RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 SMKR1H3BMG3 65 aa10.61□□□□□ -0.71
LDB3-207ENST00000542786 CRXO43186 299 aaPredicted RBP10.61□□□□□ -0.71
LDB3-207ENST00000542786 CD5LO43866 347 aa10.61□□□□□ -0.71
LDB3-207ENST00000542786 GAS8-AS1O95177 125 aa10.61□□□□□ -0.71
LDB3-207ENST00000542786 BTF3P20290 206 aaKnown RBP10.61□□□□□ -0.71
LDB3-207ENST00000542786 Q6ZSV7 163 aa10.61□□□□□ -0.71
LDB3-207ENST00000542786 UNC79Q9P2D8 2635 aa10.61□□□□□ -0.71
LDB3-207ENST00000542786 IFI27P40305 119 aaPredicted RBP10.6□□□□□ -0.71
LDB3-207ENST00000542786 DEFA6Q01524 100 aa10.6□□□□□ -0.71
LDB3-207ENST00000542786 C4orf3Q8WVX3 66 aa10.6□□□□□ -0.71
LDB3-207ENST00000542786 VAMP8Q9BV40 100 aa10.6□□□□□ -0.71
LDB3-207ENST00000542786 SCRT2Q9NQ03 307 aa10.6□□□□□ -0.71
LDB3-207ENST00000542786 AP5S1Q9NUS5 200 aa10.6□□□□□ -0.71
LDB3-207ENST00000542786 LINC01546A6NGU7 62 aa10.59□□□□□ -0.71
LDB3-207ENST00000542786 NCR2O95944 276 aa10.59□□□□□ -0.71
LDB3-207ENST00000542786 DEFB136Q30KP8 78 aa10.59□□□□□ -0.71
LDB3-207ENST00000542786 ODF3Q96PU9 254 aa10.59□□□□□ -0.71
LDB3-207ENST00000542786 ZNF469Q96JG9 3925 aaPredicted RBP10.59□□□□□ -0.71
LDB3-207ENST00000542786 H3BVH4 76 aa10.59□□□□□ -0.71
LDB3-207ENST00000542786 J3KRW8 73 aa10.59□□□□□ -0.71
LDB3-207ENST00000542786 PPBPP02775 128 aa10.59□□□□□ -0.71
LDB3-207ENST00000542786 MED14OSP0DP75 135 aa10.59□□□□□ -0.71
LDB3-207ENST00000542786 RNASE4P34096 147 aaKnown RBP10.59□□□□□ -0.71
LDB3-207ENST00000542786 SLURP1P55000 103 aa10.59□□□□□ -0.71
LDB3-207ENST00000542786 CACNG7P62955 275 aa10.59□□□□□ -0.71
LDB3-207ENST00000542786 ANXA2RQ3ZCQ2 193 aa10.59□□□□□ -0.71
LDB3-207ENST00000542786 WFDC3Q8IUB2 231 aa10.59□□□□□ -0.71
LDB3-207ENST00000542786 SONP18583 2426 aaKnown RBP10.59□□□□□ -0.71
LDB3-207ENST00000542786 A0A0J9YX75 114 aa10.58□□□□□ -0.72
LDB3-207ENST00000542786 SYS1-DBNDD2H3BUS1 97 aa10.58□□□□□ -0.72
LDB3-207ENST00000542786 LEPROTL1O95214 131 aa10.58□□□□□ -0.72
LDB3-207ENST00000542786 ZNF688P0C7X2 276 aa10.58□□□□□ -0.72
LDB3-207ENST00000542786 CKS2P33552 79 aa10.58□□□□□ -0.72
LDB3-207ENST00000542786 FA2HQ7L5A8 372 aa10.58□□□□□ -0.72
LDB3-207ENST00000542786 TMEM70Q9BUB7 260 aa10.58□□□□□ -0.72
LDB3-207ENST00000542786 PAM16Q9Y3D7 125 aa10.58□□□□□ -0.72
LDB3-207ENST00000542786 MYO9AB2RTY4 2548 aa10.58□□□□□ -0.72
LDB3-207ENST00000542786 EVI2AP22794 236 aa10.57□□□□□ -0.72
LDB3-207ENST00000542786 PSMG4Q5JS54 123 aa10.57□□□□□ -0.72
LDB3-207ENST00000542786 PRSS3P2Q8NHM4 247 aa10.57□□□□□ -0.72
LDB3-207ENST00000542786 LAMTOR2Q9Y2Q5 125 aa10.57□□□□□ -0.72
LDB3-207ENST00000542786 NXPH4O95158 308 aa10.57□□□□□ -0.72
LDB3-207ENST00000542786 TFPI2P48307 235 aa10.57□□□□□ -0.72
LDB3-207ENST00000542786 ZNF747Q9BV97 191 aa10.57□□□□□ -0.72
LDB3-207ENST00000542786 LOC389332A0A1B0GUA5 103 aa10.56□□□□□ -0.72
LDB3-207ENST00000542786 LINC01619G3V211 115 aa10.56□□□□□ -0.72
LDB3-207ENST00000542786 TCF21O43680 179 aa10.56□□□□□ -0.72
LDB3-207ENST00000542786 RNASE3P12724 160 aaKnown RBP10.56□□□□□ -0.72
LDB3-207ENST00000542786 GATA1P15976 413 aaPredicted RBP10.56□□□□□ -0.72
LDB3-207ENST00000542786 DEFB125Q8N687 156 aa10.56□□□□□ -0.72
LDB3-207ENST00000542786 NRACQ8N912 160 aa10.56□□□□□ -0.72
LDB3-207ENST00000542786 ITPR2Q14571 2701 aa10.56□□□□□ -0.72
LDB3-207ENST00000542786 ASIPP42127 132 aa10.55□□□□□ -0.72
LDB3-207ENST00000542786 MIEN1Q9BRT3 115 aa10.55□□□□□ -0.72
LDB3-207ENST00000542786 GNRH2O43555 120 aa10.55□□□□□ -0.72
LDB3-207ENST00000542786 TNFRSF6BO95407 300 aa10.55□□□□□ -0.72
LDB3-207ENST00000542786 SNRPD3P62318 126 aaKnown RBP10.55□□□□□ -0.72
LDB3-207ENST00000542786 MAJINQ3KP22 176 aa10.55□□□□□ -0.72
LDB3-207ENST00000542786 AMTNQ6UX39 209 aa10.55□□□□□ -0.72
LDB3-207ENST00000542786 ATOH7Q8N100 152 aa10.55□□□□□ -0.72
LDB3-207ENST00000542786 OR1N2Q8NGR9 330 aa10.55□□□□□ -0.72
LDB3-207ENST00000542786 WFDC12Q8WWY7 111 aa10.55□□□□□ -0.72
LDB3-207ENST00000542786 HSPB8Q9UJY1 196 aa10.55□□□□□ -0.72
LDB3-207ENST00000542786 GCN1Q92616 2671 aaKnown RBP10.54□□□□□ -0.72
LDB3-207ENST00000542786 IGLV2-18A0A075B6J9 118 aa10.54□□□□□ -0.72
LDB3-207ENST00000542786 PRSS47A8MTI9 375 aa10.54□□□□□ -0.72
LDB3-207ENST00000542786 A8MTW9 85 aa10.54□□□□□ -0.72
LDB3-207ENST00000542786 LEPP41159 167 aa10.54□□□□□ -0.72
LDB3-207ENST00000542786 SPATA45Q537H7 98 aa10.54□□□□□ -0.72
LDB3-207ENST00000542786 HIST2H2BDQ6DRA6 164 aa10.54□□□□□ -0.72
LDB3-207ENST00000542786 PET117Q6UWS5 81 aa10.54□□□□□ -0.72
LDB3-207ENST00000542786 OR11H1Q8NG94 326 aa10.54□□□□□ -0.72
LDB3-207ENST00000542786 YAE1D1Q9NRH1 226 aa10.54□□□□□ -0.72
LDB3-207ENST00000542786 TRAV9-2A0A087WT02 112 aa10.53□□□□□ -0.72
LDB3-207ENST00000542786 C7orf71A4D174 169 aa10.53□□□□□ -0.72
LDB3-207ENST00000542786 SPRY2O43597 315 aa10.53□□□□□ -0.72
LDB3-207ENST00000542786 SPANXN1Q5VSR9 72 aa10.53□□□□□ -0.72
LDB3-207ENST00000542786 OR9G4Q8NGQ1 327 aa10.53□□□□□ -0.72
LDB3-207ENST00000542786 DUX3Q96PT4 197 aa10.53□□□□□ -0.72
LDB3-207ENST00000542786 MAP1LC3AQ9H492 121 aa10.53□□□□□ -0.72
LDB3-207ENST00000542786 TRAV2A0A0B4J234 112 aa10.53□□□□□ -0.72
LDB3-207ENST00000542786 IGLC3P0DOY3 106 aa10.53□□□□□ -0.72
LDB3-207ENST00000542786 LINC01545Q5VT33 79 aa10.53□□□□□ -0.72
LDB3-207ENST00000542786 FOXI2Q6ZQN5 318 aa10.53□□□□□ -0.72
LDB3-207ENST00000542786 OR2K2Q8NGT1 345 aa10.53□□□□□ -0.72
LDB3-207ENST00000542786 DLX4Q92988 240 aaPredicted RBP10.53□□□□□ -0.72
LDB3-207ENST00000542786 ACANP16112 2415 aa10.53□□□□□ -0.72
LDB3-207ENST00000542786 RNASE1P07998 156 aaKnown RBP10.52□□□□□ -0.73
LDB3-207ENST00000542786 KLHL30-AS1Q8NEE0 82 aa10.52□□□□□ -0.73
LDB3-207ENST00000542786 MAP1LC3CQ9BXW4 147 aa10.52□□□□□ -0.73
LDB3-207ENST00000542786 FASNP49327 2511 aaKnown RBP10.52□□□□□ -0.73
LDB3-207ENST00000542786 EREGO14944 169 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 FHL3Q13643 280 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 POM121L12Q8N7R1 296 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 C16orf95Q9H693 158 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 TIMM8BQ9Y5J9 83 aaPredicted RBP10.51□□□□□ -0.73
LDB3-207ENST00000542786 TRAV26-2A0A0B4J265 109 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 TRAV12-3A0A0B4J271 114 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 C20orf202A1L168 122 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 OR4C46A6NHA9 309 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms