RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 NDUFA6P56556 154 aa10.56□□□□□ -0.72
CYB561A3-216ENST00000540755 PRR9Q5T870 116 aa10.56□□□□□ -0.72
CYB561A3-216ENST00000540755 NUP35Q8NFH5 326 aa10.56□□□□□ -0.72
CYB561A3-216ENST00000540755 GTSF1Q8WW33 167 aa10.56□□□□□ -0.72
CYB561A3-216ENST00000540755 SORL1Q92673 2214 aa10.56□□□□□ -0.72
CYB561A3-216ENST00000540755 TRAV21A0A0B4J279 112 aa10.55□□□□□ -0.72
CYB561A3-216ENST00000540755 A0A1B0GW15 77 aa10.55□□□□□ -0.72
CYB561A3-216ENST00000540755 GPX1P07203 203 aa10.55□□□□□ -0.72
CYB561A3-216ENST00000540755 ODF3L2Q3SX64 289 aa10.55□□□□□ -0.72
CYB561A3-216ENST00000540755 C9orf66Q5T8R8 295 aa10.55□□□□□ -0.72
CYB561A3-216ENST00000540755 FAM110AQ9BQ89 295 aa10.55□□□□□ -0.72
CYB561A3-216ENST00000540755 AGRNO00468 2067 aa10.55□□□□□ -0.72
CYB561A3-216ENST00000540755 KNCNA6PVL3 124 aa10.55□□□□□ -0.72
CYB561A3-216ENST00000540755 H3BMM0 161 aa10.55□□□□□ -0.72
CYB561A3-216ENST00000540755 TSPOP30536 169 aa10.55□□□□□ -0.72
CYB561A3-216ENST00000540755 BEAN1Q3B7T3 259 aa10.55□□□□□ -0.72
CYB561A3-216ENST00000540755 AMTNQ6UX39 209 aa10.55□□□□□ -0.72
CYB561A3-216ENST00000540755 NOTCH3Q9UM47 2321 aa10.54□□□□□ -0.72
CYB561A3-216ENST00000540755 OR11H12B2RN74 326 aa10.54□□□□□ -0.72
CYB561A3-216ENST00000540755 ORM1P02763 201 aa10.54□□□□□ -0.72
CYB561A3-216ENST00000540755 GZMBP10144 247 aa10.54□□□□□ -0.72
CYB561A3-216ENST00000540755 CDKN1BP46527 198 aa10.54□□□□□ -0.72
CYB561A3-216ENST00000540755 CLUHP3Q96NS8 147 aa10.54□□□□□ -0.72
CYB561A3-216ENST00000540755 MCRIP2Q9BUT9 160 aaKnown RBP10.54□□□□□ -0.72
CYB561A3-216ENST00000540755 MRPL18Q9H0U6 180 aaKnown RBP10.54□□□□□ -0.72
CYB561A3-216ENST00000540755 IGKV3D-20A0A0C4DH25 116 aa10.53□□□□□ -0.72
CYB561A3-216ENST00000540755 SNURFLB1AK76 121 aa10.53□□□□□ -0.72
CYB561A3-216ENST00000540755 J3KRW8 73 aa10.53□□□□□ -0.72
CYB561A3-216ENST00000540755 WFDC9Q8NEX5 89 aa10.53□□□□□ -0.72
CYB561A3-216ENST00000540755 C11orf21Q9P2W6 132 aa10.53□□□□□ -0.72
CYB561A3-216ENST00000540755 TMSB15BA0A087X1C1 80 aa10.52□□□□□ -0.73
CYB561A3-216ENST00000540755 C7orf71A4D174 169 aa10.52□□□□□ -0.73
CYB561A3-216ENST00000540755 SPINK4O60575 86 aa10.52□□□□□ -0.73
CYB561A3-216ENST00000540755 IGKV3-20P01619 116 aa10.52□□□□□ -0.73
CYB561A3-216ENST00000540755 RNASE4P34096 147 aaKnown RBP10.52□□□□□ -0.73
CYB561A3-216ENST00000540755 KIR3DS1Q14943 382 aa10.52□□□□□ -0.73
CYB561A3-216ENST00000540755 ZNF124Q15973 351 aa10.52□□□□□ -0.73
CYB561A3-216ENST00000540755 TMEM136Q6ZRR5 245 aa10.52□□□□□ -0.73
CYB561A3-216ENST00000540755 ZNF575Q86XF7 245 aa10.52□□□□□ -0.73
CYB561A3-216ENST00000540755 PGLYRP4Q96LB8 373 aa10.52□□□□□ -0.73
CYB561A3-216ENST00000540755 IGLC6P0CF74 106 aa10.51□□□□□ -0.73
CYB561A3-216ENST00000540755 S100A2P29034 98 aa10.51□□□□□ -0.73
CYB561A3-216ENST00000540755 AKR1D1P51857 326 aa10.51□□□□□ -0.73
CYB561A3-216ENST00000540755 MRPL54Q6P161 138 aaKnown RBP10.51□□□□□ -0.73
CYB561A3-216ENST00000540755 Q6ZQT7 251 aa10.51□□□□□ -0.73
CYB561A3-216ENST00000540755 BORCS7Q96B45 105 aa10.51□□□□□ -0.73
CYB561A3-216ENST00000540755 A0A1B0GXF2 115 aa10.5□□□□□ -0.73
CYB561A3-216ENST00000540755 RBMY1BA6NDE4 496 aaKnown RBP10.5□□□□□ -0.73
CYB561A3-216ENST00000540755 RBMY1EA6NEQ0 496 aaKnown RBP10.5□□□□□ -0.73
CYB561A3-216ENST00000540755 RBMY1DP0C7P1 496 aaKnown RBP10.5□□□□□ -0.73
CYB561A3-216ENST00000540755 HBBP68871 147 aa10.5□□□□□ -0.73
CYB561A3-216ENST00000540755 Q0VG73 95 aa10.5□□□□□ -0.73
CYB561A3-216ENST00000540755 RIGQ13278 110 aa10.5□□□□□ -0.73
CYB561A3-216ENST00000540755 SPINK13Q1W4C9 94 aa10.5□□□□□ -0.73
CYB561A3-216ENST00000540755 GFI1BQ5VTD9 330 aa10.5□□□□□ -0.73
CYB561A3-216ENST00000540755 FER1L6-AS1Q8NA97 138 aa10.5□□□□□ -0.73
CYB561A3-216ENST00000540755 C19orf73Q9NVV2 129 aa10.5□□□□□ -0.73
CYB561A3-216ENST00000540755 M0R2Z0 102 aa10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 ZNF324O75467 553 aaPredicted RBP10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 APCSP02743 223 aa10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 CD7P09564 240 aa10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 CTRLP40313 264 aa10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 OR10J3Q5JRS4 329 aa10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 HIST3H2BBQ8N257 126 aa10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 A0A1B0GUT8 65 aa10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 GRIFINA4D1Z8 144 aa10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 FRMD6-AS1P0C7T7 363 aa10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 SMIM6P0DI80 62 aa10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 DMRTA1Q5VZB9 504 aa10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 LYZL1Q6UWQ5 148 aa10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 TRPT1Q86TN4 253 aaKnown RBP10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 STHQ8IWL8 128 aa10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 GATD1Q8NB37 220 aa10.49□□□□□ -0.73
CYB561A3-216ENST00000540755 TRAV12-2A0A075B6T6 113 aa10.48□□□□□ -0.73
CYB561A3-216ENST00000540755 TRAV12-3A0A0B4J271 114 aa10.48□□□□□ -0.73
CYB561A3-216ENST00000540755 F2Z2F3 143 aa10.48□□□□□ -0.73
CYB561A3-216ENST00000540755 CRXO43186 299 aaPredicted RBP10.48□□□□□ -0.73
CYB561A3-216ENST00000540755 RAB4BP61018 213 aa10.48□□□□□ -0.73
CYB561A3-216ENST00000540755 ANXA2RQ3ZCQ2 193 aa10.48□□□□□ -0.73
CYB561A3-216ENST00000540755 DNLZQ5SXM8 178 aa10.48□□□□□ -0.73
CYB561A3-216ENST00000540755 LINC00518Q8N0U6 118 aa10.48□□□□□ -0.73
CYB561A3-216ENST00000540755 KCNS1Q96KK3 526 aa10.48□□□□□ -0.73
CYB561A3-216ENST00000540755 PACRGQ96M98 296 aaPredicted RBP10.48□□□□□ -0.73
CYB561A3-216ENST00000540755 TPPP3Q9BW30 176 aa10.48□□□□□ -0.73
CYB561A3-216ENST00000540755 CNFNQ9BYD5 112 aa10.48□□□□□ -0.73
CYB561A3-216ENST00000540755 NAGKQ9UJ70 344 aa10.48□□□□□ -0.73
CYB561A3-216ENST00000540755 AMBPP02760 352 aa10.47□□□□□ -0.73
CYB561A3-216ENST00000540755 OR5AL1P0C617 328 aa10.47□□□□□ -0.73
CYB561A3-216ENST00000540755 ARMS2P0C7Q2 107 aa10.47□□□□□ -0.73
CYB561A3-216ENST00000540755 ESDP10768 282 aa10.47□□□□□ -0.73
CYB561A3-216ENST00000540755 TDRG1Q3Y452 100 aa10.47□□□□□ -0.73
CYB561A3-216ENST00000540755 SSBP4Q9BWG4 385 aaPredicted RBP10.47□□□□□ -0.73
CYB561A3-216ENST00000540755 SNAI2O43623 268 aa10.46□□□□□ -0.74
CYB561A3-216ENST00000540755 MED14OSP0DP75 135 aa10.46□□□□□ -0.74
CYB561A3-216ENST00000540755 CAMPP49913 170 aa10.46□□□□□ -0.74
CYB561A3-216ENST00000540755 FXYD7P58549 80 aa10.46□□□□□ -0.74
CYB561A3-216ENST00000540755 MUC21Q5SSG8 566 aa10.46□□□□□ -0.74
CYB561A3-216ENST00000540755 KPRPQ5T749 579 aaPredicted RBP10.46□□□□□ -0.74
CYB561A3-216ENST00000540755 FAM159AQ6UWV7 190 aa10.46□□□□□ -0.74
CYB561A3-216ENST00000540755 TMEM18Q96B42 140 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms