RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 IGHV3-16A0A0C4DH30 117 aa16.6■□□□□ 0.25
USP44-205ENST00000549639 RNF222A6NCQ9 220 aa16.6■□□□□ 0.25
USP44-205ENST00000549639 SIVA1O15304 175 aa16.6■□□□□ 0.25
USP44-205ENST00000549639 OR2T35Q8NGX2 323 aa16.6■□□□□ 0.25
USP44-205ENST00000549639 SH3BGRL3Q9H299 93 aa16.6■□□□□ 0.25
USP44-205ENST00000549639 TRAV4A0A0B4J268 109 aa16.59■□□□□ 0.25
USP44-205ENST00000549639 F6UZH7 168 aa16.59■□□□□ 0.25
USP44-205ENST00000549639 GNRH2O43555 120 aa16.59■□□□□ 0.25
USP44-205ENST00000549639 ORM1P02763 201 aa16.59■□□□□ 0.25
USP44-205ENST00000549639 RGS21Q2M5E4 152 aa16.59■□□□□ 0.25
USP44-205ENST00000549639 NEGR1Q7Z3B1 354 aa16.59■□□□□ 0.25
USP44-205ENST00000549639 ZNF479Q96JC4 524 aa16.59■□□□□ 0.25
USP44-205ENST00000549639 TYMSP04818 313 aa16.58■□□□□ 0.24
USP44-205ENST00000549639 SUMO1P63165 101 aaKnown RBP16.58■□□□□ 0.24
USP44-205ENST00000549639 RPL7L1Q6DKI1 246 aaKnown RBP16.58■□□□□ 0.24
USP44-205ENST00000549639 ZNF575Q86XF7 245 aa16.58■□□□□ 0.24
USP44-205ENST00000549639 PCNPQ8WW12 178 aaKnown RBP16.58■□□□□ 0.24
USP44-205ENST00000549639 EPDR1Q9UM22 224 aa16.58■□□□□ 0.24
USP44-205ENST00000549639 A0A1W2PRE2 83 aa16.57■□□□□ 0.24
USP44-205ENST00000549639 TAAR5O14804 337 aa16.57■□□□□ 0.24
USP44-205ENST00000549639 SFTA3P0C7M3 94 aa16.57■□□□□ 0.24
USP44-205ENST00000549639 ZFP69Q49AA0 526 aa16.57■□□□□ 0.24
USP44-205ENST00000549639 LYPD5Q6UWN5 251 aa16.57■□□□□ 0.24
USP44-205ENST00000549639 CYB561D1Q8N8Q1 229 aa16.57■□□□□ 0.24
USP44-205ENST00000549639 OR4C5Q8NGB2 326 aa16.57■□□□□ 0.24
USP44-205ENST00000549639 PSG8Q9UQ74 426 aa16.57■□□□□ 0.24
USP44-205ENST00000549639 NXPH4O95158 308 aa16.56■□□□□ 0.24
USP44-205ENST00000549639 SRIP30626 198 aa16.56■□□□□ 0.24
USP44-205ENST00000549639 FLI1Q01543 452 aaPredicted RBP16.56■□□□□ 0.24
USP44-205ENST00000549639 TMEM75Q8N9X5 138 aa16.56■□□□□ 0.24
USP44-205ENST00000549639 CTXND1A0A1B0GTU2 59 aa16.55■□□□□ 0.24
USP44-205ENST00000549639 C16orf90A8MZG2 172 aa16.55■□□□□ 0.24
USP44-205ENST00000549639 GGTLC3B5MD39 225 aa16.55■□□□□ 0.24
USP44-205ENST00000549639 C9JCJ5 164 aa16.55■□□□□ 0.24
USP44-205ENST00000549639 K7EQD1 137 aa16.55■□□□□ 0.24
USP44-205ENST00000549639 SAPCD1Q5SSQ6 148 aa16.55■□□□□ 0.24
USP44-205ENST00000549639 SGK494Q96LW2 274 aa16.55■□□□□ 0.24
USP44-205ENST00000549639 CIDEAO60543 219 aa16.54■□□□□ 0.24
USP44-205ENST00000549639 PFN1P07737 140 aaKnown RBP16.54■□□□□ 0.24
USP44-205ENST00000549639 SMUG1Q53HV7 270 aa16.54■□□□□ 0.24
USP44-205ENST00000549639 TXNDC17Q9BRA2 123 aa16.54■□□□□ 0.24
USP44-205ENST00000549639 NKX6-2Q9C056 277 aaPredicted RBP16.54■□□□□ 0.24
USP44-205ENST00000549639 K7EP13 123 aa16.53■□□□□ 0.24
USP44-205ENST00000549639 GCGP01275 180 aa16.53■□□□□ 0.24
USP44-205ENST00000549639 IGLV2-11P01706 119 aa16.53■□□□□ 0.24
USP44-205ENST00000549639 GYPEP15421 78 aa16.53■□□□□ 0.24
USP44-205ENST00000549639 SH2D6Q7Z4S9 175 aa16.53■□□□□ 0.24
USP44-205ENST00000549639 RYR1P21817 5038 aa16.53■□□□□ 0.24
USP44-205ENST00000549639 TRAV9-2A0A087WT02 112 aa16.52■□□□□ 0.24
USP44-205ENST00000549639 AKR1C8PQ5T2L2 129 aa16.52■□□□□ 0.24
USP44-205ENST00000549639 PRNTQ86SH4 94 aa16.52■□□□□ 0.24
USP44-205ENST00000549639 PCLOQ9Y6V0 5065 aa16.51■□□□□ 0.23
USP44-205ENST00000549639 PPT1P50897 306 aa16.51■□□□□ 0.23
USP44-205ENST00000549639 ZNF80P51504 273 aaPredicted RBP16.51■□□□□ 0.23
USP44-205ENST00000549639 LINC00315P59091 139 aa16.51■□□□□ 0.23
USP44-205ENST00000549639 ZNF726P1Q15940 193 aa16.5■□□□□ 0.23
USP44-205ENST00000549639 ZNF876PQ49A33 203 aa16.5■□□□□ 0.23
USP44-205ENST00000549639 PTH2Q96A98 100 aa16.5■□□□□ 0.23
USP44-205ENST00000549639 G3V3Q6 166 aa16.49■□□□□ 0.23
USP44-205ENST00000549639 IFNA7P01567 189 aa16.49■□□□□ 0.23
USP44-205ENST00000549639 KRTAP17-1Q9BYP8 105 aa16.49■□□□□ 0.23
USP44-205ENST00000549639 C11orf21Q9P2W6 132 aa16.49■□□□□ 0.23
USP44-205ENST00000549639 LY96Q9Y6Y9 160 aa16.49■□□□□ 0.23
USP44-205ENST00000549639 ARPC5O15511 151 aa16.48■□□□□ 0.23
USP44-205ENST00000549639 CDK2AP2O75956 126 aa16.48■□□□□ 0.23
USP44-205ENST00000549639 GATA1P15976 413 aaPredicted RBP16.48■□□□□ 0.23
USP44-205ENST00000549639 SPATA12Q7Z6I5 190 aa16.48■□□□□ 0.23
USP44-205ENST00000549639 NFE4Q86UQ8 179 aa16.48■□□□□ 0.23
USP44-205ENST00000549639 HIST1H2BAQ96A08 127 aa16.48■□□□□ 0.23
USP44-205ENST00000549639 LRP1BQ9NZR2 4599 aa16.47■□□□□ 0.23
USP44-205ENST00000549639 C9orf85Q96MD7 179 aa16.47■□□□□ 0.23
USP44-205ENST00000549639 TIRAPP58753 221 aa16.46■□□□□ 0.23
USP44-205ENST00000549639 Q6ZRN7 208 aaPredicted RBP16.46■□□□□ 0.23
USP44-205ENST00000549639 CYTL1Q9NRR1 136 aa16.46■□□□□ 0.23
USP44-205ENST00000549639 BOLA1Q9Y3E2 137 aa16.46■□□□□ 0.23
USP44-205ENST00000549639 FAM74A7A6NL05 159 aa16.45■□□□□ 0.22
USP44-205ENST00000549639 PEX7O00628 323 aa16.45■□□□□ 0.22
USP44-205ENST00000549639 RS1O15537 224 aa16.45■□□□□ 0.22
USP44-205ENST00000549639 EVI2AP22794 236 aa16.45■□□□□ 0.22
USP44-205ENST00000549639 CFAP126Q5VTH2 177 aa16.45■□□□□ 0.22
USP44-205ENST00000549639 ARL2-SNX15V9GYD0 113 aa16.45■□□□□ 0.22
USP44-205ENST00000549639 TRBV6-4A0A1B0GX49 114 aa16.44■□□□□ 0.22
USP44-205ENST00000549639 FABP5P3A8MUU1 101 aa16.44■□□□□ 0.22
USP44-205ENST00000549639 UBE2G2P60604 165 aa16.44■□□□□ 0.22
USP44-205ENST00000549639 STOML3Q8TAV4 291 aa16.44■□□□□ 0.22
USP44-205ENST00000549639 LINC00479Q96M42 142 aa16.44■□□□□ 0.22
USP44-205ENST00000549639 TCEAL7Q9BRU2 100 aa16.44■□□□□ 0.22
USP44-205ENST00000549639 PRADC1Q9BSG0 188 aa16.44■□□□□ 0.22
USP44-205ENST00000549639 MAP1LC3B2A6NCE7 125 aa16.43■□□□□ 0.22
USP44-205ENST00000549639 DNAH10OSP0CZ25 163 aa16.43■□□□□ 0.22
USP44-205ENST00000549639 FGF8P55075 233 aaPredicted RBP16.43■□□□□ 0.22
USP44-205ENST00000549639 ZNF345Q14585 488 aa16.43■□□□□ 0.22
USP44-205ENST00000549639 RHOHQ15669 191 aa16.43■□□□□ 0.22
USP44-205ENST00000549639 PIK3CD-AS1Q5SR53 167 aa16.43■□□□□ 0.22
USP44-205ENST00000549639 NHLRC2Q8NBF2 726 aa16.43■□□□□ 0.22
USP44-205ENST00000549639 MAP1LC3BQ9GZQ8 125 aa16.43■□□□□ 0.22
USP44-205ENST00000549639 TRAV34A0A0B4J273 112 aa16.42■□□□□ 0.22
USP44-205ENST00000549639 EREGO14944 169 aa16.42■□□□□ 0.22
USP44-205ENST00000549639 RNASE3P12724 160 aaKnown RBP16.42■□□□□ 0.22
USP44-205ENST00000549639 WFDC10BQ8IUB3 73 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms