RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 HLA-DQA1P01909 254 aa4.91□□□□□ -1.62
COX6A1-202ENST00000549525 TCRAP04437 139 aa4.91□□□□□ -1.62
COX6A1-202ENST00000549525 GP9P14770 177 aa4.91□□□□□ -1.62
COX6A1-202ENST00000549525 Q6AWC8 147 aa4.91□□□□□ -1.62
COX6A1-202ENST00000549525 TCF24Q7RTU0 167 aa4.91□□□□□ -1.62
COX6A1-202ENST00000549525 TMEM75Q8N9X5 138 aa4.91□□□□□ -1.62
COX6A1-202ENST00000549525 C12orf57Q99622 126 aa4.91□□□□□ -1.62
COX6A1-202ENST00000549525 FAM110AQ9BQ89 295 aa4.91□□□□□ -1.62
COX6A1-202ENST00000549525 NRN1Q9NPD7 142 aa4.91□□□□□ -1.62
COX6A1-202ENST00000549525 WNK1Q9H4A3 2382 aa4.91□□□□□ -1.62
COX6A1-202ENST00000549525 TRBV20OR9-2A0A075B6H5 130 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 TRBV19A0A075B6N1 114 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 TRAV5A0A0B4J249 113 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 RHODO00212 210 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 PHOX2AO14813 284 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 EIF3GO75821 320 aaKnown RBP eCLIP4.9□□□□□ -1.63
COX6A1-202ENST00000549525 LTAP01374 205 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 MGST1P10620 155 aaKnown RBP4.9□□□□□ -1.63
COX6A1-202ENST00000549525 IGLL1P15814 213 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 RAB4AP20338 218 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 Q0VG73 95 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 OR10J3Q5JRS4 329 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 HIST2H2BDQ6DRA6 164 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 TSKUQ8WUA8 353 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 FRZBQ92765 325 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 IGF2BP2-AS1Q96M15 143 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 SLC50A1Q9BRV3 221 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 DERL1Q9BUN8 251 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 Q9H3A6 140 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 V9GYV3 84 aa4.9□□□□□ -1.63
COX6A1-202ENST00000549525 A0A087X0K7 114 aa4.89□□□□□ -1.63
COX6A1-202ENST00000549525 IGHV3-49A0A0A0MS15 119 aa4.89□□□□□ -1.63
COX6A1-202ENST00000549525 IGLV5-39A0A0G2JS06 123 aa4.89□□□□□ -1.63
COX6A1-202ENST00000549525 K7EN84 100 aa4.89□□□□□ -1.63
COX6A1-202ENST00000549525 P01737 135 aa4.89□□□□□ -1.63
COX6A1-202ENST00000549525 CT45A10P0DMU9 189 aa4.89□□□□□ -1.63
COX6A1-202ENST00000549525 IGLC2P0DOY2 106 aa4.89□□□□□ -1.63
COX6A1-202ENST00000549525 PYYP10082 97 aa4.89□□□□□ -1.63
COX6A1-202ENST00000549525 FOXA3P55318 350 aaPredicted RBP4.89□□□□□ -1.63
COX6A1-202ENST00000549525 RPS20P60866 119 aaKnown RBP4.89□□□□□ -1.63
COX6A1-202ENST00000549525 DGAT2L7PQ6IED9 249 aa4.89□□□□□ -1.63
COX6A1-202ENST00000549525 COX8CQ7Z4L0 72 aa4.89□□□□□ -1.63
COX6A1-202ENST00000549525 BLNKQ8WV28 456 aa4.89□□□□□ -1.63
COX6A1-202ENST00000549525 BORCS7Q96B45 105 aa4.89□□□□□ -1.63
COX6A1-202ENST00000549525 MRPL53Q96EL3 112 aaKnown RBP4.89□□□□□ -1.63
COX6A1-202ENST00000549525 MS4A6AQ9H2W1 248 aa4.89□□□□□ -1.63
COX6A1-202ENST00000549525 ZNF256Q9Y2P7 627 aaPredicted RBP4.89□□□□□ -1.63
COX6A1-202ENST00000549525 ANK2Q01484 3957 aa4.89□□□□□ -1.63
COX6A1-202ENST00000549525 IGHV3OR16-13A0A075B7E8 117 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 IGHV3-74A0A0B4J1X5 117 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 IGHV3-66A0A0C4DH42 116 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 RBAKDNA6NC62 111 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 OR11H12B2RN74 326 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 SCGB1D1O95968 90 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 IGLV2-8P01709 118 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 APOHP02749 345 aaPredicted RBP4.88□□□□□ -1.63
COX6A1-202ENST00000549525 ESDP10768 282 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 CRISP2P16562 243 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 NUTF2P61970 127 aaKnown RBP4.88□□□□□ -1.63
COX6A1-202ENST00000549525 EGFEM1PQ0D2K5 195 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 LEMD1Q68G75 181 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 TMEM61Q8N0U2 210 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 HIST3H2BBQ8N257 126 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 ZNF414Q96IQ9 312 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 NDFIP1Q9BT67 221 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 RPP21Q9H633 154 aaKnown RBP4.88□□□□□ -1.63
COX6A1-202ENST00000549525 ZNF586Q9NXT0 402 aa4.88□□□□□ -1.63
COX6A1-202ENST00000549525 VWFP04275 2813 aa4.87□□□□□ -1.63
COX6A1-202ENST00000549525 TRRAPQ9Y4A5 3859 aa4.87□□□□□ -1.63
COX6A1-202ENST00000549525 IGKV3-7A0A075B6H7 116 aa4.87□□□□□ -1.63
COX6A1-202ENST00000549525 APCSP02743 223 aa4.87□□□□□ -1.63
COX6A1-202ENST00000549525 RIGQ13278 110 aa4.87□□□□□ -1.63
COX6A1-202ENST00000549525 PSG3Q16557 428 aa4.87□□□□□ -1.63
COX6A1-202ENST00000549525 IQCJQ1A5X6 159 aa4.87□□□□□ -1.63
COX6A1-202ENST00000549525 EBLN2Q6P2I7 272 aa4.87□□□□□ -1.63
COX6A1-202ENST00000549525 ADAMTSL5Q6ZMM2 481 aa4.87□□□□□ -1.63
COX6A1-202ENST00000549525 GBGT1Q8N5D6 347 aa4.87□□□□□ -1.63
COX6A1-202ENST00000549525 PPP1R14DQ9NXH3 145 aa4.87□□□□□ -1.63
COX6A1-202ENST00000549525 LENEPQ9Y5L5 61 aa4.87□□□□□ -1.63
COX6A1-202ENST00000549525 NOTCH3Q9UM47 2321 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 C19orf71A6NCJ1 209 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 SNURFLB1AK76 121 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 K7EQG2 157 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 MRPS12O15235 138 aaKnown RBP4.86□□□□□ -1.63
COX6A1-202ENST00000549525 DUSP14O95147 198 aaKnown RBP4.86□□□□□ -1.63
COX6A1-202ENST00000549525 PMCHP20382 165 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 TFPI2P48307 235 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 OR5I1Q13606 314 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 JOSD1Q15040 202 aaPredicted RBP4.86□□□□□ -1.63
COX6A1-202ENST00000549525 KPRPQ5T749 579 aaPredicted RBP4.86□□□□□ -1.63
COX6A1-202ENST00000549525 BAGE3Q86Y29 109 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 STHQ8IWL8 128 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 OR10D4PQ8NGN7 298 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 OR10J6PQ8NGY7 276 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 DCANP1Q8TF63 244 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 ASCL2Q99929 193 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 RNASE7Q9H1E1 156 aaKnown RBP4.86□□□□□ -1.63
COX6A1-202ENST00000549525 MAP6D1Q9H9H5 199 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 NIT2Q9NQR4 276 aa4.86□□□□□ -1.63
COX6A1-202ENST00000549525 PSG8Q9UQ74 426 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms