RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 TRAV8-3A0A0A6YYJ7 113 aa8.33□□□□□ -1.08
SCAF11-208ENST00000546534 GNRH2O43555 120 aa8.33□□□□□ -1.08
SCAF11-208ENST00000546534 CST7O76096 145 aa8.33□□□□□ -1.08
SCAF11-208ENST00000546534 MT1HL1P0DM35 61 aa8.33□□□□□ -1.08
SCAF11-208ENST00000546534 ACOT6Q3I5F7 207 aaPredicted RBP8.33□□□□□ -1.08
SCAF11-208ENST00000546534 GCSAMLQ5JQS6 135 aa8.33□□□□□ -1.08
SCAF11-208ENST00000546534 Q6AWC8 147 aa8.33□□□□□ -1.08
SCAF11-208ENST00000546534 DEDD2Q8WXF8 326 aa8.33□□□□□ -1.08
SCAF11-208ENST00000546534 SLC25A2Q9BXI2 301 aa8.33□□□□□ -1.08
SCAF11-208ENST00000546534 C20orf85Q9H1P6 137 aa8.33□□□□□ -1.08
SCAF11-208ENST00000546534 L7N2F9 121 aa8.32□□□□□ -1.08
SCAF11-208ENST00000546534 NBEAP1P0C6P0 100 aa8.32□□□□□ -1.08
SCAF11-208ENST00000546534 BCAP31P51572 246 aa8.32□□□□□ -1.08
SCAF11-208ENST00000546534 RPL37AP61513 92 aaKnown RBP8.32□□□□□ -1.08
SCAF11-208ENST00000546534 VAMP2P63027 116 aa8.32□□□□□ -1.08
SCAF11-208ENST00000546534 BAXQ07812 192 aa8.32□□□□□ -1.08
SCAF11-208ENST00000546534 VWC2Q2TAL6 325 aa8.32□□□□□ -1.08
SCAF11-208ENST00000546534 DAZ4Q86SG3 579 aaKnown RBP8.32□□□□□ -1.08
SCAF11-208ENST00000546534 DAZAP1Q96EP5 407 aaKnown RBP8.32□□□□□ -1.08
SCAF11-208ENST00000546534 FAM167A-AS1Q96KT0 104 aa8.32□□□□□ -1.08
SCAF11-208ENST00000546534 DAZ3Q9NR90 486 aaKnown RBP8.32□□□□□ -1.08
SCAF11-208ENST00000546534 NAGKQ9UJ70 344 aa8.32□□□□□ -1.08
SCAF11-208ENST00000546534 V9GYH0 126 aa8.32□□□□□ -1.08
SCAF11-208ENST00000546534 UBE2L5PA0A1B0GUS4 154 aa8.31□□□□□ -1.08
SCAF11-208ENST00000546534 FAM24AA6NFZ4 105 aa8.31□□□□□ -1.08
SCAF11-208ENST00000546534 FBLL1A6NHQ2 334 aaKnown RBP8.31□□□□□ -1.08
SCAF11-208ENST00000546534 NDUFB6O95139 128 aa8.31□□□□□ -1.08
SCAF11-208ENST00000546534 CAV2P51636 162 aa8.31□□□□□ -1.08
SCAF11-208ENST00000546534 Q8N976 141 aa8.31□□□□□ -1.08
SCAF11-208ENST00000546534 ATP6V0E2Q8NHE4 81 aa8.31□□□□□ -1.08
SCAF11-208ENST00000546534 CHAC2Q8WUX2 184 aa8.31□□□□□ -1.08
SCAF11-208ENST00000546534 PRADC1Q9BSG0 188 aa8.31□□□□□ -1.08
SCAF11-208ENST00000546534 GTSF1LQ9H1H1 148 aa8.31□□□□□ -1.08
SCAF11-208ENST00000546534 TRBV6-4A0A1B0GX49 114 aa8.3□□□□□ -1.08
SCAF11-208ENST00000546534 RBAKDNA6NC62 111 aa8.3□□□□□ -1.08
SCAF11-208ENST00000546534 RNF222A6NCQ9 220 aa8.3□□□□□ -1.08
SCAF11-208ENST00000546534 RHOHQ15669 191 aa8.3□□□□□ -1.08
SCAF11-208ENST00000546534 MIR17HGQ75NE6 70 aa8.3□□□□□ -1.08
SCAF11-208ENST00000546534 PHYHIPLQ96FC7 376 aa8.3□□□□□ -1.08
SCAF11-208ENST00000546534 OR51M1Q9H341 326 aa8.3□□□□□ -1.08
SCAF11-208ENST00000546534 LSM5Q9Y4Y9 91 aaKnown RBP8.3□□□□□ -1.08
SCAF11-208ENST00000546534 IGHV3-73A0A0B4J1V6 119 aa8.29□□□□□ -1.08
SCAF11-208ENST00000546534 IGLV2-11P01706 119 aa8.29□□□□□ -1.08
SCAF11-208ENST00000546534 OR10J4P0C629 311 aa8.29□□□□□ -1.08
SCAF11-208ENST00000546534 C11orf1Q9H5F2 150 aa8.29□□□□□ -1.08
SCAF11-208ENST00000546534 COX11Q9Y6N1 276 aa8.29□□□□□ -1.08
SCAF11-208ENST00000546534 C5orf51A6NDU8 294 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 GGTLC3B5MD39 225 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 CCSO14618 274 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 TYMSP04818 313 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 FGF7P21781 194 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 S100A11P31949 105 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 CSN1S1P47710 185 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 TMBIM6P55061 237 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 TOR2AQ5JU69 321 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 CFAP126Q5VTH2 177 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 DPPA3Q6W0C5 159 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 MITD1Q8WV92 249 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 FXYD5Q96DB9 178 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 DNAJC30Q96LL9 226 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 PAXXQ9BUH6 204 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 MRPS26Q9BYN8 205 aaKnown RBP8.28□□□□□ -1.08
SCAF11-208ENST00000546534 LENEPQ9Y5L5 61 aa8.28□□□□□ -1.08
SCAF11-208ENST00000546534 LRP2P98164 4655 aa8.27□□□□□ -1.09
SCAF11-208ENST00000546534 SULT1A1P50225 295 aa8.27□□□□□ -1.09
SCAF11-208ENST00000546534 RANP62826 216 aaKnown RBP8.27□□□□□ -1.09
SCAF11-208ENST00000546534 ZNF876PQ49A33 203 aa8.27□□□□□ -1.09
SCAF11-208ENST00000546534 BCL7BQ9BQE9 202 aa8.27□□□□□ -1.09
SCAF11-208ENST00000546534 IGSF23A1L1A6 192 aa8.26□□□□□ -1.09
SCAF11-208ENST00000546534 DIRC3C9JPN6 131 aa8.26□□□□□ -1.09
SCAF11-208ENST00000546534 CIDEAO60543 219 aa8.26□□□□□ -1.09
SCAF11-208ENST00000546534 RMI2Q96E14 147 aa8.26□□□□□ -1.09
SCAF11-208ENST00000546534 NPCDR1Q9BY65 106 aa8.26□□□□□ -1.09
SCAF11-208ENST00000546534 IGKV2D-24A0A075B6R9 120 aa8.25□□□□□ -1.09
SCAF11-208ENST00000546534 TRAV21A0A0B4J279 112 aa8.25□□□□□ -1.09
SCAF11-208ENST00000546534 FAM25EA8MYX2 175 aa8.25□□□□□ -1.09
SCAF11-208ENST00000546534 H3BMQ9 156 aa8.25□□□□□ -1.09
SCAF11-208ENST00000546534 TMEM252Q8N6L7 170 aa8.25□□□□□ -1.09
SCAF11-208ENST00000546534 ATP5SQ99766 215 aa8.25□□□□□ -1.09
SCAF11-208ENST00000546534 SDF2L1Q9HCN8 221 aa8.25□□□□□ -1.09
SCAF11-208ENST00000546534 LYRM2Q9NU23 88 aaPredicted RBP8.25□□□□□ -1.09
SCAF11-208ENST00000546534 TRAV8-1A0A0A6YYK1 113 aa8.24□□□□□ -1.09
SCAF11-208ENST00000546534 NAP1L6A6NFF2 107 aa8.24□□□□□ -1.09
SCAF11-208ENST00000546534 F6UZH7 168 aa8.24□□□□□ -1.09
SCAF11-208ENST00000546534 MGST1P10620 155 aaKnown RBP8.24□□□□□ -1.09
SCAF11-208ENST00000546534 HBG1P69891 147 aa8.24□□□□□ -1.09
SCAF11-208ENST00000546534 HBG2P69892 147 aa8.24□□□□□ -1.09
SCAF11-208ENST00000546534 ATP6V1FQ16864 119 aa8.24□□□□□ -1.09
SCAF11-208ENST00000546534 SPANXN2Q5MJ10 180 aa8.24□□□□□ -1.09
SCAF11-208ENST00000546534 STX12Q86Y82 276 aa8.24□□□□□ -1.09
SCAF11-208ENST00000546534 THAP6Q8TBB0 222 aa8.24□□□□□ -1.09
SCAF11-208ENST00000546534 TMED6Q8WW62 240 aa8.24□□□□□ -1.09
SCAF11-208ENST00000546534 KCNS1Q96KK3 526 aa8.24□□□□□ -1.09
SCAF11-208ENST00000546534 SH3BGRL3Q9H299 93 aa8.24□□□□□ -1.09
SCAF11-208ENST00000546534 PKHD1L1Q86WI1 4243 aa8.24□□□□□ -1.09
SCAF11-208ENST00000546534 GAGE12JA6NER3 117 aa8.23□□□□□ -1.09
SCAF11-208ENST00000546534 OR7C2O60412 319 aa8.23□□□□□ -1.09
SCAF11-208ENST00000546534 PVALBP20472 110 aaPredicted RBP8.23□□□□□ -1.09
SCAF11-208ENST00000546534 BTCP35070 178 aa8.23□□□□□ -1.09
SCAF11-208ENST00000546534 ASIPP42127 132 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms