RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 HIST1H2BAQ96A08 127 aa9.38□□□□□ -0.91
CDX2-202ENST00000548877 FXYD5Q96DB9 178 aa9.38□□□□□ -0.91
CDX2-202ENST00000548877 C20orf173Q96LM9 149 aa9.38□□□□□ -0.91
CDX2-202ENST00000548877 PGPEP1Q9NXJ5 209 aa9.38□□□□□ -0.91
CDX2-202ENST00000548877 FLG2Q5D862 2391 aaPredicted RBP9.37□□□□□ -0.91
CDX2-202ENST00000548877 TRAV5A0A0B4J249 113 aa9.37□□□□□ -0.91
CDX2-202ENST00000548877 SCO2A0A1W2PP80 73 aa9.37□□□□□ -0.91
CDX2-202ENST00000548877 INSP01308 110 aa9.37□□□□□ -0.91
CDX2-202ENST00000548877 PRM2P04554 102 aa9.37□□□□□ -0.91
CDX2-202ENST00000548877 ADIRFQ15847 76 aa9.37□□□□□ -0.91
CDX2-202ENST00000548877 CBLN2Q8IUK8 224 aa9.37□□□□□ -0.91
CDX2-202ENST00000548877 ANAPC16Q96DE5 110 aa9.37□□□□□ -0.91
CDX2-202ENST00000548877 C17orf77Q96MU5 243 aa9.37□□□□□ -0.91
CDX2-202ENST00000548877 PYYP10082 97 aa9.36□□□□□ -0.91
CDX2-202ENST00000548877 RPL7P18124 248 aaKnown RBP9.36□□□□□ -0.91
CDX2-202ENST00000548877 AZU1P20160 251 aa9.36□□□□□ -0.91
CDX2-202ENST00000548877 CNN1P51911 297 aaKnown RBP9.36□□□□□ -0.91
CDX2-202ENST00000548877 TAS2R60P59551 318 aa9.36□□□□□ -0.91
CDX2-202ENST00000548877 SUMO1P63165 101 aaKnown RBP9.36□□□□□ -0.91
CDX2-202ENST00000548877 PDE6HQ13956 83 aa9.36□□□□□ -0.91
CDX2-202ENST00000548877 Q5VSD8 79 aa9.36□□□□□ -0.91
CDX2-202ENST00000548877 MORN5Q5VZ52 161 aa9.36□□□□□ -0.91
CDX2-202ENST00000548877 Q6ZRN7 208 aaPredicted RBP9.36□□□□□ -0.91
CDX2-202ENST00000548877 BTF3L4Q96K17 158 aa9.36□□□□□ -0.91
CDX2-202ENST00000548877 GPR82Q96P67 336 aa9.36□□□□□ -0.91
CDX2-202ENST00000548877 OTORQ9NRC9 128 aa9.36□□□□□ -0.91
CDX2-202ENST00000548877 SRRM2Q9UQ35 2752 aaKnown RBP9.35□□□□□ -0.91
CDX2-202ENST00000548877 ZNF98A6NK75 572 aa9.35□□□□□ -0.91
CDX2-202ENST00000548877 GGTLC3B5MD39 225 aa9.35□□□□□ -0.91
CDX2-202ENST00000548877 DUSP14O95147 198 aaKnown RBP9.35□□□□□ -0.91
CDX2-202ENST00000548877 AKR1C3P42330 323 aa9.35□□□□□ -0.91
CDX2-202ENST00000548877 RPL23P62829 140 aaKnown RBP9.35□□□□□ -0.91
CDX2-202ENST00000548877 CDPF1Q6NVV7 123 aa9.35□□□□□ -0.91
CDX2-202ENST00000548877 OR8I2Q8N0Y5 310 aa9.35□□□□□ -0.91
CDX2-202ENST00000548877 C5orf17Q8NAS9 161 aa9.35□□□□□ -0.91
CDX2-202ENST00000548877 H3BNG1 76 aa9.34□□□□□ -0.91
CDX2-202ENST00000548877 H7BYZ3 331 aa9.34□□□□□ -0.91
CDX2-202ENST00000548877 PEX7O00628 323 aa9.34□□□□□ -0.91
CDX2-202ENST00000548877 S100PP25815 95 aa9.34□□□□□ -0.91
CDX2-202ENST00000548877 RPL35P42766 123 aaKnown RBP9.34□□□□□ -0.91
CDX2-202ENST00000548877 GNG4P50150 75 aa9.34□□□□□ -0.91
CDX2-202ENST00000548877 SPINK13Q1W4C9 94 aa9.34□□□□□ -0.91
CDX2-202ENST00000548877 LINC01551Q86U37 167 aa9.34□□□□□ -0.91
CDX2-202ENST00000548877 TMEM256Q8N2U0 113 aa9.34□□□□□ -0.91
CDX2-202ENST00000548877 ARL6IP6Q8N6S5 226 aa9.34□□□□□ -0.91
CDX2-202ENST00000548877 FRZBQ92765 325 aa9.34□□□□□ -0.91
CDX2-202ENST00000548877 SMIM12Q96EX1 92 aa9.34□□□□□ -0.91
CDX2-202ENST00000548877 C16orf92Q96LL3 132 aa9.34□□□□□ -0.91
CDX2-202ENST00000548877 BIN3Q9NQY0 253 aa9.34□□□□□ -0.91
CDX2-202ENST00000548877 TMA7Q9Y2S6 64 aaKnown RBP9.34□□□□□ -0.91
CDX2-202ENST00000548877 MRPS16Q9Y3D3 137 aaKnown RBP9.34□□□□□ -0.91
CDX2-202ENST00000548877 K7EQM0 130 aa9.33□□□□□ -0.92
CDX2-202ENST00000548877 M0R2Z0 102 aa9.33□□□□□ -0.92
CDX2-202ENST00000548877 ZNF253O75346 499 aa9.33□□□□□ -0.92
CDX2-202ENST00000548877 SLC25A5P05141 298 aaKnown RBP9.33□□□□□ -0.92
CDX2-202ENST00000548877 RANP62826 216 aaKnown RBP9.33□□□□□ -0.92
CDX2-202ENST00000548877 ESRGQ1W209 222 aa9.33□□□□□ -0.92
CDX2-202ENST00000548877 LINC00612Q8N6U2 182 aa9.33□□□□□ -0.92
CDX2-202ENST00000548877 CMTM2Q8TAZ6 248 aa9.33□□□□□ -0.92
CDX2-202ENST00000548877 BLNKQ8WV28 456 aa9.33□□□□□ -0.92
CDX2-202ENST00000548877 C16orf74Q96GX8 76 aa9.33□□□□□ -0.92
CDX2-202ENST00000548877 EPDR1Q9UM22 224 aa9.33□□□□□ -0.92
CDX2-202ENST00000548877 TIMM8BQ9Y5J9 83 aaPredicted RBP9.33□□□□□ -0.92
CDX2-202ENST00000548877 TRBV19A0A075B6N1 114 aa9.32□□□□□ -0.92
CDX2-202ENST00000548877 SERTM2A0A1B0GWG4 89 aa9.32□□□□□ -0.92
CDX2-202ENST00000548877 PGPA6NDG6 321 aa9.32□□□□□ -0.92
CDX2-202ENST00000548877 COLCA2A8K830 154 aa9.32□□□□□ -0.92
CDX2-202ENST00000548877 IGLC2P0DOY2 106 aa9.32□□□□□ -0.92
CDX2-202ENST00000548877 GALR1P47211 349 aa9.32□□□□□ -0.92
CDX2-202ENST00000548877 KCNIP4Q6PIL6 250 aa9.32□□□□□ -0.92
CDX2-202ENST00000548877 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.32□□□□□ -0.92
CDX2-202ENST00000548877 ZNF493Q6ZR52 646 aa9.32□□□□□ -0.92
CDX2-202ENST00000548877 ISOC2Q96AB3 205 aa9.32□□□□□ -0.92
CDX2-202ENST00000548877 IMMP2LQ96T52 175 aa9.32□□□□□ -0.92
CDX2-202ENST00000548877 AAMDCQ9H7C9 122 aa9.32□□□□□ -0.92
CDX2-202ENST00000548877 ZNF586Q9NXT0 402 aa9.32□□□□□ -0.92
CDX2-202ENST00000548877 TRAV26-1A0A087WT03 109 aa9.31□□□□□ -0.92
CDX2-202ENST00000548877 FBLL1A6NHQ2 334 aaKnown RBP9.31□□□□□ -0.92
CDX2-202ENST00000548877 LINC00315P59091 139 aa9.31□□□□□ -0.92
CDX2-202ENST00000548877 UBE2G1P62253 170 aa9.31□□□□□ -0.92
CDX2-202ENST00000548877 RPL19P84098 196 aaKnown RBP9.31□□□□□ -0.92
CDX2-202ENST00000548877 CENPWQ5EE01 88 aa9.31□□□□□ -0.92
CDX2-202ENST00000548877 OR10J6PQ8NGY7 276 aa9.31□□□□□ -0.92
CDX2-202ENST00000548877 RNASE8Q8TDE3 154 aaKnown RBP9.31□□□□□ -0.92
CDX2-202ENST00000548877 SFRP2Q96HF1 295 aa9.31□□□□□ -0.92
CDX2-202ENST00000548877 FMC1Q96HJ9 113 aa9.31□□□□□ -0.92
CDX2-202ENST00000548877 DERL1Q9BUN8 251 aa9.31□□□□□ -0.92
CDX2-202ENST00000548877 TRAV8-2A0A0B4J237 113 aa9.3□□□□□ -0.92
CDX2-202ENST00000548877 CSN1S1P47710 185 aa9.3□□□□□ -0.92
CDX2-202ENST00000548877 TMEM183BQ1AE95 376 aa9.3□□□□□ -0.92
CDX2-202ENST00000548877 C18orf15Q96N68 181 aa9.3□□□□□ -0.92
CDX2-202ENST00000548877 LINC01587Q99440 93 aa9.3□□□□□ -0.92
CDX2-202ENST00000548877 KLF12Q9Y4X4 402 aa9.3□□□□□ -0.92
CDX2-202ENST00000548877 TRBV24-1A0A075B6N3 115 aa9.29□□□□□ -0.92
CDX2-202ENST00000548877 TRAV12-2A0A075B6T6 113 aa9.29□□□□□ -0.92
CDX2-202ENST00000548877 TRAV9-1A0A075B6T8 112 aa9.29□□□□□ -0.92
CDX2-202ENST00000548877 A0A087X0K7 114 aa9.29□□□□□ -0.92
CDX2-202ENST00000548877 TRBV6-1A0A0K0K1D8 114 aa9.29□□□□□ -0.92
CDX2-202ENST00000548877 MRPS12O15235 138 aaKnown RBP9.29□□□□□ -0.92
CDX2-202ENST00000548877 RAB5AP20339 215 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms