RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 DNAH10Q8IVF4 4471 aa11.95□□□□□ -0.5
UBC-208ENST00000540700 IGHV1OR15-1A0A075B7D0 117 aa11.94□□□□□ -0.5
UBC-208ENST00000540700 NDUFS6O75380 124 aaKnown RBP11.94□□□□□ -0.5
UBC-208ENST00000540700 PFN1P07737 140 aaKnown RBP11.94□□□□□ -0.5
UBC-208ENST00000540700 RRN3P1Q2M238 152 aa11.94□□□□□ -0.5
UBC-208ENST00000540700 ANXA2RQ3ZCQ2 193 aa11.94□□□□□ -0.5
UBC-208ENST00000540700 PYGO2Q9BRQ0 406 aa11.94□□□□□ -0.5
UBC-208ENST00000540700 LINC00467Q9BRT7 94 aa11.94□□□□□ -0.5
UBC-208ENST00000540700 KIAA1109Q2LD37 5005 aa11.94□□□□□ -0.5
UBC-208ENST00000540700 TRAV21A0A0B4J279 112 aa11.93□□□□□ -0.5
UBC-208ENST00000540700 SMIM9A6NGZ8 99 aa11.93□□□□□ -0.5
UBC-208ENST00000540700 SH2D1AO60880 128 aa11.93□□□□□ -0.5
UBC-208ENST00000540700 CEBPGP53567 150 aa11.93□□□□□ -0.5
UBC-208ENST00000540700 ZNF674Q2M3X9 581 aa11.93□□□□□ -0.5
UBC-208ENST00000540700 C11orf72Q8NBR9 251 aa11.93□□□□□ -0.5
UBC-208ENST00000540700 NAGKQ9UJ70 344 aa11.93□□□□□ -0.5
UBC-208ENST00000540700 IGKV3D-20A0A0C4DH25 116 aa11.92□□□□□ -0.5
UBC-208ENST00000540700 EMP1P54849 157 aa11.92□□□□□ -0.5
UBC-208ENST00000540700 EIF4E3Q8N5X7 224 aaKnown RBP11.92□□□□□ -0.5
UBC-208ENST00000540700 K7EN84 100 aa11.91□□□□□ -0.5
UBC-208ENST00000540700 GNRH2O43555 120 aa11.91□□□□□ -0.5
UBC-208ENST00000540700 TYMSP04818 313 aa11.91□□□□□ -0.5
UBC-208ENST00000540700 GNG4P50150 75 aa11.91□□□□□ -0.5
UBC-208ENST00000540700 TDRG1Q3Y452 100 aa11.91□□□□□ -0.5
UBC-208ENST00000540700 TMEM263Q8WUH6 116 aaKnown RBP11.91□□□□□ -0.5
UBC-208ENST00000540700 KMT2AQ03164 3969 aa11.91□□□□□ -0.5
UBC-208ENST00000540700 CBY3A6NI87 242 aa11.9□□□□□ -0.5
UBC-208ENST00000540700 C9JCJ5 164 aa11.9□□□□□ -0.5
UBC-208ENST00000540700 OR5I1Q13606 314 aa11.9□□□□□ -0.5
UBC-208ENST00000540700 PEA15Q15121 130 aa11.9□□□□□ -0.5
UBC-208ENST00000540700 MDFICQ9P1T7 246 aa11.9□□□□□ -0.5
UBC-208ENST00000540700 CXorf65A6NEN9 183 aa11.89□□□□□ -0.51
UBC-208ENST00000540700 FABP5P3A8MUU1 101 aa11.89□□□□□ -0.51
UBC-208ENST00000540700 FAM162BQ5T6X4 162 aa11.89□□□□□ -0.51
UBC-208ENST00000540700 PRR27Q6MZM9 219 aa11.89□□□□□ -0.51
UBC-208ENST00000540700 FAM159AQ6UWV7 190 aa11.89□□□□□ -0.51
UBC-208ENST00000540700 OCC1Q8TAD7 63 aa11.89□□□□□ -0.51
UBC-208ENST00000540700 C16orf74Q96GX8 76 aa11.89□□□□□ -0.51
UBC-208ENST00000540700 GSN-AS1Q9NRJ2 163 aa11.89□□□□□ -0.51
UBC-208ENST00000540700 DKK2Q9UBU2 259 aa11.89□□□□□ -0.51
UBC-208ENST00000540700 IGHV3-16A0A0C4DH30 117 aa11.88□□□□□ -0.51
UBC-208ENST00000540700 M0R036 132 aa11.88□□□□□ -0.51
UBC-208ENST00000540700 MGST1P10620 155 aaKnown RBP11.88□□□□□ -0.51
UBC-208ENST00000540700 NANOS2P60321 138 aaKnown RBP11.88□□□□□ -0.51
UBC-208ENST00000540700 RPL19P84098 196 aaKnown RBP11.88□□□□□ -0.51
UBC-208ENST00000540700 FAM222AQ5U5X8 452 aa11.88□□□□□ -0.51
UBC-208ENST00000540700 C19orf71A6NCJ1 209 aa11.87□□□□□ -0.51
UBC-208ENST00000540700 KRBOX1C9JBD0 128 aa11.87□□□□□ -0.51
UBC-208ENST00000540700 C12orf74Q32Q52 190 aa11.87□□□□□ -0.51
UBC-208ENST00000540700 ZNF493Q6ZR52 646 aa11.87□□□□□ -0.51
UBC-208ENST00000540700 SMIM12Q96EX1 92 aa11.87□□□□□ -0.51
UBC-208ENST00000540700 SMIM7Q9BQ49 75 aa11.87□□□□□ -0.51
UBC-208ENST00000540700 SMDT1Q9H4I9 107 aa11.87□□□□□ -0.51
UBC-208ENST00000540700 NOP10Q9NPE3 64 aaKnown RBP11.87□□□□□ -0.51
UBC-208ENST00000540700 HECTD4Q9Y4D8 3996 aa11.87□□□□□ -0.51
UBC-208ENST00000540700 TMSB15BA0A087X1C1 80 aa11.86□□□□□ -0.51
UBC-208ENST00000540700 TMEM189A5PLL7 270 aa11.86□□□□□ -0.51
UBC-208ENST00000540700 LINC00862A6NCI5 91 aa11.86□□□□□ -0.51
UBC-208ENST00000540700 ZNF727A8MUV8 499 aa11.86□□□□□ -0.51
UBC-208ENST00000540700 TCL1AP56279 114 aa11.86□□□□□ -0.51
UBC-208ENST00000540700 LINC01559Q495D7 138 aa11.86□□□□□ -0.51
UBC-208ENST00000540700 SDF2L1Q9HCN8 221 aa11.86□□□□□ -0.51
UBC-208ENST00000540700 GRIFINA4D1Z8 144 aa11.85□□□□□ -0.51
UBC-208ENST00000540700 ORM1P02763 201 aa11.85□□□□□ -0.51
UBC-208ENST00000540700 RNASE3P12724 160 aaKnown RBP11.85□□□□□ -0.51
UBC-208ENST00000540700 IBA57Q5T440 356 aaKnown RBP11.85□□□□□ -0.51
UBC-208ENST00000540700 LINC01551Q86U37 167 aa11.85□□□□□ -0.51
UBC-208ENST00000540700 COMMD7Q86VX2 200 aa11.85□□□□□ -0.51
UBC-208ENST00000540700 TRGV11A0A075B6L2 103 aa11.84□□□□□ -0.51
UBC-208ENST00000540700 B4DEV8 164 aa11.84□□□□□ -0.51
UBC-208ENST00000540700 SFTA3P0C7M3 94 aa11.84□□□□□ -0.51
UBC-208ENST00000540700 DAZ2Q13117 558 aaKnown RBP11.84□□□□□ -0.51
UBC-208ENST00000540700 LINC00612Q8N6U2 182 aa11.84□□□□□ -0.51
UBC-208ENST00000540700 C11orf45Q8TAV5 145 aa11.84□□□□□ -0.51
UBC-208ENST00000540700 RNASE7Q9H1E1 156 aaKnown RBP11.84□□□□□ -0.51
UBC-208ENST00000540700 TIMM8BQ9Y5J9 83 aaPredicted RBP11.84□□□□□ -0.51
UBC-208ENST00000540700 SPINK4O60575 86 aa11.83□□□□□ -0.52
UBC-208ENST00000540700 ZNF415Q09FC8 603 aa11.83□□□□□ -0.52
UBC-208ENST00000540700 Q6ZTC4 211 aa11.83□□□□□ -0.52
UBC-208ENST00000540700 Q6ZTI0 123 aa11.83□□□□□ -0.52
UBC-208ENST00000540700 KCNS1Q96KK3 526 aa11.83□□□□□ -0.52
UBC-208ENST00000540700 C9orf85Q96MD7 179 aa11.83□□□□□ -0.52
UBC-208ENST00000540700 LY96Q9Y6Y9 160 aa11.83□□□□□ -0.52
UBC-208ENST00000540700 LYRM9A8MSI8 78 aa11.82□□□□□ -0.52
UBC-208ENST00000540700 SNURFLB1AK76 121 aa11.82□□□□□ -0.52
UBC-208ENST00000540700 SPART-AS1P0CW21 52 aa11.82□□□□□ -0.52
UBC-208ENST00000540700 ADCYAP1P18509 176 aa11.82□□□□□ -0.52
UBC-208ENST00000540700 RPL23P62829 140 aaKnown RBP11.82□□□□□ -0.52
UBC-208ENST00000540700 SOHLH1Q5JUK2 328 aa11.82□□□□□ -0.52
UBC-208ENST00000540700 NUDT10Q8NFP7 164 aa11.82□□□□□ -0.52
UBC-208ENST00000540700 NUDT11Q96G61 164 aa11.82□□□□□ -0.52
UBC-208ENST00000540700 MRPL16Q9NX20 251 aaKnown RBP11.82□□□□□ -0.52
UBC-208ENST00000540700 NUPR2A6NF83 97 aa11.81□□□□□ -0.52
UBC-208ENST00000540700 GZMBP10144 247 aa11.81□□□□□ -0.52
UBC-208ENST00000540700 FAM74A3Q4VXF1 159 aa11.81□□□□□ -0.52
UBC-208ENST00000540700 DNLZQ5SXM8 178 aa11.81□□□□□ -0.52
UBC-208ENST00000540700 GAGE12BA1L429 117 aa11.8□□□□□ -0.52
UBC-208ENST00000540700 H3BVH4 76 aa11.8□□□□□ -0.52
UBC-208ENST00000540700 GAGE7O76087 117 aa11.8□□□□□ -0.52
UBC-208ENST00000540700 GAGE12FP0CL80 117 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms