RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 NHLRC2Q8NBF2 726 aa5.31□□□□□ -1.56
CHPT1-203ENST00000546873 OR4B1Q8NGF8 309 aa5.31□□□□□ -1.56
CHPT1-203ENST00000546873 MYOZ3Q8TDC0 251 aa5.31□□□□□ -1.56
CHPT1-203ENST00000546873 C4orf3Q8WVX3 66 aa5.31□□□□□ -1.56
CHPT1-203ENST00000546873 YPEL4Q96NS1 127 aa5.31□□□□□ -1.56
CHPT1-203ENST00000546873 ZNF331Q9NQX6 463 aaPredicted RBP5.31□□□□□ -1.56
CHPT1-203ENST00000546873 IGHV3OR16-13A0A075B7E8 117 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 IGHV3-49A0A0A0MS15 119 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 IGHV3-74A0A0B4J1X5 117 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 XKRY2A2RUG3 117 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 RBAKDNA6NC62 111 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 M0R3E3 92 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 UBE2CO00762 179 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 ID1P41134 155 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 OR5I1Q13606 314 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 TMEM78Q5T7P6 136 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 WDR73Q6P4I2 378 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 UNQ9165/PRO28630Q6UXU0 137 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 ZNF738Q8NE65 137 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 KLHL30-AS1Q8NEE0 82 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 BORCS7Q96B45 105 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 LINC00479Q96M42 142 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 C17orf77Q96MU5 243 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 RHPN1-AS1Q9BWJ2 59 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 RNASE7Q9H1E1 156 aaKnown RBP5.3□□□□□ -1.56
CHPT1-203ENST00000546873 RPP21Q9H633 154 aaKnown RBP5.3□□□□□ -1.56
CHPT1-203ENST00000546873 SRD5A3Q9H8P0 318 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 NRN1Q9NPD7 142 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 PSG8Q9UQ74 426 aa5.3□□□□□ -1.56
CHPT1-203ENST00000546873 A0A087WW49 117 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 IGKV2-40A0A087WW87 121 aaPredicted RBP5.29□□□□□ -1.56
CHPT1-203ENST00000546873 TRAV8-1A0A0A6YYK1 113 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 A8MWL6 223 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 LINC01619G3V211 115 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 LGALS9O00182 355 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 IGKV2D-40P01614 121 aaPredicted RBP5.29□□□□□ -1.56
CHPT1-203ENST00000546873 IGLV2-8P01709 118 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 MT-ND6P03923 174 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 TYMSP04818 313 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 PFN1P07737 140 aaKnown RBP5.29□□□□□ -1.56
CHPT1-203ENST00000546873 CXCL1P09341 107 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 Q6AWC8 147 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 OR10J6PQ8NGY7 276 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 SGK494Q96LW2 274 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 SAV1Q9H4B6 383 aaPredicted RBP5.29□□□□□ -1.56
CHPT1-203ENST00000546873 NAT8BQ9UHF3 227 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 SMPXQ9UHP9 88 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 V9GYV3 84 aa5.29□□□□□ -1.56
CHPT1-203ENST00000546873 EPPK1P58107 5090 aaKnown RBP5.29□□□□□ -1.56
CHPT1-203ENST00000546873 OVOL1O14753 267 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 NDUFA7O95182 113 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 APOHP02749 345 aaPredicted RBP5.28□□□□□ -1.56
CHPT1-203ENST00000546873 S100A8P05109 93 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 CDX1P47902 265 aaPredicted RBP5.28□□□□□ -1.56
CHPT1-203ENST00000546873 SYNJ2BPP57105 145 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 RPS20P60866 119 aaKnown RBP5.28□□□□□ -1.56
CHPT1-203ENST00000546873 SNRPD3P62318 126 aaKnown RBP5.28□□□□□ -1.56
CHPT1-203ENST00000546873 PAFAH1B2P68402 229 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 SMUG1Q53HV7 270 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 FAM162BQ5T6X4 162 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 LCN12Q6JVE5 192 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 RASL11AQ6T310 242 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 C10orf99Q6UWK7 81 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 TCF24Q7RTU0 167 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 ATP5L2Q7Z4Y8 100 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 ZFP82Q8N141 532 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 DYNLRB2Q8TF09 96 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 TSKUQ8WUA8 353 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 FRZBQ92765 325 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 PYGO2Q9BRQ0 406 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 GFRA4Q9GZZ7 299 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 C16orf95Q9H693 158 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 ESM1Q9NQ30 184 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 SMAD5-AS1Q9Y6J3 95 aa5.28□□□□□ -1.56
CHPT1-203ENST00000546873 SMIM27A0A1W2PRY6 76 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 TMEM213A2RRL7 107 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 FAM231BA6NCW3 169 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 IZUMO1RA6ND01 250 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 HLA-DQA1P01909 254 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 ZNF138P52744 262 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 TCL1AP56279 114 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 RAB4BP61018 213 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 ACTL10Q5JWF8 245 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 SMIM29Q86T20 159 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 RNF182Q8N6D2 247 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 OR2D3Q8NGH3 330 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 OR1N2Q8NGR9 330 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 ZC2HC1AQ96GY0 325 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 DUX3Q96PT4 197 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 LENEPQ9Y5L5 61 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 TSSC4Q9Y5U2 329 aaPredicted RBP5.27□□□□□ -1.57
CHPT1-203ENST00000546873 CMYA5Q8N3K9 4069 aa5.27□□□□□ -1.57
CHPT1-203ENST00000546873 C19orf71A6NCJ1 209 aa5.26□□□□□ -1.57
CHPT1-203ENST00000546873 C2orf70A6NJV1 201 aa5.26□□□□□ -1.57
CHPT1-203ENST00000546873 HIGD1CA8MV81 97 aa5.26□□□□□ -1.57
CHPT1-203ENST00000546873 SNURFLB1AK76 121 aa5.26□□□□□ -1.57
CHPT1-203ENST00000546873 TRGC2P03986 189 aa5.26□□□□□ -1.57
CHPT1-203ENST00000546873 RBPMS2Q6ZRY4 209 aaKnown RBP5.26□□□□□ -1.57
CHPT1-203ENST00000546873 OR11H1Q8NG94 326 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms