RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SCRT2Q9NQ03 307 aa10.32□□□□□ -0.76
TNC-212ENST00000542877 CRLF1O75462 422 aa10.32□□□□□ -0.76
TNC-212ENST00000542877 RPL32P62910 135 aaKnown RBP10.32□□□□□ -0.76
TNC-212ENST00000542877 FOXI2Q6ZQN5 318 aa10.32□□□□□ -0.76
TNC-212ENST00000542877 RIF1Q5UIP0 2472 aaKnown RBP10.32□□□□□ -0.76
TNC-212ENST00000542877 SP5Q6BEB4 398 aaPredicted RBP10.31□□□□□ -0.76
TNC-212ENST00000542877 WDR81Q562E7 1941 aa10.31□□□□□ -0.76
TNC-212ENST00000542877 TICRRQ7Z2Z1 1910 aa10.31□□□□□ -0.76
TNC-212ENST00000542877 DEFB121Q5J5C9 76 aa10.31□□□□□ -0.76
TNC-212ENST00000542877 PCP2Q8IVA1 136 aa10.31□□□□□ -0.76
TNC-212ENST00000542877 CACNA1BQ00975 2339 aa10.31□□□□□ -0.76
TNC-212ENST00000542877 SHISA9B4DS77 424 aa10.31□□□□□ -0.76
TNC-212ENST00000542877 ANKRD29Q8N6D5 301 aa10.31□□□□□ -0.76
TNC-212ENST00000542877 NTN5Q8WTR8 489 aaPredicted RBP10.31□□□□□ -0.76
TNC-212ENST00000542877 RNF138Q8WVD3 245 aa10.31□□□□□ -0.76
TNC-212ENST00000542877 LYPD6Q86Y78 171 aa10.31□□□□□ -0.76
TNC-212ENST00000542877 TMEM126AQ9H061 195 aa10.31□□□□□ -0.76
TNC-212ENST00000542877 DSCR8Q96T75 97 aa10.3□□□□□ -0.76
TNC-212ENST00000542877 CCL25O15444 150 aa10.3□□□□□ -0.76
TNC-212ENST00000542877 GP9P14770 177 aa10.3□□□□□ -0.76
TNC-212ENST00000542877 TRACP01848 142 aa10.3□□□□□ -0.76
TNC-212ENST00000542877 LINC01545Q5VT33 79 aa10.3□□□□□ -0.76
TNC-212ENST00000542877 FGF23Q9GZV9 251 aaPredicted RBP10.3□□□□□ -0.76
TNC-212ENST00000542877 CTSZQ9UBR2 303 aa10.3□□□□□ -0.76
TNC-212ENST00000542877 GNRH2O43555 120 aa10.3□□□□□ -0.76
TNC-212ENST00000542877 LHBP01229 141 aa10.3□□□□□ -0.76
TNC-212ENST00000542877 FOXE3Q13461 319 aa10.3□□□□□ -0.76
TNC-212ENST00000542877 PLA2G2CQ5R387 149 aa10.3□□□□□ -0.76
TNC-212ENST00000542877 C22orf46C9J442 243 aa10.29□□□□□ -0.76
TNC-212ENST00000542877 PLA2G2EQ9NZK7 142 aa10.29□□□□□ -0.76
TNC-212ENST00000542877 SPANXCQ9NY87 97 aa10.29□□□□□ -0.76
TNC-212ENST00000542877 C15orf53Q8NAA6 179 aa10.29□□□□□ -0.76
TNC-212ENST00000542877 IGF2BP2-AS1Q96M15 143 aa10.29□□□□□ -0.76
TNC-212ENST00000542877 HOXB4P17483 251 aaPredicted RBP10.28□□□□□ -0.76
TNC-212ENST00000542877 APOC4P55056 127 aa10.28□□□□□ -0.76
TNC-212ENST00000542877 CR1LQ2VPA4 569 aa10.28□□□□□ -0.76
TNC-212ENST00000542877 PLXND1Q9Y4D7 1925 aa10.28□□□□□ -0.76
TNC-212ENST00000542877 PRSS47A8MTI9 375 aa10.28□□□□□ -0.76
TNC-212ENST00000542877 I3L2K1 104 aa10.28□□□□□ -0.76
TNC-212ENST00000542877 NUPR1O60356 82 aa10.28□□□□□ -0.76
TNC-212ENST00000542877 GPR179Q6PRD1 2367 aa10.27□□□□□ -0.76
TNC-212ENST00000542877 CREBBPQ92793 2442 aa10.27□□□□□ -0.77
TNC-212ENST00000542877 SUMO4Q6EEV6 95 aa10.27□□□□□ -0.77
TNC-212ENST00000542877 NPBQ8NG41 125 aa10.27□□□□□ -0.77
TNC-212ENST00000542877 IGLL5B9A064 214 aa10.27□□□□□ -0.77
TNC-212ENST00000542877 F6UB75 175 aa10.27□□□□□ -0.77
TNC-212ENST00000542877 HERV-K104P63124 156 aa10.27□□□□□ -0.77
TNC-212ENST00000542877 RNASE13Q5GAN3 156 aaKnown RBP10.27□□□□□ -0.77
TNC-212ENST00000542877 MAPK1IP1LQ8NDC0 245 aa10.27□□□□□ -0.77
TNC-212ENST00000542877 CACNA1HO95180 2353 aa10.27□□□□□ -0.77
TNC-212ENST00000542877 Q6ZVH6 145 aa10.26□□□□□ -0.77
TNC-212ENST00000542877 ABCA4P78363 2273 aa10.26□□□□□ -0.77
TNC-212ENST00000542877 TRAV25A0A0B4J276 109 aa10.26□□□□□ -0.77
TNC-212ENST00000542877 ACYP1P07311 99 aa10.26□□□□□ -0.77
TNC-212ENST00000542877 PATE2Q6UY27 113 aa10.26□□□□□ -0.77
TNC-212ENST00000542877 GATA1P15976 413 aaPredicted RBP10.26□□□□□ -0.77
TNC-212ENST00000542877 Q96MF0 132 aa10.26□□□□□ -0.77
TNC-212ENST00000542877 K7EIM0 57 aa10.26□□□□□ -0.77
TNC-212ENST00000542877 Q9H8V8 135 aa10.26□□□□□ -0.77
TNC-212ENST00000542877 CRYBA4P53673 196 aa10.25□□□□□ -0.77
TNC-212ENST00000542877 SLC25A29Q8N8R3 303 aa10.25□□□□□ -0.77
TNC-212ENST00000542877 ANAPC1Q9H1A4 1944 aa10.25□□□□□ -0.77
TNC-212ENST00000542877 HOXD3P31249 432 aaPredicted RBP10.25□□□□□ -0.77
TNC-212ENST00000542877 IGKV1-17P01599 117 aa10.25□□□□□ -0.77
TNC-212ENST00000542877 ANGP03950 147 aaKnown RBP10.25□□□□□ -0.77
TNC-212ENST00000542877 ANKRD39Q53RE8 183 aa10.25□□□□□ -0.77
TNC-212ENST00000542877 BAALC-AS2P0C853 105 aa10.25□□□□□ -0.77
TNC-212ENST00000542877 NOTCH3Q9UM47 2321 aa10.24□□□□□ -0.77
TNC-212ENST00000542877 CENPVL3A0A0U1RRI6 287 aa10.24□□□□□ -0.77
TNC-212ENST00000542877 TINCRA0A1B0GVN0 87 aa10.24□□□□□ -0.77
TNC-212ENST00000542877 U3KQE9 123 aa10.24□□□□□ -0.77
TNC-212ENST00000542877 IGLV11-55A0A075B6I3 123 aa10.24□□□□□ -0.77
TNC-212ENST00000542877 C3orf56Q8N813 242 aa10.24□□□□□ -0.77
TNC-212ENST00000542877 MGAMO43451 1857 aa10.24□□□□□ -0.77
TNC-212ENST00000542877 RMI2Q96E14 147 aa10.24□□□□□ -0.77
TNC-212ENST00000542877 LINC00173Q6ZV60 143 aa10.24□□□□□ -0.77
TNC-212ENST00000542877 ORMDL1Q9P0S3 153 aa10.23□□□□□ -0.77
TNC-212ENST00000542877 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.23□□□□□ -0.77
TNC-212ENST00000542877 IGKV2-29A2NJV5 120 aaPredicted RBP10.23□□□□□ -0.77
TNC-212ENST00000542877 J3QKU1 62 aa10.23□□□□□ -0.77
TNC-212ENST00000542877 FAM167A-AS1Q96KT0 104 aa10.23□□□□□ -0.77
TNC-212ENST00000542877 TDRG1Q3Y452 100 aa10.23□□□□□ -0.77
TNC-212ENST00000542877 HIGD1BQ9P298 99 aa10.23□□□□□ -0.77
TNC-212ENST00000542877 IGFBPL1Q8WX77 278 aa10.23□□□□□ -0.77
TNC-212ENST00000542877 IGHV7-81A0A0B4J1V7 117 aa10.23□□□□□ -0.77
TNC-212ENST00000542877 TRAV12-1A0A0B4J245 112 aa10.23□□□□□ -0.77
TNC-212ENST00000542877 TEX48A0A1B0GUV7 120 aa10.23□□□□□ -0.77
TNC-212ENST00000542877 RNF152Q8N8N0 203 aa10.23□□□□□ -0.77
TNC-212ENST00000542877 PRSS33Q8NF86 280 aa10.22□□□□□ -0.77
TNC-212ENST00000542877 RPL39LQ96EH5 51 aaKnown RBP10.22□□□□□ -0.77
TNC-212ENST00000542877 NBASA2RRP1 2371 aa10.22□□□□□ -0.77
TNC-212ENST00000542877 MALRD1Q5VYJ5 2156 aa10.22□□□□□ -0.77
TNC-212ENST00000542877 SPRNQ5BIV9 151 aa10.22□□□□□ -0.77
TNC-212ENST00000542877 CTSGP08311 255 aa10.22□□□□□ -0.77
TNC-212ENST00000542877 ZFP2Q6ZN57 461 aa10.22□□□□□ -0.77
TNC-212ENST00000542877 VPREB3Q9UKI3 123 aa10.22□□□□□ -0.77
TNC-212ENST00000542877 IGFL2Q6UWQ7 119 aa10.22□□□□□ -0.77
TNC-212ENST00000542877 KMT2EQ8IZD2 1858 aa10.21□□□□□ -0.77
TNC-212ENST00000542877 CRYGCP07315 174 aa10.21□□□□□ -0.77
TNC-212ENST00000542877 NOP10Q9NPE3 64 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms