RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 TMEM88Q6PEY1 159 aa10.05□□□□□ -0.8
LTBR-209ENST00000541102 C16orf74Q96GX8 76 aa10.05□□□□□ -0.8
LTBR-209ENST00000541102 PYGO2Q9BRQ0 406 aa10.05□□□□□ -0.8
LTBR-209ENST00000541102 NOP10Q9NPE3 64 aaKnown RBP10.05□□□□□ -0.8
LTBR-209ENST00000541102 BIRC6Q9NR09 4857 aa10.04□□□□□ -0.8
LTBR-209ENST00000541102 IGHV1OR15-1A0A075B7D0 117 aa10.04□□□□□ -0.8
LTBR-209ENST00000541102 RGS13O14921 159 aa10.04□□□□□ -0.8
LTBR-209ENST00000541102 SRSF3P84103 164 aaKnown RBP10.04□□□□□ -0.8
LTBR-209ENST00000541102 SAPCD1Q5SSQ6 148 aa10.04□□□□□ -0.8
LTBR-209ENST00000541102 ZNF493Q6ZR52 646 aa10.04□□□□□ -0.8
LTBR-209ENST00000541102 UBE2DNLQ8IWF7 75 aa10.04□□□□□ -0.8
LTBR-209ENST00000541102 POM121L12Q8N7R1 296 aa10.04□□□□□ -0.8
LTBR-209ENST00000541102 C11orf72Q8NBR9 251 aa10.04□□□□□ -0.8
LTBR-209ENST00000541102 FAM210AQ96ND0 272 aa10.04□□□□□ -0.8
LTBR-209ENST00000541102 LINC00467Q9BRT7 94 aa10.04□□□□□ -0.8
LTBR-209ENST00000541102 NDFIP1Q9BT67 221 aa10.04□□□□□ -0.8
LTBR-209ENST00000541102 NAGKQ9UJ70 344 aa10.04□□□□□ -0.8
LTBR-209ENST00000541102 TIMM8BQ9Y5J9 83 aaPredicted RBP10.04□□□□□ -0.8
LTBR-209ENST00000541102 TRBV20OR9-2A0A075B6H5 130 aa10.03□□□□□ -0.8
LTBR-209ENST00000541102 FBLL1A6NHQ2 334 aaKnown RBP10.03□□□□□ -0.8
LTBR-209ENST00000541102 CBY3A6NI87 242 aa10.03□□□□□ -0.8
LTBR-209ENST00000541102 C9JQL5 133 aa10.03□□□□□ -0.8
LTBR-209ENST00000541102 F5H768 121 aa10.03□□□□□ -0.8
LTBR-209ENST00000541102 GNRH2O43555 120 aa10.03□□□□□ -0.8
LTBR-209ENST00000541102 IGLV2-8P01709 118 aa10.03□□□□□ -0.8
LTBR-209ENST00000541102 ANXA2RQ3ZCQ2 193 aa10.03□□□□□ -0.8
LTBR-209ENST00000541102 SMUG1Q53HV7 270 aa10.03□□□□□ -0.8
LTBR-209ENST00000541102 COX8CQ7Z4L0 72 aa10.03□□□□□ -0.8
LTBR-209ENST00000541102 EIF4E3Q8N5X7 224 aaKnown RBP10.03□□□□□ -0.8
LTBR-209ENST00000541102 TMEM263Q8WUH6 116 aaKnown RBP10.03□□□□□ -0.8
LTBR-209ENST00000541102 TXNDC17Q9BRA2 123 aa10.03□□□□□ -0.8
LTBR-209ENST00000541102 MLST8Q9BVC4 326 aa10.03□□□□□ -0.8
LTBR-209ENST00000541102 GSN-AS1Q9NRJ2 163 aa10.03□□□□□ -0.8
LTBR-209ENST00000541102 MED9Q9NWA0 146 aa10.03□□□□□ -0.8
LTBR-209ENST00000541102 ZFP30Q9Y2G7 519 aa10.03□□□□□ -0.8
LTBR-209ENST00000541102 TRAV21A0A0B4J279 112 aa10.02□□□□□ -0.81
LTBR-209ENST00000541102 PGPEP1LA6NFU8 196 aa10.02□□□□□ -0.81
LTBR-209ENST00000541102 PDE6DO43924 150 aa10.02□□□□□ -0.81
LTBR-209ENST00000541102 PFN1P07737 140 aaKnown RBP10.02□□□□□ -0.81
LTBR-209ENST00000541102 CENPWQ5EE01 88 aa10.02□□□□□ -0.81
LTBR-209ENST00000541102 ZNF575Q86XF7 245 aa10.02□□□□□ -0.81
LTBR-209ENST00000541102 BAGE2Q86Y30 109 aa10.02□□□□□ -0.81
LTBR-209ENST00000541102 TMEM183AQ8IXX5 376 aa10.02□□□□□ -0.81
LTBR-209ENST00000541102 MDFICQ9P1T7 246 aa10.02□□□□□ -0.81
LTBR-209ENST00000541102 M0R2N4 97 aa10.01□□□□□ -0.81
LTBR-209ENST00000541102 SH2D1AO60880 128 aa10.01□□□□□ -0.81
LTBR-209ENST00000541102 ATP5G1P05496 136 aa10.01□□□□□ -0.81
LTBR-209ENST00000541102 EIF5A2Q9GZV4 153 aaKnown RBP10.01□□□□□ -0.81
LTBR-209ENST00000541102 DNAH10Q8IVF4 4471 aa10.01□□□□□ -0.81
LTBR-209ENST00000541102 DNAH6Q9C0G6 4158 aa10□□□□□ -0.81
LTBR-209ENST00000541102 IGKV3D-20A0A0C4DH25 116 aa10□□□□□ -0.81
LTBR-209ENST00000541102 SNURFLB1AK76 121 aa10□□□□□ -0.81
LTBR-209ENST00000541102 TYMSP04818 313 aa10□□□□□ -0.81
LTBR-209ENST00000541102 S100A9P06702 114 aaKnown RBP10□□□□□ -0.81
LTBR-209ENST00000541102 TAGLN2P37802 199 aaKnown RBP10□□□□□ -0.81
LTBR-209ENST00000541102 ZNF674Q2M3X9 581 aa10□□□□□ -0.81
LTBR-209ENST00000541102 TDRG1Q3Y452 100 aa10□□□□□ -0.81
LTBR-209ENST00000541102 IGHV3-16A0A0C4DH30 117 aa9.99□□□□□ -0.81
LTBR-209ENST00000541102 GAGE12BA1L429 117 aa9.99□□□□□ -0.81
LTBR-209ENST00000541102 FABP5P3A8MUU1 101 aa9.99□□□□□ -0.81
LTBR-209ENST00000541102 GAGE7O76087 117 aa9.99□□□□□ -0.81
LTBR-209ENST00000541102 SRP19P09132 144 aaKnown RBP9.99□□□□□ -0.81
LTBR-209ENST00000541102 GAGE12FP0CL80 117 aa9.99□□□□□ -0.81
LTBR-209ENST00000541102 GAGE12GP0CL81 117 aa9.99□□□□□ -0.81
LTBR-209ENST00000541102 GAGE12IP0CL82 117 aa9.99□□□□□ -0.81
LTBR-209ENST00000541102 CEBPGP53567 150 aa9.99□□□□□ -0.81
LTBR-209ENST00000541102 FAM159AQ6UWV7 190 aa9.99□□□□□ -0.81
LTBR-209ENST00000541102 PARLQ9H300 379 aa9.99□□□□□ -0.81
LTBR-209ENST00000541102 IGLV2-18A0A075B6J9 118 aa9.98□□□□□ -0.81
LTBR-209ENST00000541102 M0R036 132 aa9.98□□□□□ -0.81
LTBR-209ENST00000541102 NUDT3O95989 172 aa9.98□□□□□ -0.81
LTBR-209ENST00000541102 TCL1AP56279 114 aa9.98□□□□□ -0.81
LTBR-209ENST00000541102 OR5I1Q13606 314 aa9.98□□□□□ -0.81
LTBR-209ENST00000541102 FAM162BQ5T6X4 162 aa9.98□□□□□ -0.81
LTBR-209ENST00000541102 Q6ZTI0 123 aa9.98□□□□□ -0.81
LTBR-209ENST00000541102 C15orf53Q8NAA6 179 aa9.98□□□□□ -0.81
LTBR-209ENST00000541102 KRBOX1C9JBD0 128 aa9.97□□□□□ -0.81
LTBR-209ENST00000541102 TMEM250H0YL14 139 aa9.97□□□□□ -0.81
LTBR-209ENST00000541102 GNG4P50150 75 aa9.97□□□□□ -0.81
LTBR-209ENST00000541102 RPL19P84098 196 aaKnown RBP9.97□□□□□ -0.81
LTBR-209ENST00000541102 DAZ2Q13117 558 aaKnown RBP9.97□□□□□ -0.81
LTBR-209ENST00000541102 RNF212Q495C1 297 aa9.97□□□□□ -0.81
LTBR-209ENST00000541102 IBA57Q5T440 356 aaKnown RBP9.97□□□□□ -0.81
LTBR-209ENST00000541102 PRR27Q6MZM9 219 aa9.97□□□□□ -0.81
LTBR-209ENST00000541102 LINC00612Q8N6U2 182 aa9.97□□□□□ -0.81
LTBR-209ENST00000541102 SDF2L1Q9HCN8 221 aa9.97□□□□□ -0.81
LTBR-209ENST00000541102 MRPL16Q9NX20 251 aaKnown RBP9.97□□□□□ -0.81
LTBR-209ENST00000541102 TMSB15BA0A087X1C1 80 aa9.96□□□□□ -0.82
LTBR-209ENST00000541102 GRIFINA4D1Z8 144 aa9.96□□□□□ -0.82
LTBR-209ENST00000541102 K7EN84 100 aa9.96□□□□□ -0.82
LTBR-209ENST00000541102 ORM1P02763 201 aa9.96□□□□□ -0.82
LTBR-209ENST00000541102 RNASE3P12724 160 aaKnown RBP9.96□□□□□ -0.82
LTBR-209ENST00000541102 CLLU1Q5K131 121 aa9.96□□□□□ -0.82
LTBR-209ENST00000541102 OCC1Q8TAD7 63 aa9.96□□□□□ -0.82
LTBR-209ENST00000541102 MUC4Q99102 2169 aa9.96□□□□□ -0.82
LTBR-209ENST00000541102 TRGV11A0A075B6L2 103 aa9.95□□□□□ -0.82
LTBR-209ENST00000541102 TRGV1A0A0A0MS02 117 aa9.95□□□□□ -0.82
LTBR-209ENST00000541102 B4DEV8 164 aa9.95□□□□□ -0.82
LTBR-209ENST00000541102 SPINK4O60575 86 aa9.95□□□□□ -0.82
LTBR-209ENST00000541102 MGST1P10620 155 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms