RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 UTF1Q5T230 341 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 C9orf66Q5T8R8 295 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 ZNF493Q6ZR52 646 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 NPBQ8NG41 125 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 ZNF625Q96I27 306 aaPredicted RBP5.13□□□□□ -1.59
LSAMP-207ENST00000539563 DNAH12Q6ZR08 3092 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 PRR31Q5SQ13 230 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 LTAP01374 205 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 TCF15Q12870 199 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 ZNF524Q96C55 264 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 IGF2BP2-AS1Q96M15 143 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 PRUNE2Q8WUY3 3088 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 FOXE3Q13461 319 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 KRTAP27-1Q3LI81 207 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 PRO1854Q9UHT4 67 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 TEX48A0A1B0GUV7 120 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 PFN2P35080 140 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 PRSS57Q6UWY2 283 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 SPINK8P0C7L1 97 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 DEFB113Q30KQ7 82 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 UBL5Q9BZL1 73 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 SPTBN2O15020 2390 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 ANGP03950 147 aaKnown RBP5.12□□□□□ -1.59
LSAMP-207ENST00000539563 FGF6P10767 208 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 PRR20EP86478 221 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 PRR20CP86479 221 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 PRR20DP86480 221 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 PRR20BP86481 221 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 PRR20AP86496 221 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 SLX1AQ9BQ83 275 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 KLF2Q9Y5W3 355 aaPredicted RBP5.12□□□□□ -1.59
LSAMP-207ENST00000539563 WISP1O95388 367 aa5.12□□□□□ -1.59
LSAMP-207ENST00000539563 XIRP2A4UGR9 3374 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 IGLC7A0M8Q6 106 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 LINC01545Q5VT33 79 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 TRAV26-2A0A0B4J265 109 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 CENPVL3A0A0U1RRI6 287 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 HERV-K104P63124 156 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 DSCAMO60469 2012 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 ROS1P08922 2347 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 NDUFA12Q9UI09 145 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 EML5Q05BV3 1969 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 DEFB112Q30KQ8 113 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 WIPF2Q8TF74 440 aaPredicted RBP5.11□□□□□ -1.59
LSAMP-207ENST00000539563 GTSF1LQ9H1H1 148 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 KLF5Q13887 457 aaPredicted RBP5.11□□□□□ -1.59
LSAMP-207ENST00000539563 HLA-DMBP28068 263 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 Q6ZSR3 168 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 PRSS33Q8NF86 280 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 SCRT2Q9NQ03 307 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 WDFY3Q8IZQ1 3526 aa5.11□□□□□ -1.59
LSAMP-207ENST00000539563 MALRD1Q5VYJ5 2156 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 IGHV3-38A0A0C4DH36 116 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 DIAPH2-AS1Q14236 149 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 SH2D6Q7Z4S9 175 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 C11orf53Q8IXP5 236 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 SUMO4Q6EEV6 95 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 U3KQE9 123 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 ABCA4P78363 2273 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 PPDPFLQ8WWR9 84 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 MRPL35Q9NZE8 188 aaKnown RBP5.1□□□□□ -1.59
LSAMP-207ENST00000539563 C22orf46C9J442 243 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 DAZ2Q13117 558 aaKnown RBP5.1□□□□□ -1.59
LSAMP-207ENST00000539563 DAZ4Q86SG3 579 aaKnown RBP5.1□□□□□ -1.59
LSAMP-207ENST00000539563 IGFBPL1Q8WX77 278 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 DAZ3Q9NR90 486 aaKnown RBP5.1□□□□□ -1.59
LSAMP-207ENST00000539563 COL4A4P53420 1690 aaPredicted RBP5.1□□□□□ -1.59
LSAMP-207ENST00000539563 A0A1B0GUS0 222 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 NDUFS7O75251 213 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 EGR2P11161 476 aaPredicted RBP5.1□□□□□ -1.59
LSAMP-207ENST00000539563 Q6ZWC4 215 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 RNF138Q8WVD3 245 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 C16orf74Q96GX8 76 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 H3BQ85 93 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 IGLC2P0DOY2 106 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 IGLC3P0DOY3 106 aa5.1□□□□□ -1.59
LSAMP-207ENST00000539563 J3QQQ9 107 aa5.09□□□□□ -1.59
LSAMP-207ENST00000539563 NPYP01303 97 aa5.09□□□□□ -1.59
LSAMP-207ENST00000539563 IGHV4-59P01825 116 aa5.09□□□□□ -1.59
LSAMP-207ENST00000539563 CGB3P0DN86 165 aa5.09□□□□□ -1.59
LSAMP-207ENST00000539563 NOP10Q9NPE3 64 aaKnown RBP5.09□□□□□ -1.59
LSAMP-207ENST00000539563 LYPD6BQ8NI32 183 aa5.09□□□□□ -1.59
LSAMP-207ENST00000539563 CTSZQ9UBR2 303 aa5.09□□□□□ -1.59
LSAMP-207ENST00000539563 DYNAPQ8N1N2 210 aa5.09□□□□□ -1.59
LSAMP-207ENST00000539563 CFHR4Q92496 578 aa5.09□□□□□ -1.59
LSAMP-207ENST00000539563 A0A1W2PPM0 123 aa5.09□□□□□ -1.6
LSAMP-207ENST00000539563 C16orf54Q6UWD8 224 aa5.09□□□□□ -1.6
LSAMP-207ENST00000539563 CDH23Q9H251 3354 aa5.09□□□□□ -1.6
LSAMP-207ENST00000539563 DMDP11532 3685 aa5.08□□□□□ -1.6
LSAMP-207ENST00000539563 TRAV25A0A0B4J276 109 aa5.08□□□□□ -1.6
LSAMP-207ENST00000539563 PRSS29PA6NIE9 313 aa5.08□□□□□ -1.6
LSAMP-207ENST00000539563 PRSS47A8MTI9 375 aa5.08□□□□□ -1.6
LSAMP-207ENST00000539563 K7EN84 100 aa5.08□□□□□ -1.6
LSAMP-207ENST00000539563 IGLL1P15814 213 aa5.08□□□□□ -1.6
LSAMP-207ENST00000539563 BVES-AS1Q5T3Y7 98 aa5.08□□□□□ -1.6
LSAMP-207ENST00000539563 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.08□□□□□ -1.6
LSAMP-207ENST00000539563 GNRH2O43555 120 aa5.08□□□□□ -1.6
LSAMP-207ENST00000539563 C17orf77Q96MU5 243 aa5.08□□□□□ -1.6
LSAMP-207ENST00000539563 RSPO3Q9BXY4 272 aaPredicted RBP5.08□□□□□ -1.6
LSAMP-207ENST00000539563 TNRC6BQ9UPQ9 1833 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms