RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 XKRY2A2RUG3 117 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 C19orf71A6NCJ1 209 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 RBMY1BA6NDE4 496 aaKnown RBP4.83□□□□□ -1.64
CDCA3-209ENST00000544610 RBMY1EA6NEQ0 496 aaKnown RBP4.83□□□□□ -1.64
CDCA3-209ENST00000544610 FABP5P3A8MUU1 101 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 KLLNB2CW77 178 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 OR11H12B2RN74 326 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 H3BMM0 161 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 CD7P09564 240 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 RBMY1DP0C7P1 496 aaKnown RBP4.83□□□□□ -1.64
CDCA3-209ENST00000544610 LEPP41159 167 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 RPS20P60866 119 aaKnown RBP4.83□□□□□ -1.64
CDCA3-209ENST00000544610 NUTF2P61970 127 aaKnown RBP4.83□□□□□ -1.64
CDCA3-209ENST00000544610 GNG5P63218 68 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 RPL19P84098 196 aaKnown RBP4.83□□□□□ -1.64
CDCA3-209ENST00000544610 HIST1H1AQ02539 215 aaPredicted RBP4.83□□□□□ -1.64
CDCA3-209ENST00000544610 ZNF674Q2M3X9 581 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 PSMG4Q5JS54 123 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 FAM162BQ5T6X4 162 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 Q6AWC8 147 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 LINC00476Q8WZB0 136 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 SFRP2Q96HF1 295 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 C20orf173Q96LM9 149 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 GFRA4Q9GZZ7 299 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 AGPAT4-IT1Q9H0P7 198 aa4.83□□□□□ -1.64
CDCA3-209ENST00000544610 VPS13DQ5THJ4 4388 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 IGKV2-40A0A087WW87 121 aaPredicted RBP4.82□□□□□ -1.64
CDCA3-209ENST00000544610 TRAV21A0A0B4J279 112 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 KIR2DL5BA0A0G2JN68 375 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 KIR2DL5BA0A0G2JPC4 375 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 C7orf77A4D0Y5 90 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 ZNF705FA8MVS1 300 aaPredicted RBP4.82□□□□□ -1.64
CDCA3-209ENST00000544610 H3BTX0 84 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 M0R036 132 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 IGKV2D-40P01614 121 aaPredicted RBP4.82□□□□□ -1.64
CDCA3-209ENST00000544610 PLA2G1BP04054 148 aaKnown RBP4.82□□□□□ -1.64
CDCA3-209ENST00000544610 PFN1P07737 140 aaKnown RBP4.82□□□□□ -1.64
CDCA3-209ENST00000544610 ZNF688P0C7X2 276 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 EDN2P20800 178 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 CDKN1BP46527 198 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 CEBPGP53567 150 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 FOXA3P55318 350 aaPredicted RBP4.82□□□□□ -1.64
CDCA3-209ENST00000544610 ADIRFQ15847 76 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 GUCA2BQ16661 112 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 RNF151Q2KHN1 245 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 ODF3L2Q3SX64 289 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 TDRG1Q3Y452 100 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 DNLZQ5SXM8 178 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 MORN3Q6PF18 240 aaPredicted RBP4.82□□□□□ -1.64
CDCA3-209ENST00000544610 PRNTQ86SH4 94 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 KIR2DL5AQ8N109 375 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 GBGT1Q8N5D6 347 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 DEFB125Q8N687 156 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 RNF182Q8N6D2 247 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 ZFAND2AQ8N6M9 145 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 KIR2DL5BQ8NHK3 375 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 DAZAP1Q96EP5 407 aaKnown RBP4.82□□□□□ -1.64
CDCA3-209ENST00000544610 LINC00479Q96M42 142 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 VGLL1Q99990 258 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 LINC00467Q9BRT7 94 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 C1QTNF4Q9BXJ3 329 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 WFDC10AQ9H1F0 79 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 SRD5A3Q9H8P0 318 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 MAP6D1Q9H9H5 199 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 SMCO4Q9NRQ5 59 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 TP53TG3Q9ULZ0 132 aa4.82□□□□□ -1.64
CDCA3-209ENST00000544610 KIAA1109Q2LD37 5005 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 TRAV8-1A0A0A6YYK1 113 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 TRAV34A0A0B4J273 112 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 A0A1W2PPQ1 181 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 A8MWL6 223 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 PRAC2D3DTV9 90 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 H7BYZ3 331 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 K7EN84 100 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 P01737 135 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 SNRPCP09234 159 aaKnown RBP4.81□□□□□ -1.64
CDCA3-209ENST00000544610 MED14OSP0DP75 135 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 HLA-DMBP28068 263 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 DEFB131AP59861 70 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 ERVFC1-1P60608 527 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 COX19Q49B96 90 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 IBA57Q5T440 356 aaKnown RBP4.81□□□□□ -1.64
CDCA3-209ENST00000544610 WDR73Q6P4I2 378 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 RASL11AQ6T310 242 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 AMTNQ6UX39 209 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 TMEM256Q8N2U0 113 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 OR10G8Q8NGN5 311 aa4.81□□□□□ -1.64
CDCA3-209ENST00000544610 IGKV3-7A0A075B6H7 116 aa4.8□□□□□ -1.64
CDCA3-209ENST00000544610 TRBV24-1A0A075B6N3 115 aa4.8□□□□□ -1.64
CDCA3-209ENST00000544610 A0A1B0GW15 77 aa4.8□□□□□ -1.64
CDCA3-209ENST00000544610 F2Z2F3 143 aa4.8□□□□□ -1.64
CDCA3-209ENST00000544610 GCSHP23434 173 aa4.8□□□□□ -1.64
CDCA3-209ENST00000544610 S100PP25815 95 aa4.8□□□□□ -1.64
CDCA3-209ENST00000544610 RNF212Q495C1 297 aa4.8□□□□□ -1.64
CDCA3-209ENST00000544610 PIK3CD-AS1Q5SR53 167 aa4.8□□□□□ -1.64
CDCA3-209ENST00000544610 KCNIP4Q6PIL6 250 aa4.8□□□□□ -1.64
CDCA3-209ENST00000544610 ATP5L2Q7Z4Y8 100 aa4.8□□□□□ -1.64
CDCA3-209ENST00000544610 TRPT1Q86TN4 253 aaKnown RBP4.8□□□□□ -1.64
CDCA3-209ENST00000544610 STHQ8IWL8 128 aa4.8□□□□□ -1.64
CDCA3-209ENST00000544610 FAM24BQ8N5W8 94 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms