RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 RNASE4P34096 147 aaKnown RBP6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 TAS2R60P59551 318 aa6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 BTN1A1Q13410 526 aa6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 TMEM78Q5T7P6 136 aa6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 TMEM256Q8N2U0 113 aa6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 C9orf62Q8N4C0 152 aa6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 Q8TAT8 98 aa6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 STOML3Q8TAV4 291 aa6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 CMTM2Q8TAZ6 248 aa6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 TMED6Q8WW62 240 aa6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 SGK494Q96LW2 274 aa6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 C20orf144Q9BQM9 153 aa6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 MDFICQ9P1T7 246 aa6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 EPDR1Q9UM22 224 aa6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 RPH3ALQ9UNE2 315 aa6.2□□□□□ -1.42
TRAPPC1-202ENST00000540486 TRAV8-1A0A0A6YYK1 113 aa6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 TRBV7-9A0A0J9YWB2 115 aa6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 C7orf71A4D174 169 aa6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 MAP1LC3B2A6NCE7 125 aa6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 UMAD1C9J7I0 102 aa6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 IGLV2-11P01706 119 aa6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 TCRAP04437 139 aa6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 GPX1P07203 203 aa6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 SPART-AS1P0CW21 52 aa6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 TPT1P13693 172 aaKnown RBP6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 EIF5AP63241 154 aaKnown RBP6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 FAM74A1Q5RGS3 127 aa6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 FAM222AQ5U5X8 452 aa6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 GOLT1AQ6ZVE7 132 aa6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 RNASE8Q8TDE3 154 aaKnown RBP6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 MAP1LC3BQ9GZQ8 125 aa6.19□□□□□ -1.42
TRAPPC1-202ENST00000540486 FAM74A7A6NL05 159 aa6.18□□□□□ -1.42
TRAPPC1-202ENST00000540486 ZNF561-AS1K7EIQ3 104 aa6.18□□□□□ -1.42
TRAPPC1-202ENST00000540486 UBE2G2P60604 165 aa6.18□□□□□ -1.42
TRAPPC1-202ENST00000540486 CCL20P78556 96 aa6.18□□□□□ -1.42
TRAPPC1-202ENST00000540486 Q6ZSN1 163 aa6.18□□□□□ -1.42
TRAPPC1-202ENST00000540486 CCDC28AQ8IWP9 274 aa6.18□□□□□ -1.42
TRAPPC1-202ENST00000540486 IQCF2Q8IXL9 164 aa6.18□□□□□ -1.42
TRAPPC1-202ENST00000540486 C5orf17Q8NAS9 161 aa6.18□□□□□ -1.42
TRAPPC1-202ENST00000540486 SFT2D1Q8WV19 159 aa6.18□□□□□ -1.42
TRAPPC1-202ENST00000540486 LINC00479Q96M42 142 aa6.18□□□□□ -1.42
TRAPPC1-202ENST00000540486 PYGO2Q9BRQ0 406 aa6.18□□□□□ -1.42
TRAPPC1-202ENST00000540486 LENEPQ9Y5L5 61 aa6.18□□□□□ -1.42
TRAPPC1-202ENST00000540486 NKX2-5P52952 324 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC1-202ENST00000540486 DPPA3Q6W0C5 159 aa6.17□□□□□ -1.42
TRAPPC1-202ENST00000540486 ZNF493Q6ZR52 646 aa6.17□□□□□ -1.42
TRAPPC1-202ENST00000540486 SLC51BQ86UW2 128 aa6.17□□□□□ -1.42
TRAPPC1-202ENST00000540486 C11orf72Q8NBR9 251 aa6.17□□□□□ -1.42
TRAPPC1-202ENST00000540486 FAM213BQ8TBF2 198 aa6.17□□□□□ -1.42
TRAPPC1-202ENST00000540486 TMEM263Q8WUH6 116 aaKnown RBP6.17□□□□□ -1.42
TRAPPC1-202ENST00000540486 C16orf74Q96GX8 76 aa6.17□□□□□ -1.42
TRAPPC1-202ENST00000540486 LINC00467Q9BRT7 94 aa6.17□□□□□ -1.42
TRAPPC1-202ENST00000540486 NIPSNAP3BQ9BS92 247 aa6.17□□□□□ -1.42
TRAPPC1-202ENST00000540486 NOP10Q9NPE3 64 aaKnown RBP6.17□□□□□ -1.42
TRAPPC1-202ENST00000540486 TP53TG3Q9ULZ0 132 aa6.17□□□□□ -1.42
TRAPPC1-202ENST00000540486 PSG8Q9UQ74 426 aa6.17□□□□□ -1.42
TRAPPC1-202ENST00000540486 NACAE9PAV3 2078 aa6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 TRAV34A0A0B4J273 112 aa6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 A0A1B0GV50 99 aa6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 SERTM2A0A1B0GWG4 89 aa6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 LYRM9A8MSI8 78 aa6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 PAGE4O60829 102 aa6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 ATP5G3P48201 142 aa6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 SULT1A2P50226 295 aa6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 ZNF80P51504 273 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 ANXA2RQ3ZCQ2 193 aa6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 ZFP69Q49AA0 526 aa6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 Q6AWC8 147 aa6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 EIF4E3Q8N5X7 224 aaKnown RBP6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 C8orf49Q96NF6 230 aa6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 TREM1Q9NP99 234 aa6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 TIMM8BQ9Y5J9 83 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC1-202ENST00000540486 IGHV1OR15-1A0A075B7D0 117 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 TRAV1-1A0A0B4J248 108 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 IFNA7P01567 189 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 SMR3BP02814 79 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 DEFB130BP0DP73 79 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 DEFB130AP0DP74 79 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 RAB5CP51148 216 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 FLI1Q01543 452 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 MUC21Q5SSG8 566 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 PRNTQ86SH4 94 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 LINC00612Q8N6U2 182 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 CYB561D1Q8N8Q1 229 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 TMEM75Q8N9X5 138 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 ZNRF2Q8NHG8 242 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 ATG101Q9BSB4 218 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 KRTAP9-9Q9BYP9 154 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 KRTAP9-4Q9BYQ2 154 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 NKX6-2Q9C056 277 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 GSN-AS1Q9NRJ2 163 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 KLF12Q9Y4X4 402 aa6.15□□□□□ -1.42
TRAPPC1-202ENST00000540486 CBY3A6NI87 242 aa6.14□□□□□ -1.43
TRAPPC1-202ENST00000540486 F6UZH7 168 aa6.14□□□□□ -1.43
TRAPPC1-202ENST00000540486 PEX7O00628 323 aa6.14□□□□□ -1.43
TRAPPC1-202ENST00000540486 GNRH2O43555 120 aa6.14□□□□□ -1.43
TRAPPC1-202ENST00000540486 DAD1P61803 113 aa6.14□□□□□ -1.43
TRAPPC1-202ENST00000540486 DAZ2Q13117 558 aaKnown RBP6.14□□□□□ -1.43
TRAPPC1-202ENST00000540486 CST9LP1Q5W188 147 aa6.14□□□□□ -1.43
TRAPPC1-202ENST00000540486 EIF5AL1Q6IS14 154 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms