RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 AKR1C8PQ5T2L2 129 aa9.86□□□□□ -0.83
VPS37B-204ENST00000543590 C6orf223Q8N319 242 aa9.86□□□□□ -0.83
VPS37B-204ENST00000543590 C8orf49Q96NF6 230 aa9.86□□□□□ -0.83
VPS37B-204ENST00000543590 HHLA3Q9XRX5 114 aa9.86□□□□□ -0.83
VPS37B-204ENST00000543590 ICOSQ9Y6W8 199 aa9.86□□□□□ -0.83
VPS37B-204ENST00000543590 TYMSP04818 313 aa9.85□□□□□ -0.83
VPS37B-204ENST00000543590 SFTA3P0C7M3 94 aa9.85□□□□□ -0.83
VPS37B-204ENST00000543590 ZNF80P51504 273 aaPredicted RBP9.85□□□□□ -0.83
VPS37B-204ENST00000543590 FLI1Q01543 452 aaPredicted RBP9.85□□□□□ -0.83
VPS37B-204ENST00000543590 CYB561D1Q8N8Q1 229 aa9.85□□□□□ -0.83
VPS37B-204ENST00000543590 ZNF479Q96JC4 524 aa9.85□□□□□ -0.83
VPS37B-204ENST00000543590 KCNS1Q96KK3 526 aa9.85□□□□□ -0.83
VPS37B-204ENST00000543590 SDF2L1Q9HCN8 221 aa9.85□□□□□ -0.83
VPS37B-204ENST00000543590 TRGV4A0A0C4DH28 118 aa9.85□□□□□ -0.83
VPS37B-204ENST00000543590 M0R2P5 195 aa9.85□□□□□ -0.83
VPS37B-204ENST00000543590 PRNTQ86SH4 94 aa9.85□□□□□ -0.83
VPS37B-204ENST00000543590 TMEM75Q8N9X5 138 aa9.85□□□□□ -0.83
VPS37B-204ENST00000543590 FBLL1A6NHQ2 334 aaKnown RBP9.84□□□□□ -0.83
VPS37B-204ENST00000543590 GCGP01275 180 aa9.84□□□□□ -0.83
VPS37B-204ENST00000543590 FGF8P55075 233 aaPredicted RBP9.84□□□□□ -0.83
VPS37B-204ENST00000543590 TTC32Q5I0X7 151 aa9.84□□□□□ -0.83
VPS37B-204ENST00000543590 KRTAP1-5Q9BYS1 174 aa9.84□□□□□ -0.83
VPS37B-204ENST00000543590 C11orf21Q9P2W6 132 aa9.84□□□□□ -0.83
VPS37B-204ENST00000543590 TRAV4A0A0B4J268 109 aa9.83□□□□□ -0.84
VPS37B-204ENST00000543590 IFNA7P01567 189 aa9.83□□□□□ -0.84
VPS37B-204ENST00000543590 UBE2G2P60604 165 aa9.83□□□□□ -0.84
VPS37B-204ENST00000543590 TNP2Q05952 138 aa9.83□□□□□ -0.84
VPS37B-204ENST00000543590 MRPL23Q16540 153 aaKnown RBP9.83□□□□□ -0.84
VPS37B-204ENST00000543590 ZFP69Q49AA0 526 aa9.83□□□□□ -0.84
VPS37B-204ENST00000543590 SMUG1Q53HV7 270 aa9.83□□□□□ -0.84
VPS37B-204ENST00000543590 SAPCD1Q5SSQ6 148 aa9.83□□□□□ -0.84
VPS37B-204ENST00000543590 KCNRGQ8N5I3 272 aa9.83□□□□□ -0.84
VPS37B-204ENST00000543590 LINC00479Q96M42 142 aa9.83□□□□□ -0.84
VPS37B-204ENST00000543590 TRAV34A0A0B4J273 112 aa9.82□□□□□ -0.84
VPS37B-204ENST00000543590 FAM74A7A6NL05 159 aa9.82□□□□□ -0.84
VPS37B-204ENST00000543590 PFN1P07737 140 aaKnown RBP9.82□□□□□ -0.84
VPS37B-204ENST00000543590 OR4C5Q8NGB2 326 aa9.82□□□□□ -0.84
VPS37B-204ENST00000543590 A0A1W2PPQ1 181 aa9.81□□□□□ -0.84
VPS37B-204ENST00000543590 MAP1LC3B2A6NCE7 125 aa9.81□□□□□ -0.84
VPS37B-204ENST00000543590 ZNF345Q14585 488 aa9.81□□□□□ -0.84
VPS37B-204ENST00000543590 NEGR1Q7Z3B1 354 aa9.81□□□□□ -0.84
VPS37B-204ENST00000543590 OR11H4Q8NGC9 324 aa9.81□□□□□ -0.84
VPS37B-204ENST00000543590 NKX6-2Q9C056 277 aaPredicted RBP9.81□□□□□ -0.84
VPS37B-204ENST00000543590 MAP1LC3BQ9GZQ8 125 aa9.81□□□□□ -0.84
VPS37B-204ENST00000543590 HECTD4Q9Y4D8 3996 aa9.81□□□□□ -0.84
VPS37B-204ENST00000543590 HMSDA8MTL9 139 aa9.8□□□□□ -0.84
VPS37B-204ENST00000543590 PEX7O00628 323 aa9.8□□□□□ -0.84
VPS37B-204ENST00000543590 PPT1P50897 306 aa9.8□□□□□ -0.84
VPS37B-204ENST00000543590 LYPD5Q6UWN5 251 aa9.8□□□□□ -0.84
VPS37B-204ENST00000543590 ARL2-SNX15V9GYD0 113 aa9.8□□□□□ -0.84
VPS37B-204ENST00000543590 FAT2Q9NYQ8 4349 aa9.8□□□□□ -0.84
VPS37B-204ENST00000543590 DNAH2Q9P225 4427 aa9.8□□□□□ -0.84
VPS37B-204ENST00000543590 C9JCJ5 164 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 K7EQD1 137 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 SIVA1O15304 175 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 NXPH4O95158 308 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 ORM1P02763 201 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 GYPEP15421 78 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 FHITP49789 147 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 ZNF876PQ49A33 203 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 HIST1H2BAQ96A08 127 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 C9orf85Q96MD7 179 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 FAM210AQ96ND0 272 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 A0A0D9SG52 128 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 SEC11BP0C7V7 166 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 SRIP30626 198 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 Q86TA4 180 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 STOML3Q8TAV4 291 aa9.79□□□□□ -0.84
VPS37B-204ENST00000543590 PCNPQ8WW12 178 aaKnown RBP9.79□□□□□ -0.84
VPS37B-204ENST00000543590 DNAH17Q9UFH2 4485 aa9.78□□□□□ -0.84
VPS37B-204ENST00000543590 FABP5P3A8MUU1 101 aa9.78□□□□□ -0.84
VPS37B-204ENST00000543590 ZNF575Q86XF7 245 aa9.78□□□□□ -0.84
VPS37B-204ENST00000543590 IGKV3D-20A0A0C4DH25 116 aa9.77□□□□□ -0.85
VPS37B-204ENST00000543590 PGPEP1LA6NFU8 196 aa9.77□□□□□ -0.85
VPS37B-204ENST00000543590 RS1O15537 224 aa9.77□□□□□ -0.85
VPS37B-204ENST00000543590 BCL2L11O43521 198 aa9.77□□□□□ -0.85
VPS37B-204ENST00000543590 MED14OSP0DP75 135 aa9.77□□□□□ -0.85
VPS37B-204ENST00000543590 RNASE3P12724 160 aaKnown RBP9.77□□□□□ -0.85
VPS37B-204ENST00000543590 GATA1P15976 413 aaPredicted RBP9.77□□□□□ -0.85
VPS37B-204ENST00000543590 BTF3P20290 206 aaKnown RBP9.77□□□□□ -0.85
VPS37B-204ENST00000543590 CST9LP1Q5W188 147 aa9.77□□□□□ -0.85
VPS37B-204ENST00000543590 DPPA3Q6W0C5 159 aa9.77□□□□□ -0.85
VPS37B-204ENST00000543590 ZNF471Q9BX82 626 aaPredicted RBP9.77□□□□□ -0.85
VPS37B-204ENST00000543590 LOC100131303A0A0U1RQF7 123 aa9.76□□□□□ -0.85
VPS37B-204ENST00000543590 KANTRA0A1W2PQU2 76 aa9.76□□□□□ -0.85
VPS37B-204ENST00000543590 UMAD1C9J7I0 102 aa9.76□□□□□ -0.85
VPS37B-204ENST00000543590 ZNF506Q5JVG8 444 aa9.76□□□□□ -0.85
VPS37B-204ENST00000543590 CFAP126Q5VTH2 177 aa9.76□□□□□ -0.85
VPS37B-204ENST00000543590 FAM213BQ8TBF2 198 aa9.76□□□□□ -0.85
VPS37B-204ENST00000543590 MBD3L1Q8WWY6 194 aa9.76□□□□□ -0.85
VPS37B-204ENST00000543590 PTH2Q96A98 100 aa9.76□□□□□ -0.85
VPS37B-204ENST00000543590 TXNDC17Q9BRA2 123 aa9.76□□□□□ -0.85
VPS37B-204ENST00000543590 ZFP30Q9Y2G7 519 aa9.76□□□□□ -0.85
VPS37B-204ENST00000543590 CIDEAO60543 219 aa9.75□□□□□ -0.85
VPS37B-204ENST00000543590 PAGE4O60829 102 aa9.75□□□□□ -0.85
VPS37B-204ENST00000543590 CRIP1P50238 77 aa9.75□□□□□ -0.85
VPS37B-204ENST00000543590 LINC00315P59091 139 aa9.75□□□□□ -0.85
VPS37B-204ENST00000543590 SFT2D1Q8WV19 159 aa9.75□□□□□ -0.85
VPS37B-204ENST00000543590 FMC1Q96HJ9 113 aa9.75□□□□□ -0.85
VPS37B-204ENST00000543590 TCEAL7Q9BRU2 100 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms