RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 RPL7L1Q6DKI1 246 aaKnown RBP12.82□□□□□ -0.36
CHMP1A-207ENST00000549328 OR2T35Q8NGX2 323 aa12.82□□□□□ -0.36
CHMP1A-207ENST00000549328 ZNF479Q96JC4 524 aa12.82□□□□□ -0.36
CHMP1A-207ENST00000549328 F6UZH7 168 aa12.81□□□□□ -0.36
CHMP1A-207ENST00000549328 M0R2P5 195 aa12.81□□□□□ -0.36
CHMP1A-207ENST00000549328 SIVA1O15304 175 aa12.81□□□□□ -0.36
CHMP1A-207ENST00000549328 RGS21Q2M5E4 152 aa12.81□□□□□ -0.36
CHMP1A-207ENST00000549328 SDF2L1Q9HCN8 221 aa12.81□□□□□ -0.36
CHMP1A-207ENST00000549328 EPDR1Q9UM22 224 aa12.81□□□□□ -0.36
CHMP1A-207ENST00000549328 DNAH11Q96DT5 4516 aa12.81□□□□□ -0.36
CHMP1A-207ENST00000549328 TRAV4A0A0B4J268 109 aa12.8□□□□□ -0.36
CHMP1A-207ENST00000549328 FBLL1A6NHQ2 334 aaKnown RBP12.8□□□□□ -0.36
CHMP1A-207ENST00000549328 SFTA3P0C7M3 94 aa12.8□□□□□ -0.36
CHMP1A-207ENST00000549328 NEGR1Q7Z3B1 354 aa12.8□□□□□ -0.36
CHMP1A-207ENST00000549328 ZNF575Q86XF7 245 aa12.8□□□□□ -0.36
CHMP1A-207ENST00000549328 SGK494Q96LW2 274 aa12.8□□□□□ -0.36
CHMP1A-207ENST00000549328 PSG8Q9UQ74 426 aa12.8□□□□□ -0.36
CHMP1A-207ENST00000549328 A0A1W2PRE2 83 aa12.79□□□□□ -0.36
CHMP1A-207ENST00000549328 GGTLC3B5MD39 225 aa12.79□□□□□ -0.36
CHMP1A-207ENST00000549328 IGLV2-11P01706 119 aa12.79□□□□□ -0.36
CHMP1A-207ENST00000549328 ORM1P02763 201 aa12.79□□□□□ -0.36
CHMP1A-207ENST00000549328 TYMSP04818 313 aa12.79□□□□□ -0.36
CHMP1A-207ENST00000549328 LYPD5Q6UWN5 251 aa12.79□□□□□ -0.36
CHMP1A-207ENST00000549328 TAAR5O14804 337 aa12.78□□□□□ -0.36
CHMP1A-207ENST00000549328 NXPH4O95158 308 aa12.78□□□□□ -0.36
CHMP1A-207ENST00000549328 FLI1Q01543 452 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-207ENST00000549328 CYB561D1Q8N8Q1 229 aa12.78□□□□□ -0.36
CHMP1A-207ENST00000549328 OR4C5Q8NGB2 326 aa12.78□□□□□ -0.36
CHMP1A-207ENST00000549328 CTXND1A0A1B0GTU2 59 aa12.77□□□□□ -0.37
CHMP1A-207ENST00000549328 G3V3Q6 166 aa12.77□□□□□ -0.37
CHMP1A-207ENST00000549328 K7EQD1 137 aa12.77□□□□□ -0.37
CHMP1A-207ENST00000549328 SRIP30626 198 aa12.77□□□□□ -0.37
CHMP1A-207ENST00000549328 SMUG1Q53HV7 270 aa12.77□□□□□ -0.37
CHMP1A-207ENST00000549328 SAPCD1Q5SSQ6 148 aa12.77□□□□□ -0.37
CHMP1A-207ENST00000549328 TMEM75Q8N9X5 138 aa12.77□□□□□ -0.37
CHMP1A-207ENST00000549328 DYNC1H1Q14204 4646 aaKnown RBP12.77□□□□□ -0.37
CHMP1A-207ENST00000549328 GCGP01275 180 aa12.76□□□□□ -0.37
CHMP1A-207ENST00000549328 PFN1P07737 140 aaKnown RBP12.76□□□□□ -0.37
CHMP1A-207ENST00000549328 ZNF80P51504 273 aaPredicted RBP12.76□□□□□ -0.37
CHMP1A-207ENST00000549328 ZNF726P1Q15940 193 aa12.76□□□□□ -0.37
CHMP1A-207ENST00000549328 ZFP69Q49AA0 526 aa12.76□□□□□ -0.37
CHMP1A-207ENST00000549328 PCNPQ8WW12 178 aaKnown RBP12.76□□□□□ -0.37
CHMP1A-207ENST00000549328 KRTAP17-1Q9BYP8 105 aa12.76□□□□□ -0.37
CHMP1A-207ENST00000549328 C16orf90A8MZG2 172 aa12.75□□□□□ -0.37
CHMP1A-207ENST00000549328 C9JCJ5 164 aa12.75□□□□□ -0.37
CHMP1A-207ENST00000549328 CIDEAO60543 219 aa12.75□□□□□ -0.37
CHMP1A-207ENST00000549328 GYPEP15421 78 aa12.75□□□□□ -0.37
CHMP1A-207ENST00000549328 PRNTQ86SH4 94 aa12.75□□□□□ -0.37
CHMP1A-207ENST00000549328 TXNDC17Q9BRA2 123 aa12.75□□□□□ -0.37
CHMP1A-207ENST00000549328 NKX6-2Q9C056 277 aaPredicted RBP12.75□□□□□ -0.37
CHMP1A-207ENST00000549328 C11orf21Q9P2W6 132 aa12.75□□□□□ -0.37
CHMP1A-207ENST00000549328 LINC00315P59091 139 aa12.74□□□□□ -0.37
CHMP1A-207ENST00000549328 ZNF876PQ49A33 203 aa12.74□□□□□ -0.37
CHMP1A-207ENST00000549328 AKR1C8PQ5T2L2 129 aa12.74□□□□□ -0.37
CHMP1A-207ENST00000549328 SH2D6Q7Z4S9 175 aa12.74□□□□□ -0.37
CHMP1A-207ENST00000549328 TRAV9-2A0A087WT02 112 aa12.73□□□□□ -0.37
CHMP1A-207ENST00000549328 K7EP13 123 aa12.73□□□□□ -0.37
CHMP1A-207ENST00000549328 ARPC5O15511 151 aa12.73□□□□□ -0.37
CHMP1A-207ENST00000549328 PTH2Q96A98 100 aa12.73□□□□□ -0.37
CHMP1A-207ENST00000549328 CYTL1Q9NRR1 136 aa12.73□□□□□ -0.37
CHMP1A-207ENST00000549328 IFNA7P01567 189 aa12.72□□□□□ -0.37
CHMP1A-207ENST00000549328 GATA1P15976 413 aaPredicted RBP12.72□□□□□ -0.37
CHMP1A-207ENST00000549328 PPT1P50897 306 aa12.72□□□□□ -0.37
CHMP1A-207ENST00000549328 Q6ZRN7 208 aaPredicted RBP12.72□□□□□ -0.37
CHMP1A-207ENST00000549328 C9orf85Q96MD7 179 aa12.72□□□□□ -0.37
CHMP1A-207ENST00000549328 SPATA12Q7Z6I5 190 aa12.71□□□□□ -0.37
CHMP1A-207ENST00000549328 HIST1H2BAQ96A08 127 aa12.71□□□□□ -0.37
CHMP1A-207ENST00000549328 LINC00479Q96M42 142 aa12.71□□□□□ -0.37
CHMP1A-207ENST00000549328 LY96Q9Y6Y9 160 aa12.71□□□□□ -0.37
CHMP1A-207ENST00000549328 TRAV34A0A0B4J273 112 aa12.7□□□□□ -0.38
CHMP1A-207ENST00000549328 FAM74A7A6NL05 159 aa12.7□□□□□ -0.38
CHMP1A-207ENST00000549328 RS1O15537 224 aa12.7□□□□□ -0.38
CHMP1A-207ENST00000549328 CDK2AP2O75956 126 aa12.7□□□□□ -0.38
CHMP1A-207ENST00000549328 TIRAPP58753 221 aa12.7□□□□□ -0.38
CHMP1A-207ENST00000549328 UBE2G2P60604 165 aa12.7□□□□□ -0.38
CHMP1A-207ENST00000549328 CFAP126Q5VTH2 177 aa12.7□□□□□ -0.38
CHMP1A-207ENST00000549328 ARL2-SNX15V9GYD0 113 aa12.7□□□□□ -0.38
CHMP1A-207ENST00000549328 FABP5P3A8MUU1 101 aa12.69□□□□□ -0.38
CHMP1A-207ENST00000549328 PEX7O00628 323 aa12.69□□□□□ -0.38
CHMP1A-207ENST00000549328 RNASE3P12724 160 aaKnown RBP12.69□□□□□ -0.38
CHMP1A-207ENST00000549328 FGF8P55075 233 aaPredicted RBP12.69□□□□□ -0.38
CHMP1A-207ENST00000549328 NFE4Q86UQ8 179 aa12.69□□□□□ -0.38
CHMP1A-207ENST00000549328 TRBV6-4A0A1B0GX49 114 aa12.68□□□□□ -0.38
CHMP1A-207ENST00000549328 MAP1LC3B2A6NCE7 125 aa12.68□□□□□ -0.38
CHMP1A-207ENST00000549328 DNAH10OSP0CZ25 163 aa12.68□□□□□ -0.38
CHMP1A-207ENST00000549328 EVI2AP22794 236 aa12.68□□□□□ -0.38
CHMP1A-207ENST00000549328 ZNF345Q14585 488 aa12.68□□□□□ -0.38
CHMP1A-207ENST00000549328 PIK3CD-AS1Q5SR53 167 aa12.68□□□□□ -0.38
CHMP1A-207ENST00000549328 DPPA3Q6W0C5 159 aa12.68□□□□□ -0.38
CHMP1A-207ENST00000549328 SLC25A29Q8N8R3 303 aa12.68□□□□□ -0.38
CHMP1A-207ENST00000549328 STOML3Q8TAV4 291 aa12.68□□□□□ -0.38
CHMP1A-207ENST00000549328 MAP1LC3BQ9GZQ8 125 aa12.68□□□□□ -0.38
CHMP1A-207ENST00000549328 IGKV3D-20A0A0C4DH25 116 aa12.67□□□□□ -0.38
CHMP1A-207ENST00000549328 LOC100131303A0A0U1RQF7 123 aa12.67□□□□□ -0.38
CHMP1A-207ENST00000549328 PGPEP1LA6NFU8 196 aa12.67□□□□□ -0.38
CHMP1A-207ENST00000549328 FHITP49789 147 aa12.67□□□□□ -0.38
CHMP1A-207ENST00000549328 ZNF506Q5JVG8 444 aa12.67□□□□□ -0.38
CHMP1A-207ENST00000549328 COX8CQ7Z4L0 72 aa12.67□□□□□ -0.38
CHMP1A-207ENST00000549328 WFDC10BQ8IUB3 73 aa12.67□□□□□ -0.38
CHMP1A-207ENST00000549328 KCNRGQ8N5I3 272 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms