RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 A0A0G2JLM5 398 aa6.74□□□□□ -1.33
CCDC7-210ENST00000545067 IGLV2-11P01706 119 aa6.74□□□□□ -1.33
CCDC7-210ENST00000545067 COTL1Q14019 142 aa6.74□□□□□ -1.33
CCDC7-210ENST00000545067 RNASE8Q8TDE3 154 aaKnown RBP6.74□□□□□ -1.33
CCDC7-210ENST00000545067 LINC00477Q96M19 166 aa6.74□□□□□ -1.33
CCDC7-210ENST00000545067 TRAV21A0A0B4J279 112 aa6.74□□□□□ -1.33
CCDC7-210ENST00000545067 URB1-AS1Q96HZ7 61 aa6.74□□□□□ -1.33
CCDC7-210ENST00000545067 CYSLTR1Q9Y271 337 aa6.74□□□□□ -1.33
CCDC7-210ENST00000545067 K7ERJ3 54 aa6.74□□□□□ -1.33
CCDC7-210ENST00000545067 SMAD7O15105 426 aaKnown RBP6.74□□□□□ -1.33
CCDC7-210ENST00000545067 TRBV12-3P01733 135 aa6.74□□□□□ -1.33
CCDC7-210ENST00000545067 COX8AP10176 69 aa6.74□□□□□ -1.33
CCDC7-210ENST00000545067 SRSF1Q07955 248 aaKnown RBP eCLIP6.74□□□□□ -1.33
CCDC7-210ENST00000545067 LAGE3Q14657 143 aa6.74□□□□□ -1.33
CCDC7-210ENST00000545067 NPBQ8NG41 125 aa6.74□□□□□ -1.33
CCDC7-210ENST00000545067 TRAV12-2A0A075B6T6 113 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 WI2-2373I1.2A0A1W2PRP0 233 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 BUB3O43684 328 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 GAS8-AS1O95177 125 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 PRSS2P07478 247 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 MRPL35Q9NZE8 188 aaKnown RBP6.73□□□□□ -1.33
CCDC7-210ENST00000545067 IGHV4-38-2P0DP08 117 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 Q6ZQT7 251 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 RELNP78509 3460 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 TRBV7-1A0A0A6YYK4 115 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 IGHV4-61A0A0C4DH41 118 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 CENPVL3A0A0U1RRI6 287 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 K7EP13 123 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 TNFRSF13BO14836 293 aaPredicted RBP6.73□□□□□ -1.33
CCDC7-210ENST00000545067 GNRH2O43555 120 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 IGF1P05019 195 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 PSMB2P49721 201 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 MRGPRG-AS1Q2M3A8 158 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 PIP4P2Q8N4L2 257 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 KIR2DL4Q99706 377 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 CD5LO43866 347 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 HSD52Q0P140 79 aa6.73□□□□□ -1.33
CCDC7-210ENST00000545067 ANXA2RQ3ZCQ2 193 aa6.72□□□□□ -1.33
CCDC7-210ENST00000545067 LY6LH3BQJ8 138 aa6.72□□□□□ -1.33
CCDC7-210ENST00000545067 FSTL3O95633 263 aa6.72□□□□□ -1.33
CCDC7-210ENST00000545067 SEC11AP67812 179 aa6.72□□□□□ -1.33
CCDC7-210ENST00000545067 DGAT2L7PQ6IED9 249 aa6.72□□□□□ -1.33
CCDC7-210ENST00000545067 UNQ9165/PRO28630Q6UXU0 137 aa6.72□□□□□ -1.33
CCDC7-210ENST00000545067 MRPL52Q86TS9 123 aaKnown RBP6.72□□□□□ -1.33
CCDC7-210ENST00000545067 BEX4Q9NWD9 120 aaPredicted RBP6.72□□□□□ -1.33
CCDC7-210ENST00000545067 SAMD5Q5TGI4 173 aa6.72□□□□□ -1.33
CCDC7-210ENST00000545067 CSTL1Q9H114 145 aa6.72□□□□□ -1.33
CCDC7-210ENST00000545067 PRRC2AP48634 2157 aaKnown RBP6.71□□□□□ -1.33
CCDC7-210ENST00000545067 IGHV1-69DA0A0B4J2H0 117 aa6.71□□□□□ -1.33
CCDC7-210ENST00000545067 A0A1W2PRX2 142 aa6.71□□□□□ -1.33
CCDC7-210ENST00000545067 C19orf84I3L1E1 186 aa6.71□□□□□ -1.33
CCDC7-210ENST00000545067 IGHV1-69P01742 117 aa6.71□□□□□ -1.33
CCDC7-210ENST00000545067 HERVK_113P61574 105 aa6.71□□□□□ -1.33
CCDC7-210ENST00000545067 SNRPD3P62318 126 aaKnown RBP6.71□□□□□ -1.33
CCDC7-210ENST00000545067 GAGE1Q13065 139 aa6.71□□□□□ -1.33
CCDC7-210ENST00000545067 LINC01545Q5VT33 79 aa6.71□□□□□ -1.33
CCDC7-210ENST00000545067 C9orf139Q6ZV77 190 aa6.71□□□□□ -1.33
CCDC7-210ENST00000545067 ZNF418Q8TF45 676 aaPredicted RBP6.71□□□□□ -1.33
CCDC7-210ENST00000545067 CST9LQ9H4G1 147 aa6.71□□□□□ -1.33
CCDC7-210ENST00000545067 CHTOPQ9Y3Y2 248 aaKnown RBP6.71□□□□□ -1.33
CCDC7-210ENST00000545067 A0A1W2PPR1 153 aa6.71□□□□□ -1.34
CCDC7-210ENST00000545067 J3QR89 54 aa6.71□□□□□ -1.34
CCDC7-210ENST00000545067 SYNJ2BPP57105 145 aa6.71□□□□□ -1.34
CCDC7-210ENST00000545067 LY6G5BQ8NDX9 201 aa6.71□□□□□ -1.34
CCDC7-210ENST00000545067 DYNLRB2Q8TF09 96 aa6.71□□□□□ -1.34
CCDC7-210ENST00000545067 CHAC1Q9BUX1 264 aa6.71□□□□□ -1.34
CCDC7-210ENST00000545067 MRPL16Q9NX20 251 aaKnown RBP6.71□□□□□ -1.34
CCDC7-210ENST00000545067 IGKV3D-20A0A0C4DH25 116 aa6.71□□□□□ -1.34
CCDC7-210ENST00000545067 IGHV4-39P01824 125 aa6.71□□□□□ -1.34
CCDC7-210ENST00000545067 RPL39LQ96EH5 51 aaKnown RBP6.71□□□□□ -1.34
CCDC7-210ENST00000545067 SCRT2Q9NQ03 307 aa6.71□□□□□ -1.34
CCDC7-210ENST00000545067 KLK9Q9UKQ9 250 aa6.71□□□□□ -1.34
CCDC7-210ENST00000545067 ZNF815PA8K554 130 aa6.7□□□□□ -1.34
CCDC7-210ENST00000545067 SMAD5-AS1Q9Y6J3 95 aa6.7□□□□□ -1.34
CCDC7-210ENST00000545067 KNCNA6PVL3 124 aa6.7□□□□□ -1.34
CCDC7-210ENST00000545067 TAX1BP3O14907 124 aa6.7□□□□□ -1.34
CCDC7-210ENST00000545067 SPINK13Q1W4C9 94 aa6.7□□□□□ -1.34
CCDC7-210ENST00000545067 LGALS9BQ3B8N2 356 aa6.7□□□□□ -1.34
CCDC7-210ENST00000545067 LGALS9CQ6DKI2 356 aa6.7□□□□□ -1.34
CCDC7-210ENST00000545067 OR9G4Q8NGQ1 327 aa6.7□□□□□ -1.34
CCDC7-210ENST00000545067 CCDC140Q96MF4 163 aa6.7□□□□□ -1.34
CCDC7-210ENST00000545067 ASH1LQ9NR48 2969 aaKnown RBP6.69□□□□□ -1.34
CCDC7-210ENST00000545067 AMTNQ6UX39 209 aa6.69□□□□□ -1.34
CCDC7-210ENST00000545067 DEFB125Q8N687 156 aa6.69□□□□□ -1.34
CCDC7-210ENST00000545067 ANKRD17O75179 2603 aaKnown RBP6.69□□□□□ -1.34
CCDC7-210ENST00000545067 NPIPB6E9PJ23 425 aa6.69□□□□□ -1.34
CCDC7-210ENST00000545067 OVOL1O14753 267 aa6.69□□□□□ -1.34
CCDC7-210ENST00000545067 ITLN2Q8WWU7 325 aaPredicted RBP6.69□□□□□ -1.34
CCDC7-210ENST00000545067 ZNF479Q96JC4 524 aa6.69□□□□□ -1.34
CCDC7-210ENST00000545067 SIRPDQ9H106 197 aa6.69□□□□□ -1.34
CCDC7-210ENST00000545067 DPH3P1Q9H4G8 78 aa6.69□□□□□ -1.34
CCDC7-210ENST00000545067 IGHV4-30-2A0A087WSY4 118 aa6.69□□□□□ -1.34
CCDC7-210ENST00000545067 ODF3BA8MYP8 253 aa6.69□□□□□ -1.34
CCDC7-210ENST00000545067 SUMO2P61956 95 aaKnown RBP6.69□□□□□ -1.34
CCDC7-210ENST00000545067 OCIAD2Q56VL3 154 aa6.69□□□□□ -1.34
CCDC7-210ENST00000545067 C2orf66Q6UXQ4 117 aa6.69□□□□□ -1.34
CCDC7-210ENST00000545067 DUX3Q96PT4 197 aa6.69□□□□□ -1.34
CCDC7-210ENST00000545067 A0A1B0GWB2 263 aa6.68□□□□□ -1.34
CCDC7-210ENST00000545067 SAP30O75446 220 aa6.68□□□□□ -1.34
CCDC7-210ENST00000545067 COX6B1P14854 86 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms