550267 GGTLC3B5MD39 225 aa6.8□□□□□ -1.32
VPS29-208ENST00000550267 IGLV2-11P01706 119 aa6.8□□□□□ -1.32
VPS29-208ENST00000550267 CSN1S1P47710 185 aa6.8□□□□□ -1.32
VPS29-208ENST00000550267 TOR2AQ5JU69 321 aa6.8□□□□□ -1.32
VPS29-208ENST00000550267 CFAP126Q5VTH2 177 aa6.8□□□□□ -1.32
VPS29-208ENST00000550267 DPPA3Q6W0C5 159 aa6.8□□□□□ -1.32
VPS29-208ENST00000550267 CHAC2Q8WUX2 184 aa6.8□□□□□ -1.32
VPS29-208ENST00000550267 C11orf1Q9H5F2 150 aa6.8□□□□□ -1.32
VPS29-208ENST00000550267 COX11Q9Y6N1 276 aa6.8□□□□□ -1.32
VPS29-208ENST00000550267 IGKV2D-24A0A075B6R9 120 aa6.79□□□□□ -1.32
VPS29-208ENST00000550267 IGSF23A1L1A6 192 aa6.79□□□□□ -1.32
VPS29-208ENST00000550267 RANP62826 216 aaKnown RBP6.79□□□□□ -1.32
VPS29-208ENST00000550267 MITD1Q8WV92 249 aa6.79□□□□□ -1.32
VPS29-208ENST00000550267 PAXXQ9BUH6 204 aa6.79□□□□□ -1.32
VPS29-208ENST00000550267 MRPS26Q9BYN8 205 aaKnown RBP6.79□□□□□ -1.32
VPS29-208ENST00000550267 LENEPQ9Y5L5 61 aa6.79□□□□□ -1.32
VPS29-208ENST00000550267 DIRC3C9JPN6 131 aa6.78□□□□□ -1.32
VPS29-208ENST00000550267 F6UZH7 168 aa6.78□□□□□ -1.32
VPS29-208ENST00000550267 S100A11P31949 105 aa6.78□□□□□ -1.32
VPS29-208ENST00000550267 ASIPP42127 132 aa6.78□□□□□ -1.32
VPS29-208ENST00000550267 SULT1A1P50225 295 aa6.78□□□□□ -1.32
VPS29-208ENST00000550267 TMBIM6P55061 237 aa6.78□□□□□ -1.32
VPS29-208ENST00000550267 ZNF876PQ49A33 203 aa6.78□□□□□ -1.32
VPS29-208ENST00000550267 RMI2Q96E14 147 aa6.78□□□□□ -1.32
VPS29-208ENST00000550267 NPCDR1Q9BY65 106 aa6.78□□□□□ -1.32
VPS29-208ENST00000550267 SDF2L1Q9HCN8 221 aa6.78□□□□□ -1.32
VPS29-208ENST00000550267 RPH3ALQ9UNE2 315 aa6.78□□□□□ -1.32
VPS29-208ENST00000550267 TRAV8-1A0A0A6YYK1 113 aa6.77□□□□□ -1.33
VPS29-208ENST00000550267 TRAV21A0A0B4J279 112 aa6.77□□□□□ -1.33
VPS29-208ENST00000550267 GAGE12JA6NER3 117 aa6.77□□□□□ -1.33
VPS29-208ENST00000550267 FAM25EA8MYX2 175 aa6.77□□□□□ -1.33
VPS29-208ENST00000550267 H3BMQ9 156 aa6.77□□□□□ -1.33
VPS29-208ENST00000550267 CIDEAO60543 219 aa6.77□□□□□ -1.33
VPS29-208ENST00000550267 GAGE1Q13065 139 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms