RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 GAGE12IP0CL82 117 aa5.19□□□□□ -1.58
CPSF7-224ENST00000544990 EIF5AP63241 154 aaKnown RBP5.19□□□□□ -1.58
CPSF7-224ENST00000544990 IBA57Q5T440 356 aaKnown RBP5.19□□□□□ -1.58
CPSF7-224ENST00000544990 PRR9Q5T870 116 aa5.19□□□□□ -1.58
CPSF7-224ENST00000544990 Q6AWC8 147 aa5.19□□□□□ -1.58
CPSF7-224ENST00000544990 SUMO4Q6EEV6 95 aa5.19□□□□□ -1.58
CPSF7-224ENST00000544990 LINC00612Q8N6U2 182 aa5.19□□□□□ -1.58
CPSF7-224ENST00000544990 POM121L12Q8N7R1 296 aa5.19□□□□□ -1.58
CPSF7-224ENST00000544990 STOML3Q8TAV4 291 aa5.19□□□□□ -1.58
CPSF7-224ENST00000544990 NKX6-2Q9C056 277 aaPredicted RBP5.19□□□□□ -1.58
CPSF7-224ENST00000544990 TREM1Q9NP99 234 aa5.19□□□□□ -1.58
CPSF7-224ENST00000544990 GSN-AS1Q9NRJ2 163 aa5.19□□□□□ -1.58
CPSF7-224ENST00000544990 CYTL1Q9NRR1 136 aa5.19□□□□□ -1.58
CPSF7-224ENST00000544990 DYNC2H1Q8NCM8 4307 aaKnown RBP5.19□□□□□ -1.58
CPSF7-224ENST00000544990 TRGV2A0A075B6R0 118 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 TRGV1A0A0A0MS02 117 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 TRAV21A0A0B4J279 112 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 TCRAP04437 139 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 SEC11BP0C7V7 166 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 TCL1AP56279 114 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 GNG5P63218 68 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 ZNF415Q09FC8 603 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 OR5I1Q13606 314 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 LGALS9BQ3B8N2 356 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 RNF212Q495C1 297 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 Q6ZTI0 123 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 C11orf72Q8NBR9 251 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 OR11H4Q8NGC9 324 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 ATG101Q9BSB4 218 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 ZNF471Q9BX82 626 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-224ENST00000544990 EPDR1Q9UM22 224 aa5.18□□□□□ -1.58
CPSF7-224ENST00000544990 PLECQ15149 4684 aaKnown RBP5.17□□□□□ -1.58
CPSF7-224ENST00000544990 TRAV8-1A0A0A6YYK1 113 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 MAP1LC3B2A6NCE7 125 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 UMAD1C9J7I0 102 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 F6UZH7 168 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 BCL2L11O43521 198 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 SPINK4O60575 86 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 PFDN1O60925 122 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 NUDT3O95989 172 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 IFNA7P01567 189 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 PPT1P50897 306 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 FGF8P55075 233 aaPredicted RBP5.17□□□□□ -1.58
CPSF7-224ENST00000544990 FLI1Q01543 452 aaPredicted RBP5.17□□□□□ -1.58
CPSF7-224ENST00000544990 ZNF726P1Q15940 193 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 ZFP69Q49AA0 526 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 MUC21Q5SSG8 566 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 SAPCD1Q5SSQ6 148 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 Q6ZQT7 251 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 SSX7Q7RTT5 188 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 CYB561D1Q8N8Q1 229 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 TMEM75Q8N9X5 138 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 KCNS1Q96KK3 526 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 SGK494Q96LW2 274 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 C18orf15Q96N68 181 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 SPXQ9BT56 116 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 MAP1LC3BQ9GZQ8 125 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 TMPRSS5Q9H3S3 457 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 NAGKQ9UJ70 344 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 TP53TG3Q9ULZ0 132 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 PSG8Q9UQ74 426 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 KLF12Q9Y4X4 402 aa5.17□□□□□ -1.58
CPSF7-224ENST00000544990 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.16□□□□□ -1.58
CPSF7-224ENST00000544990 GGTLC3B5MD39 225 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 H3BNG1 76 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 TPT1P13693 172 aaKnown RBP5.16□□□□□ -1.58
CPSF7-224ENST00000544990 CCL18P55774 89 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 UBE2G2P60604 165 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 SLAQ13239 276 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 FHL2Q14192 279 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 TMEM183BQ1AE95 376 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 TDRG1Q3Y452 100 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 SMUG1Q53HV7 270 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 DPPA3Q6W0C5 159 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 TMUB2Q71RG4 321 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 PRNTQ86SH4 94 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 TMEM183AQ8IXX5 376 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 HIST1H2BAQ96A08 127 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 TVP23CQ96ET8 276 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 SDF2L1Q9HCN8 221 aa5.16□□□□□ -1.58
CPSF7-224ENST00000544990 SACSQ9NZJ4 4579 aa5.15□□□□□ -1.58
CPSF7-224ENST00000544990 ALMS1Q8TCU4 4167 aa5.15□□□□□ -1.58
CPSF7-224ENST00000544990 TRAV26-1A0A087WT03 109 aa5.15□□□□□ -1.59
CPSF7-224ENST00000544990 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.59
CPSF7-224ENST00000544990 FAM74A7A6NL05 159 aa5.15□□□□□ -1.59
CPSF7-224ENST00000544990 PRYO14603 147 aa5.15□□□□□ -1.59
CPSF7-224ENST00000544990 GCGP01275 180 aa5.15□□□□□ -1.59
CPSF7-224ENST00000544990 FHITP49789 147 aa5.15□□□□□ -1.59
CPSF7-224ENST00000544990 LGALSLQ3ZCW2 172 aaPredicted RBP5.15□□□□□ -1.59
CPSF7-224ENST00000544990 CST9LP1Q5W188 147 aa5.15□□□□□ -1.59
CPSF7-224ENST00000544990 EIF5AL1Q6IS14 154 aaKnown RBP5.15□□□□□ -1.59
CPSF7-224ENST00000544990 TCTE3Q8IZS6 198 aa5.15□□□□□ -1.59
CPSF7-224ENST00000544990 FAM213BQ8TBF2 198 aa5.15□□□□□ -1.59
CPSF7-224ENST00000544990 SFT2D1Q8WV19 159 aa5.15□□□□□ -1.59
CPSF7-224ENST00000544990 TCEAL7Q9BRU2 100 aa5.15□□□□□ -1.59
CPSF7-224ENST00000544990 MRPL16Q9NX20 251 aaKnown RBP5.15□□□□□ -1.59
CPSF7-224ENST00000544990 MDFICQ9P1T7 246 aa5.15□□□□□ -1.59
CPSF7-224ENST00000544990 ARL2-SNX15V9GYD0 113 aa5.15□□□□□ -1.59
CPSF7-224ENST00000544990 RYR2Q92736 4967 aa5.15□□□□□ -1.59
CPSF7-224ENST00000544990 NACAE9PAV3 2078 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms