RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 IGHV3-30-3P0DP02 117 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 IGHV3-30-5P0DP03 117 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 RALGAPA1Q6GYQ0 2036 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 HIGD2BQ4VC39 106 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 SH2D6Q7Z4S9 175 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 Q8TCH9 128 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 IGKV4-1P06312 121 aa8.22□□□□□ -1.09
PCDH9-204ENST00000544246 ELANEP08246 267 aa8.22□□□□□ -1.09
PCDH9-204ENST00000544246 MST1P26927 711 aa8.22□□□□□ -1.09
PCDH9-204ENST00000544246 FNDC1Q4ZHG4 1894 aaPredicted RBP8.22□□□□□ -1.09
PCDH9-204ENST00000544246 AHCTF1Q8WYP5 2266 aa8.22□□□□□ -1.09
PCDH9-204ENST00000544246 MTCL1Q9Y4B5 1905 aaKnown RBP8.22□□□□□ -1.09
PCDH9-204ENST00000544246 DEFB125Q8N687 156 aa8.22□□□□□ -1.09
PCDH9-204ENST00000544246 ARID2Q68CP9 1835 aa8.22□□□□□ -1.09
PCDH9-204ENST00000544246 TMEM61Q8N0U2 210 aa8.22□□□□□ -1.09
PCDH9-204ENST00000544246 H3BUA1 57 aa8.22□□□□□ -1.09
PCDH9-204ENST00000544246 GNRH2O43555 120 aa8.22□□□□□ -1.09
PCDH9-204ENST00000544246 RNF183Q96D59 192 aa8.22□□□□□ -1.09
PCDH9-204ENST00000544246 C16orf74Q96GX8 76 aa8.22□□□□□ -1.09
PCDH9-204ENST00000544246 MRPL23Q16540 153 aaKnown RBP8.22□□□□□ -1.09
PCDH9-204ENST00000544246 JMJD7-PLA2G4BH0Y9G9 81 aa8.21□□□□□ -1.09
PCDH9-204ENST00000544246 TANC1Q9C0D5 1861 aa8.21□□□□□ -1.09
PCDH9-204ENST00000544246 RNF144BQ7Z419 303 aa8.21□□□□□ -1.09
PCDH9-204ENST00000544246 SVILO95425 2214 aa8.21□□□□□ -1.09
PCDH9-204ENST00000544246 IGLC1P0CG04 106 aa8.21□□□□□ -1.1
PCDH9-204ENST00000544246 GYPEP15421 78 aa8.21□□□□□ -1.1
PCDH9-204ENST00000544246 FANCD2OSQ96PS1 177 aa8.21□□□□□ -1.1
PCDH9-204ENST00000544246 TRBV12-3P01733 135 aa8.21□□□□□ -1.1
PCDH9-204ENST00000544246 NDUFA1O15239 70 aa8.2□□□□□ -1.1
PCDH9-204ENST00000544246 IGHV2-70P01814 119 aa8.2□□□□□ -1.1
PCDH9-204ENST00000544246 Q71RC1 249 aaPredicted RBP8.2□□□□□ -1.1
PCDH9-204ENST00000544246 FXYD5Q96DB9 178 aa8.2□□□□□ -1.1
PCDH9-204ENST00000544246 GVINP1Q7Z2Y8 2422 aa8.2□□□□□ -1.1
PCDH9-204ENST00000544246 Q6ZVH6 145 aa8.2□□□□□ -1.1
PCDH9-204ENST00000544246 ATP6V0E2Q8NHE4 81 aa8.2□□□□□ -1.1
PCDH9-204ENST00000544246 IGLV10-54A0A075B6I4 117 aa8.2□□□□□ -1.1
PCDH9-204ENST00000544246 RBAKDNA6NC62 111 aa8.2□□□□□ -1.1
PCDH9-204ENST00000544246 ZNF726P1Q15940 193 aa8.2□□□□□ -1.1
PCDH9-204ENST00000544246 F8W735 103 aaPredicted RBP8.19□□□□□ -1.1
PCDH9-204ENST00000544246 DAZ2Q13117 558 aaKnown RBP8.19□□□□□ -1.1
PCDH9-204ENST00000544246 FOXL2NBQ6ZUU3 175 aa8.19□□□□□ -1.1
PCDH9-204ENST00000544246 DAZ4Q86SG3 579 aaKnown RBP8.19□□□□□ -1.1
PCDH9-204ENST00000544246 DAZ3Q9NR90 486 aaKnown RBP8.19□□□□□ -1.1
PCDH9-204ENST00000544246 PIKFYVEQ9Y2I7 2098 aa8.19□□□□□ -1.1
PCDH9-204ENST00000544246 FAM120AOSQ5T036 256 aa8.19□□□□□ -1.1
PCDH9-204ENST00000544246 C9orf66Q5T8R8 295 aa8.19□□□□□ -1.1
PCDH9-204ENST00000544246 B9D2Q9BPU9 175 aa8.19□□□□□ -1.1
PCDH9-204ENST00000544246 B3GALT5-AS1P59052 145 aa8.19□□□□□ -1.1
PCDH9-204ENST00000544246 SEM1Q6ZVN7 128 aa8.19□□□□□ -1.1
PCDH9-204ENST00000544246 C17orf58Q2M2W7 97 aa8.19□□□□□ -1.1
PCDH9-204ENST00000544246 ATP5G1P05496 136 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 CRYGBP07316 175 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 LINC00311Q8N616 119 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 DIRC1Q969H9 104 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 ZNF747Q9BV97 191 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 KLF2Q9Y5W3 355 aaPredicted RBP8.18□□□□□ -1.1
PCDH9-204ENST00000544246 TTC28Q96AY4 2481 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 ARTNQ5T4W7 220 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 PCP2Q8IVA1 136 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 NPBQ8NG41 125 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 CACNA1HO95180 2353 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 FRMPD3Q5JV73 1810 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 TEX22C9J3V5 150 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 SPART-AS1P0CW21 52 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 RNF152Q8N8N0 203 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 SIP14410 1827 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 Q6ZS92 163 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 TM2D2Q9BX73 214 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 LCTP09848 1927 aa8.18□□□□□ -1.1
PCDH9-204ENST00000544246 IGKV1-6A0A0C4DH72 117 aa8.17□□□□□ -1.1
PCDH9-204ENST00000544246 ASPHD1Q5U4P2 390 aa8.17□□□□□ -1.1
PCDH9-204ENST00000544246 PIFOQ8TCI5 191 aa8.17□□□□□ -1.1
PCDH9-204ENST00000544246 LMO1P25800 156 aa8.17□□□□□ -1.1
PCDH9-204ENST00000544246 CCL24O00175 119 aa8.17□□□□□ -1.1
PCDH9-204ENST00000544246 PLA2G2CQ5R387 149 aa8.17□□□□□ -1.1
PCDH9-204ENST00000544246 TPSG1Q9NRR2 321 aa8.17□□□□□ -1.1
PCDH9-204ENST00000544246 PRR15LQ9BU68 103 aa8.17□□□□□ -1.1
PCDH9-204ENST00000544246 FAM110AQ9BQ89 295 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 PI4KAP42356 2102 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 SEC16AO15027 2179 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 CXCL5P42830 114 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 PRR20EP86478 221 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 PRR20CP86479 221 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 PRR20DP86480 221 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 PRR20BP86481 221 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 PRR20AP86496 221 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 RALGAPA2Q2PPJ7 1873 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 A4D1N5 150 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 LGALS9O00182 355 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 WT1-ASQ06250 92 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 DOCK8Q8NF50 2099 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 TMEM256-PLSCR3K7ERE1 68 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 LECT2O14960 151 aa8.16□□□□□ -1.1
PCDH9-204ENST00000544246 LOXP28300 417 aaPredicted RBP8.16□□□□□ -1.1
PCDH9-204ENST00000544246 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.15□□□□□ -1.1
PCDH9-204ENST00000544246 TEN1Q86WV5 123 aa8.15□□□□□ -1.1
PCDH9-204ENST00000544246 IGHV4OR15-8A0A075B7B6 117 aa8.15□□□□□ -1.1
PCDH9-204ENST00000544246 A0A087WW49 117 aa8.15□□□□□ -1.1
PCDH9-204ENST00000544246 LENEPQ9Y5L5 61 aa8.15□□□□□ -1.1
PCDH9-204ENST00000544246 APRG1Q8IVJ8 170 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms