RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 MRGPRG-AS1Q2M3A8 158 aa6.24□□□□□ -1.41
PDLIM5-221ENST00000542407 LINC01620Q4KN68 170 aa6.24□□□□□ -1.41
PDLIM5-221ENST00000542407 IFI27P40305 119 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-221ENST00000542407 KLK5Q9Y337 293 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-221ENST00000542407 TNCP24821 2201 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 COL6A6A6NMZ7 2263 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 OXTP01178 125 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 LTAP01374 205 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 PRCDQ00LT1 54 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 PRB3Q04118 309 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 GOLT1AQ6ZVE7 132 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 PDPNQ86YL7 162 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 FAM167A-AS1Q96KT0 104 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 NDUFS7O75251 213 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 DUSP14O95147 198 aaKnown RBP6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 ZNF688P0C7X2 276 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 FCER1GP30273 86 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 PPDPFLQ8WWR9 84 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 IGFBPL1Q8WX77 278 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 ZNF414Q96IQ9 312 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 RITA1Q96K30 269 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 IGSF10Q6WRI0 2623 aa6.23□□□□□ -1.41
PDLIM5-221ENST00000542407 LY6LH3BQJ8 138 aa6.22□□□□□ -1.41
PDLIM5-221ENST00000542407 C10orf113Q5VZT2 155 aa6.22□□□□□ -1.41
PDLIM5-221ENST00000542407 EPDR1Q9UM22 224 aa6.22□□□□□ -1.41
PDLIM5-221ENST00000542407 NBASA2RRP1 2371 aa6.22□□□□□ -1.41
PDLIM5-221ENST00000542407 E9PLD3 99 aa6.22□□□□□ -1.41
PDLIM5-221ENST00000542407 BUB1B-PAK6H3BSN5 160 aa6.22□□□□□ -1.41
PDLIM5-221ENST00000542407 ZC2HC1BQ5TFG8 222 aa6.22□□□□□ -1.41
PDLIM5-221ENST00000542407 TMEM167AQ8TBQ9 72 aa6.22□□□□□ -1.41
PDLIM5-221ENST00000542407 NDUFA4L2Q9NRX3 87 aa6.22□□□□□ -1.41
PDLIM5-221ENST00000542407 DKK2Q9UBU2 259 aa6.22□□□□□ -1.41
PDLIM5-221ENST00000542407 KLF12Q9Y4X4 402 aa6.22□□□□□ -1.41
PDLIM5-221ENST00000542407 TRAV8-1A0A0A6YYK1 113 aa6.21□□□□□ -1.41
PDLIM5-221ENST00000542407 E7EUB6 86 aa6.21□□□□□ -1.41
PDLIM5-221ENST00000542407 INS-IGF2F8WCM5 200 aa6.21□□□□□ -1.41
PDLIM5-221ENST00000542407 OVOL3O00110 214 aa6.21□□□□□ -1.41
PDLIM5-221ENST00000542407 HCP5Q6MZN7 132 aa6.21□□□□□ -1.41
PDLIM5-221ENST00000542407 CIARTQ8N365 385 aaPredicted RBP6.21□□□□□ -1.41
PDLIM5-221ENST00000542407 C2orf48Q96LS8 159 aa6.21□□□□□ -1.41
PDLIM5-221ENST00000542407 Q96MF0 132 aa6.21□□□□□ -1.41
PDLIM5-221ENST00000542407 CHCHD5Q9BSY4 110 aa6.21□□□□□ -1.41
PDLIM5-221ENST00000542407 FBXL15Q9H469 300 aa6.21□□□□□ -1.41
PDLIM5-221ENST00000542407 C7orf69Q9H7B7 122 aa6.21□□□□□ -1.41
PDLIM5-221ENST00000542407 NPIPB6E9PJ23 425 aa6.21□□□□□ -1.42
PDLIM5-221ENST00000542407 ARMS2P0C7Q2 107 aa6.21□□□□□ -1.42
PDLIM5-221ENST00000542407 Q6ZQT7 251 aa6.21□□□□□ -1.42
PDLIM5-221ENST00000542407 C3orf22Q8N5N4 141 aa6.21□□□□□ -1.42
PDLIM5-221ENST00000542407 CHAC1Q9BUX1 264 aa6.21□□□□□ -1.42
PDLIM5-221ENST00000542407 MLST8Q9BVC4 326 aa6.21□□□□□ -1.42
PDLIM5-221ENST00000542407 TPSG1Q9NRR2 321 aa6.21□□□□□ -1.42
PDLIM5-221ENST00000542407 SRSF12Q8WXF0 261 aaKnown RBP6.21□□□□□ -1.42
PDLIM5-221ENST00000542407 DPH3Q96FX2 82 aa6.21□□□□□ -1.42
PDLIM5-221ENST00000542407 IGHV1-3A0A0C4DH29 117 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 TCRBV4S1A1TA0A5B7 111 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 ODF3BA8MYP8 253 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 M0R1W7 72 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 RNASE2P10153 161 aaKnown RBP6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 PRNTQ86SH4 94 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 OR11H6Q8NGC7 330 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 C9orf85Q96MD7 179 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 USP24Q9UPU5 2620 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 IGKV2D-26A0A0A0MRZ7 120 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 IGHV3-72A0A0B4J1Y9 119 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 A0A1B0GUT8 65 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 IGLL5B9A064 214 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 COX7A1P24310 79 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 ZFP36P26651 326 aaKnown RBP6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 ASIPP42127 132 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 EFNA4P52798 201 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 LGALS9BQ3B8N2 356 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 C2orf83Q53S99 150 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 LGALS9CQ6DKI2 356 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 DGAT2L7PQ6IED9 249 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 SFTA2Q6UW10 78 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 Q71RC1 249 aaPredicted RBP6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 LINC00305Q7Z4B0 112 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 IFI27L1Q96BM0 104 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 FXYD5Q96DB9 178 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 BBC3Q96PG8 261 aaPredicted RBP6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 PYGO1Q9Y3Y4 419 aa6.2□□□□□ -1.42
PDLIM5-221ENST00000542407 D6R8Y8 96 aa6.19□□□□□ -1.42
PDLIM5-221ENST00000542407 MALRD1Q5VYJ5 2156 aa6.19□□□□□ -1.42
PDLIM5-221ENST00000542407 NPIPB3Q92617 1050 aa6.19□□□□□ -1.42
PDLIM5-221ENST00000542407 PRSS22Q9GZN4 317 aa6.19□□□□□ -1.42
PDLIM5-221ENST00000542407 ABCA4P78363 2273 aa6.19□□□□□ -1.42
PDLIM5-221ENST00000542407 A0A096LNJ9 63 aa6.19□□□□□ -1.42
PDLIM5-221ENST00000542407 M0R2P5 195 aa6.19□□□□□ -1.42
PDLIM5-221ENST00000542407 WT1-ASQ06250 92 aa6.19□□□□□ -1.42
PDLIM5-221ENST00000542407 C10orf55Q5SWW7 151 aa6.19□□□□□ -1.42
PDLIM5-221ENST00000542407 LYRM7Q5U5X0 104 aa6.19□□□□□ -1.42
PDLIM5-221ENST00000542407 PATE2Q6UY27 113 aa6.19□□□□□ -1.42
PDLIM5-221ENST00000542407 VPS13CQ709C8 3753 aa6.19□□□□□ -1.42
PDLIM5-221ENST00000542407 TMSB15BA0A087X1C1 80 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 J3QQQ9 107 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 UQCRQO14949 82 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 RIGQ13278 110 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 PVRIGQ6DKI7 326 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 GAGE2AQ6NT46 116 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 GTSCR1Q86UQ5 136 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms