RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 GPR84Q9NQS5 396 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 CKLFQ9UBR5 152 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 TP53TG3Q9ULZ0 132 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 MED31Q9Y3C7 131 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 PXMP4Q9Y6I8 212 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 PCNX2A6NKB5 2137 aa2.53□□□□□ -2.01
SFSWAP-211ENST00000542813 ABCA7Q8IZY2 2146 aa2.53□□□□□ -2.01
SFSWAP-211ENST00000542813 HIVEP3Q5T1R4 2406 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 TRAV9-1A0A075B6T8 112 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 A0A1B0GX51 115 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 DPRXA6NFQ7 191 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 TMEM212A6NML5 194 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 F8W1H4 67 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 H7C1C5 153 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 HMGB3O15347 200 aaKnown RBP2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 NDUFB2O95178 105 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 GPX1P07203 203 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 SPINK8P0C7L1 97 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 HIST1H1DP16402 221 aaKnown RBP2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 CNTFRP26992 372 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 OPRM1P35372 400 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 ZNF133P52736 654 aaPredicted RBP2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 ZNF117Q03924 483 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 KLRD1Q13241 179 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 OR8B8Q15620 311 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 IGFBP7Q16270 282 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 GLYATL3Q5SZD4 288 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 FAM104BQ5XKR9 115 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 ZFAND6Q6FIF0 208 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 Q6ZS92 163 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 Q8N7P7 452 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 SIGLECL1Q8N7X8 197 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 OR10P1Q8NGE3 313 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 OR4A5Q8NH83 315 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 OR13C6PQ8NH95 151 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 CLDND2Q8NHS1 167 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 VSTM2AQ8TAG5 236 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 C18orf32Q8TCD1 76 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 AP1S3Q96PC3 154 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 SPIN2AQ99865 258 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 RNF5Q99942 180 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 SPIN2BQ9BPZ2 258 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 PMCHL2Q9BQD1 86 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 MANBALQ9NQG1 85 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 AK3Q9UIJ7 227 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 WASHC3Q9Y3C0 194 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 LINC00312Q9Y6C7 94 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 CELSR2Q9HCU4 2923 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 PCDH15Q96QU1 1955 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 TMEM131Q92545 1883 aa2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 GOLGA4Q13439 2230 aaKnown RBP2.52□□□□□ -2.01
SFSWAP-211ENST00000542813 JMJD1CQ15652 2540 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 NIPBLQ6KC79 2804 aaeCLIP2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 BSNQ9UPA5 3926 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 IGKV1D-42A0A075B6H8 117 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 DUXBA0A1W2PPF3 345 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 C7orf71A4D174 169 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 IZUMO1RA6ND01 250 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 FAM24AA6NFZ4 105 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 M0R2Z0 102 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 RER1O15258 196 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 KRASP01116 189 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 LTAP01374 205 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 TTRP02766 147 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 PRH1P02810 166 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 ORM2P19652 201 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 NTF3P20783 257 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 SRIP30626 198 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 CA7P43166 264 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 SSR2P43308 183 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 SLC48A1Q6P1K1 146 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 EBLN2Q6P2I7 272 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 C22orf39Q6P5X5 142 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 LCN15Q6UWW0 184 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 CYP2G1PQ6ZSU1 146 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 SGPP2Q8IWX5 399 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 DEFB119Q8N690 84 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 MIR7-3HGQ8N6C7 128 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 ZFP62Q8NB50 900 aaPredicted RBP2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 OR10AG1Q8NH19 301 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 ITLN2Q8WWU7 325 aaPredicted RBP2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 GPX7Q96SL4 187 aaPredicted RBP2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 COMMD5Q9GZQ3 224 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 FAM60AQ9NP50 221 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 PRR34Q9NV39 138 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 TRAPPC1Q9Y5R8 145 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 CHD3Q12873 2000 aaKnown RBP2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 ICE1Q9Y2F5 2266 aa2.51□□□□□ -2.01
SFSWAP-211ENST00000542813 AKAP9Q99996 3911 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 TRAV36DV7A0A075B6V5 113 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 TRAV8-1A0A0A6YYK1 113 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 IGHV3-43A0A0B4J1X8 118 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 MUC21A0A0G2JKD1 596 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 MUC21A0A140T8X8 626 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 LOC107986453A0A1B0GWG9 222 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 A0A1W2PPM0 123 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 TMEM14DPA8MWL7 114 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 F2Z2F3 143 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 J3KT08 172 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms