RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 F5H768 121 aa10.46□□□□□ -0.73
USB1-203ENST00000539737 TEX46H3BTG2 121 aa10.46□□□□□ -0.73
USB1-203ENST00000539737 PEX7O00628 323 aa10.46□□□□□ -0.73
USB1-203ENST00000539737 ATP5G1P05496 136 aa10.46□□□□□ -0.73
USB1-203ENST00000539737 FUSP35637 526 aaKnown RBP eCLIP10.46□□□□□ -0.73
USB1-203ENST00000539737 ATP5G3P48201 142 aa10.46□□□□□ -0.73
USB1-203ENST00000539737 SULT1A2P50226 295 aa10.46□□□□□ -0.73
USB1-203ENST00000539737 ANXA2RQ3ZCQ2 193 aa10.46□□□□□ -0.73
USB1-203ENST00000539737 Q6AWC8 147 aa10.46□□□□□ -0.73
USB1-203ENST00000539737 TREM1Q9NP99 234 aa10.46□□□□□ -0.73
USB1-203ENST00000539737 PSG8Q9UQ74 426 aa10.46□□□□□ -0.73
USB1-203ENST00000539737 IGHV1OR15-1A0A075B7D0 117 aa10.45□□□□□ -0.74
USB1-203ENST00000539737 A0A1B0GV50 99 aa10.45□□□□□ -0.74
USB1-203ENST00000539737 F6UZH7 168 aa10.45□□□□□ -0.74
USB1-203ENST00000539737 CDK2AP2O75956 126 aa10.45□□□□□ -0.74
USB1-203ENST00000539737 FAM3BP58499 235 aaPredicted RBP10.45□□□□□ -0.74
USB1-203ENST00000539737 FLI1Q01543 452 aaPredicted RBP10.45□□□□□ -0.74
USB1-203ENST00000539737 CST9LP1Q5W188 147 aa10.45□□□□□ -0.74
USB1-203ENST00000539737 TRAV1-1A0A0B4J248 108 aa10.44□□□□□ -0.74
USB1-203ENST00000539737 TRAV21A0A0B4J279 112 aa10.44□□□□□ -0.74
USB1-203ENST00000539737 PAGE4O60829 102 aa10.44□□□□□ -0.74
USB1-203ENST00000539737 KRTAP10-2P60368 255 aa10.44□□□□□ -0.74
USB1-203ENST00000539737 SPATA12Q7Z6I5 190 aa10.44□□□□□ -0.74
USB1-203ENST00000539737 Q8N1X5 172 aa10.44□□□□□ -0.74
USB1-203ENST00000539737 MANBALQ9NQG1 85 aa10.44□□□□□ -0.74
USB1-203ENST00000539737 NBDYA0A0U1RRE5 68 aa10.43□□□□□ -0.74
USB1-203ENST00000539737 NUDT3O95989 172 aa10.43□□□□□ -0.74
USB1-203ENST00000539737 IGLV2-11P01706 119 aa10.43□□□□□ -0.74
USB1-203ENST00000539737 SAPCD1Q5SSQ6 148 aa10.43□□□□□ -0.74
USB1-203ENST00000539737 IBA57Q5T440 356 aaKnown RBP10.43□□□□□ -0.74
USB1-203ENST00000539737 PRNTQ86SH4 94 aa10.43□□□□□ -0.74
USB1-203ENST00000539737 Q86TA4 180 aa10.43□□□□□ -0.74
USB1-203ENST00000539737 C6orf223Q8N319 242 aa10.43□□□□□ -0.74
USB1-203ENST00000539737 ZNRF2Q8NHG8 242 aa10.43□□□□□ -0.74
USB1-203ENST00000539737 TVP23CQ96ET8 276 aa10.43□□□□□ -0.74
USB1-203ENST00000539737 FMC1Q96HJ9 113 aa10.43□□□□□ -0.74
USB1-203ENST00000539737 SGK494Q96LW2 274 aa10.43□□□□□ -0.74
USB1-203ENST00000539737 KRTAP1-5Q9BYS1 174 aa10.43□□□□□ -0.74
USB1-203ENST00000539737 NOP10Q9NPE3 64 aaKnown RBP10.43□□□□□ -0.74
USB1-203ENST00000539737 DMBT1Q9UGM3 2413 aaPredicted RBP10.43□□□□□ -0.74
USB1-203ENST00000539737 NKX2-5P52952 324 aaPredicted RBP10.42□□□□□ -0.74
USB1-203ENST00000539737 ZNF415Q09FC8 603 aa10.42□□□□□ -0.74
USB1-203ENST00000539737 DAZ2Q13117 558 aaKnown RBP10.42□□□□□ -0.74
USB1-203ENST00000539737 SMUG1Q53HV7 270 aa10.42□□□□□ -0.74
USB1-203ENST00000539737 FAM159AQ6UWV7 190 aa10.42□□□□□ -0.74
USB1-203ENST00000539737 C11orf72Q8NBR9 251 aa10.42□□□□□ -0.74
USB1-203ENST00000539737 TRGV11A0A075B6L2 103 aa10.41□□□□□ -0.74
USB1-203ENST00000539737 AKR1C3P42330 323 aa10.41□□□□□ -0.74
USB1-203ENST00000539737 CCL18P55774 89 aa10.41□□□□□ -0.74
USB1-203ENST00000539737 TCL1AP56279 114 aa10.41□□□□□ -0.74
USB1-203ENST00000539737 UBE2G1P62253 170 aa10.41□□□□□ -0.74
USB1-203ENST00000539737 MUC21Q5SSG8 566 aa10.41□□□□□ -0.74
USB1-203ENST00000539737 Q6ZQT7 251 aa10.41□□□□□ -0.74
USB1-203ENST00000539737 GSN-AS1Q9NRJ2 163 aa10.41□□□□□ -0.74
USB1-203ENST00000539737 NAGKQ9UJ70 344 aa10.41□□□□□ -0.74
USB1-203ENST00000539737 LINC00588Q9Y4M8 146 aa10.41□□□□□ -0.74
USB1-203ENST00000539737 TRAV34A0A0B4J273 112 aa10.4□□□□□ -0.74
USB1-203ENST00000539737 GCGP01275 180 aa10.4□□□□□ -0.74
USB1-203ENST00000539737 IFNA1P01562 189 aa10.4□□□□□ -0.74
USB1-203ENST00000539737 PFN1P07737 140 aaKnown RBP10.4□□□□□ -0.74
USB1-203ENST00000539737 TDRG1Q3Y452 100 aa10.4□□□□□ -0.74
USB1-203ENST00000539737 LINC00612Q8N6U2 182 aa10.4□□□□□ -0.74
USB1-203ENST00000539737 KCNS1Q96KK3 526 aa10.4□□□□□ -0.74
USB1-203ENST00000539737 LINC00479Q96M42 142 aa10.4□□□□□ -0.74
USB1-203ENST00000539737 C8orf49Q96NF6 230 aa10.4□□□□□ -0.74
USB1-203ENST00000539737 TXNDC17Q9BRA2 123 aa10.4□□□□□ -0.74
USB1-203ENST00000539737 GNG13Q9P2W3 67 aa10.4□□□□□ -0.74
USB1-203ENST00000539737 MYCBP2O75592 4640 aa10.4□□□□□ -0.75
USB1-203ENST00000539737 TRBV6-1A0A0K0K1D8 114 aa10.39□□□□□ -0.75
USB1-203ENST00000539737 S100A9P06702 114 aaKnown RBP10.39□□□□□ -0.75
USB1-203ENST00000539737 OR5I1Q13606 314 aa10.39□□□□□ -0.75
USB1-203ENST00000539737 TMEM183BQ1AE95 376 aa10.39□□□□□ -0.75
USB1-203ENST00000539737 ALKAL2Q6UX46 152 aa10.39□□□□□ -0.75
USB1-203ENST00000539737 TMEM183AQ8IXX5 376 aa10.39□□□□□ -0.75
USB1-203ENST00000539737 SDF2L1Q9HCN8 221 aa10.39□□□□□ -0.75
USB1-203ENST00000539737 TP53TG3Q9ULZ0 132 aa10.39□□□□□ -0.75
USB1-203ENST00000539737 ZFP30Q9Y2G7 519 aa10.39□□□□□ -0.75
USB1-203ENST00000539737 KLF12Q9Y4X4 402 aa10.39□□□□□ -0.75
USB1-203ENST00000539737 CCL20P78556 96 aa10.38□□□□□ -0.75
USB1-203ENST00000539737 TRGV1A0A0A0MS02 117 aa10.37□□□□□ -0.75
USB1-203ENST00000539737 SCO2A0A1W2PP80 73 aa10.37□□□□□ -0.75
USB1-203ENST00000539737 GAGE12BA1L429 117 aa10.37□□□□□ -0.75
USB1-203ENST00000539737 SPINK4O60575 86 aa10.37□□□□□ -0.75
USB1-203ENST00000539737 GAGE7O76087 117 aa10.37□□□□□ -0.75
USB1-203ENST00000539737 LTAP01374 205 aa10.37□□□□□ -0.75
USB1-203ENST00000539737 GAGE12FP0CL80 117 aa10.37□□□□□ -0.75
USB1-203ENST00000539737 GAGE12GP0CL81 117 aa10.37□□□□□ -0.75
USB1-203ENST00000539737 GAGE12IP0CL82 117 aa10.37□□□□□ -0.75
USB1-203ENST00000539737 TAGLN2P37802 199 aaKnown RBP10.37□□□□□ -0.75
USB1-203ENST00000539737 BLOC1S1P78537 153 aa10.37□□□□□ -0.75
USB1-203ENST00000539737 Q6ZTI0 123 aa10.37□□□□□ -0.75
USB1-203ENST00000539737 FLG2Q5D862 2391 aaPredicted RBP10.36□□□□□ -0.75
USB1-203ENST00000539737 TRGV2A0A075B6R0 118 aa10.36□□□□□ -0.75
USB1-203ENST00000539737 TYMSP04818 313 aa10.36□□□□□ -0.75
USB1-203ENST00000539737 BCL2P10415 239 aa10.36□□□□□ -0.75
USB1-203ENST00000539737 ZNF80P51504 273 aaPredicted RBP10.36□□□□□ -0.75
USB1-203ENST00000539737 COX8CQ7Z4L0 72 aa10.36□□□□□ -0.75
USB1-203ENST00000539737 C11orf52Q96A22 123 aa10.36□□□□□ -0.75
USB1-203ENST00000539737 C18orf15Q96N68 181 aa10.36□□□□□ -0.75
USB1-203ENST00000539737 SPXQ9BT56 116 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms