RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, human

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND1-205	ENST00000542367	ZNF479	Q96JC4	524 aa		11.3	□□□□□ -0.6
CCND1-205	ENST00000542367	NDFIP1	Q9BT67	221 aa		11.3	□□□□□ -0.6
CCND1-205	ENST00000542367	IGHV3-16	A0A0C4DH30	117 aa		11.29	□□□□□ -0.6
CCND1-205	ENST00000542367	TYMS	P04818	313 aa		11.29	□□□□□ -0.6
CCND1-205	ENST00000542367	IQCF2	Q8IXL9	164 aa		11.29	□□□□□ -0.6
CCND1-205	ENST00000542367	EPDR1	Q9UM22	224 aa		11.29	□□□□□ -0.6
CCND1-205	ENST00000542367	PSG8	Q9UQ74	426 aa		11.29	□□□□□ -0.6
CCND1-205	ENST00000542367		A0A1W2PPQ1	181 aa		11.28	□□□□□ -0.6
CCND1-205	ENST00000542367	GGTLC3	B5MD39	225 aa		11.28	□□□□□ -0.6
CCND1-205	ENST00000542367		G3V3Q6	166 aa		11.28	□□□□□ -0.6
CCND1-205	ENST00000542367		K7EQM0	130 aa		11.28	□□□□□ -0.6
CCND1-205	ENST00000542367		M0R2P5	195 aa		11.28	□□□□□ -0.6
CCND1-205	ENST00000542367	MRPL23	Q16540	153 aa	Known RBP	11.28	□□□□□ -0.6
CCND1-205	ENST00000542367	ZNF575	Q86XF7	245 aa		11.28	□□□□□ -0.6
CCND1-205	ENST00000542367	KCNS1	Q96KK3	526 aa		11.28	□□□□□ -0.6
CCND1-205	ENST00000542367	SIVA1	O15304	175 aa		11.27	□□□□□ -0.61
CCND1-205	ENST00000542367	ZNF80	P51504	273 aa	Predicted RBP	11.27	□□□□□ -0.61
CCND1-205	ENST00000542367	ZNF726P1	Q15940	193 aa		11.27	□□□□□ -0.61
CCND1-205	ENST00000542367	PRNT	Q86SH4	94 aa		11.27	□□□□□ -0.61
CCND1-205	ENST00000542367	SDF2L1	Q9HCN8	221 aa		11.27	□□□□□ -0.61
CCND1-205	ENST00000542367	TRAV4	A0A0B4J268	109 aa		11.26	□□□□□ -0.61
CCND1-205	ENST00000542367	CTXND1	A0A1B0GTU2	59 aa		11.26	□□□□□ -0.61
CCND1-205	ENST00000542367		A0A1W2PRE2	83 aa		11.26	□□□□□ -0.61
CCND1-205	ENST00000542367	IGLV2-11	P01706	119 aa		11.26	□□□□□ -0.61
CCND1-205	ENST00000542367	FLI1	Q01543	452 aa	Predicted RBP	11.26	□□□□□ -0.61
CCND1-205	ENST00000542367	LYPD5	Q6UWN5	251 aa		11.26	□□□□□ -0.61
CCND1-205	ENST00000542367	NEGR1	Q7Z3B1	354 aa		11.26	□□□□□ -0.61
CCND1-205	ENST00000542367	CYB561D1	Q8N8Q1	229 aa		11.26	□□□□□ -0.61
CCND1-205	ENST00000542367	OR4C5	Q8NGB2	326 aa		11.26	□□□□□ -0.61
CCND1-205	ENST00000542367		K7EQD1	137 aa		11.25	□□□□□ -0.61
CCND1-205	ENST00000542367	TAAR5	O14804	337 aa		11.25	□□□□□ -0.61
CCND1-205	ENST00000542367	ARPC5	O15511	151 aa		11.25	□□□□□ -0.61
CCND1-205	ENST00000542367	NXPH4	O95158	308 aa		11.25	□□□□□ -0.61
CCND1-205	ENST00000542367	GCG	P01275	180 aa		11.25	□□□□□ -0.61
CCND1-205	ENST00000542367	SMUG1	Q53HV7	270 aa		11.25	□□□□□ -0.61
CCND1-205	ENST00000542367	TMEM75	Q8N9X5	138 aa		11.25	□□□□□ -0.61
CCND1-205	ENST00000542367	C11orf21	Q9P2W6	132 aa		11.25	□□□□□ -0.61
CCND1-205	ENST00000542367	GYPE	P15421	78 aa		11.24	□□□□□ -0.61
CCND1-205	ENST00000542367	SRI	P30626	198 aa		11.24	□□□□□ -0.61
CCND1-205	ENST00000542367	ZFP69	Q49AA0	526 aa		11.24	□□□□□ -0.61
CCND1-205	ENST00000542367	AKR1C8P	Q5T2L2	129 aa		11.24	□□□□□ -0.61
CCND1-205	ENST00000542367	PCNP	Q8WW12	178 aa	Known RBP	11.24	□□□□□ -0.61
CCND1-205	ENST00000542367	LINC00479	Q96M42	142 aa		11.24	□□□□□ -0.61
CCND1-205	ENST00000542367	KRTAP17-1	Q9BYP8	105 aa		11.24	□□□□□ -0.61
CCND1-205	ENST00000542367	CYTL1	Q9NRR1	136 aa		11.24	□□□□□ -0.61
CCND1-205	ENST00000542367	TRAV34	A0A0B4J273	112 aa		11.23	□□□□□ -0.61
CCND1-205	ENST00000542367	FBLL1	A6NHQ2	334 aa	Known RBP	11.23	□□□□□ -0.61
CCND1-205	ENST00000542367	C16orf90	A8MZG2	172 aa		11.23	□□□□□ -0.61
CCND1-205	ENST00000542367		C9JCJ5	164 aa		11.23	□□□□□ -0.61
CCND1-205	ENST00000542367	SMLR1	H3BR10	107 aa		11.23	□□□□□ -0.61
CCND1-205	ENST00000542367	ORM1	P02763	201 aa		11.23	□□□□□ -0.61
CCND1-205	ENST00000542367	PFN1	P07737	140 aa	Known RBP	11.23	□□□□□ -0.61
CCND1-205	ENST00000542367	BTF3	P20290	206 aa	Known RBP	11.23	□□□□□ -0.61
CCND1-205	ENST00000542367	FGF8	P55075	233 aa	Predicted RBP	11.23	□□□□□ -0.61
CCND1-205	ENST00000542367	UBE2G2	P60604	165 aa		11.23	□□□□□ -0.61
CCND1-205	ENST00000542367	SAPCD1	Q5SSQ6	148 aa		11.23	□□□□□ -0.61
CCND1-205	ENST00000542367	IFNA7	P01567	189 aa		11.22	□□□□□ -0.61
CCND1-205	ENST00000542367	LINC00315	P59091	139 aa		11.22	□□□□□ -0.61
CCND1-205	ENST00000542367	ZNF876P	Q49A33	203 aa		11.22	□□□□□ -0.61
CCND1-205	ENST00000542367	ARL2-SNX15	V9GYD0	113 aa		11.21	□□□□□ -0.61
CCND1-205	ENST00000542367	LRP1B	Q9NZR2	4599 aa		11.21	□□□□□ -0.62
CCND1-205	ENST00000542367	LOC100131303	A0A0U1RQF7	123 aa		11.2	□□□□□ -0.62
CCND1-205	ENST00000542367	FAM74A7	A6NL05	159 aa		11.2	□□□□□ -0.62
CCND1-205	ENST00000542367	PPT1	P50897	306 aa		11.2	□□□□□ -0.62
CCND1-205	ENST00000542367	C9orf85	Q96MD7	179 aa		11.2	□□□□□ -0.62
CCND1-205	ENST00000542367	TXNDC17	Q9BRA2	123 aa		11.2	□□□□□ -0.62
CCND1-205	ENST00000542367	NKX6-2	Q9C056	277 aa	Predicted RBP	11.2	□□□□□ -0.62
CCND1-205	ENST00000542367	MAP1LC3B2	A6NCE7	125 aa		11.19	□□□□□ -0.62
CCND1-205	ENST00000542367	PEX7	O00628	323 aa		11.19	□□□□□ -0.62
CCND1-205	ENST00000542367	GATA1	P15976	413 aa	Predicted RBP	11.19	□□□□□ -0.62
CCND1-205	ENST00000542367	DPPA3	Q6W0C5	159 aa		11.19	□□□□□ -0.62
CCND1-205	ENST00000542367	SPATA12	Q7Z6I5	190 aa		11.19	□□□□□ -0.62
CCND1-205	ENST00000542367	MAP1LC3B	Q9GZQ8	125 aa		11.19	□□□□□ -0.62
CCND1-205	ENST00000542367	TNFRSF18	Q9Y5U5	241 aa		11.19	□□□□□ -0.62
CCND1-205	ENST00000542367	PGPEP1L	A6NFU8	196 aa		11.18	□□□□□ -0.62
CCND1-205	ENST00000542367	FABP5P3	A8MUU1	101 aa		11.18	□□□□□ -0.62
CCND1-205	ENST00000542367	RS1	O15537	224 aa		11.18	□□□□□ -0.62
CCND1-205	ENST00000542367	RNASE3	P12724	160 aa	Known RBP	11.18	□□□□□ -0.62
CCND1-205	ENST00000542367	CFAP126	Q5VTH2	177 aa		11.18	□□□□□ -0.62
CCND1-205	ENST00000542367		Q6ZRN7	208 aa	Predicted RBP	11.18	□□□□□ -0.62
CCND1-205	ENST00000542367	WFDC10B	Q8IUB3	73 aa		11.18	□□□□□ -0.62
CCND1-205	ENST00000542367	KCNRG	Q8N5I3	272 aa		11.18	□□□□□ -0.62
CCND1-205	ENST00000542367	HIST1H2BA	Q96A08	127 aa		11.18	□□□□□ -0.62
CCND1-205	ENST00000542367	LY96	Q9Y6Y9	160 aa		11.18	□□□□□ -0.62
CCND1-205	ENST00000542367	HSPG2	P98160	4391 aa		11.17	□□□□□ -0.62
CCND1-205	ENST00000542367	TRAV9-2	A0A087WT02	112 aa		11.17	□□□□□ -0.62
CCND1-205	ENST00000542367	IGHV3-73	A0A0B4J1V6	119 aa		11.17	□□□□□ -0.62
CCND1-205	ENST00000542367	IGKV3D-20	A0A0C4DH25	116 aa		11.17	□□□□□ -0.62
CCND1-205	ENST00000542367	CIDEA	O60543	219 aa		11.17	□□□□□ -0.62
CCND1-205	ENST00000542367	ZNF506	Q5JVG8	444 aa		11.17	□□□□□ -0.62
CCND1-205	ENST00000542367	SLC25A29	Q8N8R3	303 aa		11.17	□□□□□ -0.62
CCND1-205	ENST00000542367	NHLRC2	Q8NBF2	726 aa		11.17	□□□□□ -0.62
CCND1-205	ENST00000542367	PTH2	Q96A98	100 aa		11.17	□□□□□ -0.62
CCND1-205	ENST00000542367	FHIT	P49789	147 aa		11.16	□□□□□ -0.62
CCND1-205	ENST00000542367	KRTAP10-2	P60368	255 aa		11.16	□□□□□ -0.62
CCND1-205	ENST00000542367	ZNF345	Q14585	488 aa		11.16	□□□□□ -0.62
CCND1-205	ENST00000542367	SH2D6	Q7Z4S9	175 aa		11.16	□□□□□ -0.62
CCND1-205	ENST00000542367		Q86TA4	180 aa		11.16	□□□□□ -0.62
CCND1-205	ENST00000542367	OR11H4	Q8NGC9	324 aa		11.16	□□□□□ -0.62
CCND1-205	ENST00000542367	STOML3	Q8TAV4	291 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 678 ms