RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 PLAC8L1A1L4L8 177 aa9.84□□□□□ -0.83
PTCH1-213ENST00000546820 ORM1P02763 201 aa9.84□□□□□ -0.83
PTCH1-213ENST00000546820 ZNF674Q2M3X9 581 aa9.84□□□□□ -0.83
PTCH1-213ENST00000546820 C12orf74Q32Q52 190 aa9.84□□□□□ -0.83
PTCH1-213ENST00000546820 CENPWQ5EE01 88 aa9.84□□□□□ -0.83
PTCH1-213ENST00000546820 SPXQ9BT56 116 aa9.84□□□□□ -0.83
PTCH1-213ENST00000546820 MLST8Q9BVC4 326 aa9.84□□□□□ -0.83
PTCH1-213ENST00000546820 TP53TG3Q9ULZ0 132 aa9.84□□□□□ -0.83
PTCH1-213ENST00000546820 CELA1Q9UNI1 258 aa9.84□□□□□ -0.83
PTCH1-213ENST00000546820 RAB19A4D1S5 217 aa9.83□□□□□ -0.84
PTCH1-213ENST00000546820 GNRH2O43555 120 aa9.83□□□□□ -0.84
PTCH1-213ENST00000546820 DEFB130BP0DP73 79 aa9.83□□□□□ -0.84
PTCH1-213ENST00000546820 DEFB130AP0DP74 79 aa9.83□□□□□ -0.84
PTCH1-213ENST00000546820 CRIP1P50238 77 aa9.83□□□□□ -0.84
PTCH1-213ENST00000546820 CEBPGP53567 150 aa9.83□□□□□ -0.84
PTCH1-213ENST00000546820 TCL1AP56279 114 aa9.83□□□□□ -0.84
PTCH1-213ENST00000546820 NHLRC2Q8NBF2 726 aa9.83□□□□□ -0.84
PTCH1-213ENST00000546820 C11orf72Q8NBR9 251 aa9.83□□□□□ -0.84
PTCH1-213ENST00000546820 PHLDA1Q8WV24 401 aaPredicted RBP9.83□□□□□ -0.84
PTCH1-213ENST00000546820 DAZAP1Q96EP5 407 aaKnown RBP9.83□□□□□ -0.84
PTCH1-213ENST00000546820 TRAV10A0A0B4J240 114 aa9.82□□□□□ -0.84
PTCH1-213ENST00000546820 NUPR2A6NF83 97 aa9.82□□□□□ -0.84
PTCH1-213ENST00000546820 B4DEV8 164 aa9.82□□□□□ -0.84
PTCH1-213ENST00000546820 SH2D1AO60880 128 aa9.82□□□□□ -0.84
PTCH1-213ENST00000546820 MGST1P10620 155 aaKnown RBP9.82□□□□□ -0.84
PTCH1-213ENST00000546820 IFITM2Q01629 132 aa9.82□□□□□ -0.84
PTCH1-213ENST00000546820 LGALS9BQ3B8N2 356 aa9.82□□□□□ -0.84
PTCH1-213ENST00000546820 CLLU1Q5K131 121 aa9.82□□□□□ -0.84
PTCH1-213ENST00000546820 ZFAND6Q6FIF0 208 aa9.82□□□□□ -0.84
PTCH1-213ENST00000546820 PARLQ9H300 379 aa9.82□□□□□ -0.84
PTCH1-213ENST00000546820 MDFICQ9P1T7 246 aa9.82□□□□□ -0.84
PTCH1-213ENST00000546820 KLK5Q9Y337 293 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-213ENST00000546820 C9JCJ5 164 aa9.81□□□□□ -0.84
PTCH1-213ENST00000546820 TYMSP04818 313 aa9.81□□□□□ -0.84
PTCH1-213ENST00000546820 SRP19P09132 144 aaKnown RBP9.81□□□□□ -0.84
PTCH1-213ENST00000546820 S100A4P26447 101 aaKnown RBP9.81□□□□□ -0.84
PTCH1-213ENST00000546820 PRR27Q6MZM9 219 aa9.81□□□□□ -0.84
PTCH1-213ENST00000546820 CEMP1Q6PRD7 247 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-213ENST00000546820 Q6ZTC4 211 aa9.81□□□□□ -0.84
PTCH1-213ENST00000546820 C11orf21Q9P2W6 132 aa9.81□□□□□ -0.84
PTCH1-213ENST00000546820 TRGV1A0A0A0MS02 117 aa9.8□□□□□ -0.84
PTCH1-213ENST00000546820 IGKV3D-20A0A0C4DH25 116 aa9.8□□□□□ -0.84
PTCH1-213ENST00000546820 IGHV3-16A0A0C4DH30 117 aa9.8□□□□□ -0.84
PTCH1-213ENST00000546820 GAGE12BA1L429 117 aa9.8□□□□□ -0.84
PTCH1-213ENST00000546820 KRBOX1C9JBD0 128 aa9.8□□□□□ -0.84
PTCH1-213ENST00000546820 SPINK4O60575 86 aa9.8□□□□□ -0.84
PTCH1-213ENST00000546820 GAGE7O76087 117 aa9.8□□□□□ -0.84
PTCH1-213ENST00000546820 GAGE12FP0CL80 117 aa9.8□□□□□ -0.84
PTCH1-213ENST00000546820 GAGE12GP0CL81 117 aa9.8□□□□□ -0.84
PTCH1-213ENST00000546820 GAGE12IP0CL82 117 aa9.8□□□□□ -0.84
PTCH1-213ENST00000546820 ASIPP42127 132 aa9.8□□□□□ -0.84
PTCH1-213ENST00000546820 OR5I1Q13606 314 aa9.8□□□□□ -0.84
PTCH1-213ENST00000546820 FAM74A3Q4VXF1 159 aa9.8□□□□□ -0.84
PTCH1-213ENST00000546820 CASC10Q5T4H9 136 aa9.8□□□□□ -0.84
PTCH1-213ENST00000546820 TRGV2A0A075B6R0 118 aa9.79□□□□□ -0.84
PTCH1-213ENST00000546820 DEFB131BA0A096LNP1 70 aa9.79□□□□□ -0.84
PTCH1-213ENST00000546820 ZNF727A8MUV8 499 aa9.79□□□□□ -0.84
PTCH1-213ENST00000546820 M0R036 132 aa9.79□□□□□ -0.84
PTCH1-213ENST00000546820 M0R2P5 195 aa9.79□□□□□ -0.84
PTCH1-213ENST00000546820 IGLV2-8P01709 118 aa9.79□□□□□ -0.84
PTCH1-213ENST00000546820 ATP5G1P05496 136 aa9.79□□□□□ -0.84
PTCH1-213ENST00000546820 LINC01559Q495D7 138 aa9.79□□□□□ -0.84
PTCH1-213ENST00000546820 SMIM7Q9BQ49 75 aa9.79□□□□□ -0.84
PTCH1-213ENST00000546820 TRBV20OR9-2A0A075B6H5 130 aa9.78□□□□□ -0.84
PTCH1-213ENST00000546820 Q6ZTI0 123 aa9.78□□□□□ -0.84
PTCH1-213ENST00000546820 LINC00612Q8N6U2 182 aa9.78□□□□□ -0.84
PTCH1-213ENST00000546820 OCC1Q8TAD7 63 aa9.78□□□□□ -0.84
PTCH1-213ENST00000546820 LY96Q9Y6Y9 160 aa9.78□□□□□ -0.84
PTCH1-213ENST00000546820 XKRY2A2RUG3 117 aa9.77□□□□□ -0.85
PTCH1-213ENST00000546820 HTN3P15516 51 aa9.77□□□□□ -0.85
PTCH1-213ENST00000546820 RPS20P60866 119 aaKnown RBP9.77□□□□□ -0.85
PTCH1-213ENST00000546820 DNLZQ5SXM8 178 aa9.77□□□□□ -0.85
PTCH1-213ENST00000546820 RASL10AQ92737 203 aa9.77□□□□□ -0.85
PTCH1-213ENST00000546820 FAM210BQ96KR6 192 aa9.77□□□□□ -0.85
PTCH1-213ENST00000546820 TMSB15BA0A087X1C1 80 aa9.76□□□□□ -0.85
PTCH1-213ENST00000546820 GRIFINA4D1Z8 144 aa9.76□□□□□ -0.85
PTCH1-213ENST00000546820 PGPEP1LA6NFU8 196 aa9.76□□□□□ -0.85
PTCH1-213ENST00000546820 F5H768 121 aa9.76□□□□□ -0.85
PTCH1-213ENST00000546820 P01737 135 aa9.76□□□□□ -0.85
PTCH1-213ENST00000546820 SRSF3P84103 164 aaKnown RBP9.76□□□□□ -0.85
PTCH1-213ENST00000546820 TMEM241Q24JQ0 296 aa9.76□□□□□ -0.85
PTCH1-213ENST00000546820 SOHLH1Q5JUK2 328 aa9.76□□□□□ -0.85
PTCH1-213ENST00000546820 PTH2Q96A98 100 aa9.76□□□□□ -0.85
PTCH1-213ENST00000546820 C18orf15Q96N68 181 aa9.76□□□□□ -0.85
PTCH1-213ENST00000546820 MRPL16Q9NX20 251 aaKnown RBP9.76□□□□□ -0.85
PTCH1-213ENST00000546820 IL36BQ9NZH7 164 aa9.76□□□□□ -0.85
PTCH1-213ENST00000546820 C19orf71A6NCJ1 209 aa9.75□□□□□ -0.85
PTCH1-213ENST00000546820 IGLL5B9A064 214 aa9.75□□□□□ -0.85
PTCH1-213ENST00000546820 CXCL1P09341 107 aa9.75□□□□□ -0.85
PTCH1-213ENST00000546820 ARMS2P0C7Q2 107 aa9.75□□□□□ -0.85
PTCH1-213ENST00000546820 RNASE3P12724 160 aaKnown RBP9.75□□□□□ -0.85
PTCH1-213ENST00000546820 TCTAP57738 103 aa9.75□□□□□ -0.85
PTCH1-213ENST00000546820 ZNF876PQ49A33 203 aa9.75□□□□□ -0.85
PTCH1-213ENST00000546820 SYT8Q8NBV8 401 aa9.75□□□□□ -0.85
PTCH1-213ENST00000546820 C9orf85Q96MD7 179 aa9.75□□□□□ -0.85
PTCH1-213ENST00000546820 NDUFAF3Q9BU61 184 aa9.75□□□□□ -0.85
PTCH1-213ENST00000546820 PHLDA3Q9Y5J5 127 aa9.75□□□□□ -0.85
PTCH1-213ENST00000546820 C9JQL5 133 aa9.74□□□□□ -0.85
PTCH1-213ENST00000546820 PIK3CD-AS1Q5SR53 167 aa9.74□□□□□ -0.85
PTCH1-213ENST00000546820 NUDT10Q8NFP7 164 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms