RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 ARL17AQ8IVW1 177 aa4.46□□□□□ -1.7
RAB3GAP1-207ENST00000539493 NABP2Q9BQ15 211 aa4.46□□□□□ -1.7
RAB3GAP1-207ENST00000539493 Q9UFV3 132 aa4.46□□□□□ -1.7
RAB3GAP1-207ENST00000539493 LINC00527Q9UJ94 153 aa4.46□□□□□ -1.7
RAB3GAP1-207ENST00000539493 IGKV1D-17A0A075B6S4 117 aa4.46□□□□□ -1.7
RAB3GAP1-207ENST00000539493 NCBP2LA6PVI3 153 aaKnown RBP4.46□□□□□ -1.7
RAB3GAP1-207ENST00000539493 HOXB4P17483 251 aaPredicted RBP4.46□□□□□ -1.7
RAB3GAP1-207ENST00000539493 PLNP26678 52 aa4.46□□□□□ -1.7
RAB3GAP1-207ENST00000539493 PRDX2P32119 198 aa4.46□□□□□ -1.7
RAB3GAP1-207ENST00000539493 NEXN-AS1Q8NBZ9 246 aa4.46□□□□□ -1.7
RAB3GAP1-207ENST00000539493 PLEKHA3Q9HB20 300 aa4.46□□□□□ -1.7
RAB3GAP1-207ENST00000539493 CUL9Q8IWT3 2517 aa4.46□□□□□ -1.7
RAB3GAP1-207ENST00000539493 RP1L1Q8IWN7 2480 aaPredicted RBP4.46□□□□□ -1.7
RAB3GAP1-207ENST00000539493 ZZEF1O43149 2961 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 TRAV12-1A0A0B4J245 112 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 A0A1W2PRX2 142 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 SPRY3O43610 288 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 CD40P25942 277 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 LOXL3P58215 753 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 LINC01620Q4KN68 170 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 Q8N8P6 123 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 DPH3P1Q9H4G8 78 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 TMSB15BA0A087X1C1 80 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 INS-IGF2F8WCM5 200 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 LHBP01229 141 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 COX6B1P14854 86 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 ZNF137PP52743 207 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 ZNF56Q15929 161 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 TMEM155Q4W5P6 130 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 FAM104BQ5XKR9 115 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 ORMDL3Q8N138 153 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 CYSTM1Q9H1C7 97 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 ACACAQ13085 2346 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 AGRNO00468 2067 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 MAP1BP46821 2468 aaKnown RBP4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 FSTL3O95633 263 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 TIRAPP58753 221 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 CCL8P80075 99 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 ATXN8Q156A1 80 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 GFRALQ6UXV0 394 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 ZNRF1Q8ND25 227 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 SSMEM1Q8WWF3 244 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 ZNF714Q96N38 554 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 DCTN5Q9BTE1 182 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 TPSG1Q9NRR2 321 aa4.45□□□□□ -1.7
RAB3GAP1-207ENST00000539493 CADP27708 2225 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 TANC2Q9HCD6 1990 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 TRAV12-2A0A075B6T6 113 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 IGHV3-43A0A0B4J1X8 118 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 hADV29S1A0JD25 119 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 C17orf98A8MV24 154 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 A8MZ25 164 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 H3BVH4 76 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 IGHV1-46P01743 117 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 CFC1BP0CG36 223 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 CFC1P0CG37 223 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 IGHV3-43DP0DP04 118 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 LINC00311Q8N616 119 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 NUP37Q8NFH4 326 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 HEATR1Q9H583 2144 aaKnown RBP4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 TEX49A0A1B0GTD5 131 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 DEFB108AA8MXU0 73 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 CRIP2P52943 208 aaPredicted RBP4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 UBE2L3P68036 154 aaKnown RBP4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 FAM201AQ5SY85 155 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 METTL26Q96S19 204 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 PRO1854Q9UHT4 67 aa4.44□□□□□ -1.7
RAB3GAP1-207ENST00000539493 A0A0B4J2C4 111 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 FAM236DA0A1B0GTK5 79 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 SPINT2O43291 252 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 NDUFC2O95298 119 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 AVPP01185 164 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 FAM236CP0DP71 79 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 SERP2Q8N6R1 65 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 PKIGQ9Y2B9 76 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 SERP1Q9Y6X1 66 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 LINC00473A8K010 186 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 C17orf100A8MU93 164 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 D6R8Y8 96 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 LINC00205P59089 165 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 ZNF816Q0VGE8 651 aaPredicted RBP4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 IL17RELQ6ZVW7 336 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 FXYD5Q96DB9 178 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 DSCR8Q96T75 97 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 VKORC1Q9BQB6 163 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 NXT2Q9NPJ8 142 aaKnown RBP4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 RNF7Q9UBF6 113 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 TRBV30A0A0K0K1B3 111 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 ARMS2P0C7Q2 107 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 BSPH1Q075Z2 132 aa4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 ZNF256Q9Y2P7 627 aaPredicted RBP4.43□□□□□ -1.7
RAB3GAP1-207ENST00000539493 TLN1Q9Y490 2541 aaKnown RBP4.42□□□□□ -1.7
RAB3GAP1-207ENST00000539493 PROP1O75360 226 aa4.42□□□□□ -1.7
RAB3GAP1-207ENST00000539493 IGHV3-30P01768 117 aa4.42□□□□□ -1.7
RAB3GAP1-207ENST00000539493 IGHV3-33P01772 117 aa4.42□□□□□ -1.7
RAB3GAP1-207ENST00000539493 IGHV3-30-5P0DP03 117 aa4.42□□□□□ -1.7
RAB3GAP1-207ENST00000539493 LOXP28300 417 aaPredicted RBP4.42□□□□□ -1.7
RAB3GAP1-207ENST00000539493 ASPHD1Q5U4P2 390 aa4.42□□□□□ -1.7
RAB3GAP1-207ENST00000539493 TMEM200BQ69YZ2 307 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms