RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 TMEM183AQ8IXX5 376 aa9□□□□□ -0.97
CLSTN3-208ENST00000538933 DAZAP1Q96EP5 407 aaKnown RBP9□□□□□ -0.97
CLSTN3-208ENST00000538933 SMIM12Q96EX1 92 aa9□□□□□ -0.97
CLSTN3-208ENST00000538933 IGF2BP2-AS1Q96M15 143 aa9□□□□□ -0.97
CLSTN3-208ENST00000538933 CSTL1Q9H114 145 aa9□□□□□ -0.97
CLSTN3-208ENST00000538933 XCL2Q9UBD3 114 aa9□□□□□ -0.97
CLSTN3-208ENST00000538933 TRAV12-2A0A075B6T6 113 aa8.99□□□□□ -0.97
CLSTN3-208ENST00000538933 PGPEP1LA6NFU8 196 aa8.99□□□□□ -0.97
CLSTN3-208ENST00000538933 A8MTW9 85 aa8.99□□□□□ -0.97
CLSTN3-208ENST00000538933 IGLL5B9A064 214 aa8.99□□□□□ -0.97
CLSTN3-208ENST00000538933 GCGP01275 180 aa8.99□□□□□ -0.97
CLSTN3-208ENST00000538933 CRISP2P16562 243 aa8.99□□□□□ -0.97
CLSTN3-208ENST00000538933 ADIRFQ15847 76 aa8.99□□□□□ -0.97
CLSTN3-208ENST00000538933 TMEM208Q9BTX3 173 aa8.99□□□□□ -0.97
CLSTN3-208ENST00000538933 SEC11CQ9BY50 192 aa8.99□□□□□ -0.97
CLSTN3-208ENST00000538933 UBR4Q5T4S7 5183 aa8.98□□□□□ -0.97
CLSTN3-208ENST00000538933 TRAV12-3A0A0B4J271 114 aa8.98□□□□□ -0.97
CLSTN3-208ENST00000538933 C7orf71A4D174 169 aa8.98□□□□□ -0.97
CLSTN3-208ENST00000538933 KRBOX1C9JBD0 128 aa8.98□□□□□ -0.97
CLSTN3-208ENST00000538933 CDK2AP2O75956 126 aa8.98□□□□□ -0.97
CLSTN3-208ENST00000538933 BTN1A1Q13410 526 aa8.98□□□□□ -0.97
CLSTN3-208ENST00000538933 AMTNQ6UX39 209 aa8.98□□□□□ -0.97
CLSTN3-208ENST00000538933 MAPKAPK5-AS1Q8N8E1 139 aa8.98□□□□□ -0.97
CLSTN3-208ENST00000538933 OCC1Q8TAD7 63 aa8.98□□□□□ -0.97
CLSTN3-208ENST00000538933 TVP23CQ96ET8 276 aa8.98□□□□□ -0.97
CLSTN3-208ENST00000538933 C11orf68Q9H3H3 251 aaKnown RBP8.98□□□□□ -0.97
CLSTN3-208ENST00000538933 GOLT1BQ9Y3E0 138 aa8.98□□□□□ -0.97
CLSTN3-208ENST00000538933 LY96Q9Y6Y9 160 aa8.98□□□□□ -0.97
CLSTN3-208ENST00000538933 TRBV20OR9-2A0A075B6H5 130 aa8.97□□□□□ -0.97
CLSTN3-208ENST00000538933 IGHV3OR16-12A0A075B7B8 117 aa8.97□□□□□ -0.97
CLSTN3-208ENST00000538933 TRAV21A0A0B4J279 112 aa8.97□□□□□ -0.97
CLSTN3-208ENST00000538933 FABP5P3A8MUU1 101 aa8.97□□□□□ -0.97
CLSTN3-208ENST00000538933 M0R036 132 aa8.97□□□□□ -0.97
CLSTN3-208ENST00000538933 PNRC1Q12796 327 aaPredicted RBP8.97□□□□□ -0.97
CLSTN3-208ENST00000538933 FAM162BQ5T6X4 162 aa8.97□□□□□ -0.97
CLSTN3-208ENST00000538933 GFI1BQ5VTD9 330 aa8.97□□□□□ -0.97
CLSTN3-208ENST00000538933 ZFAND2AQ8N6M9 145 aa8.97□□□□□ -0.97
CLSTN3-208ENST00000538933 ZC2HC1AQ96GY0 325 aa8.97□□□□□ -0.97
CLSTN3-208ENST00000538933 FAM19A4Q96LR4 140 aa8.97□□□□□ -0.97
CLSTN3-208ENST00000538933 NAGKQ9UJ70 344 aa8.97□□□□□ -0.97
CLSTN3-208ENST00000538933 KLLNB2CW77 178 aa8.96□□□□□ -0.98
CLSTN3-208ENST00000538933 APOC3P02656 99 aa8.96□□□□□ -0.98
CLSTN3-208ENST00000538933 PFN1P07737 140 aaKnown RBP8.96□□□□□ -0.98
CLSTN3-208ENST00000538933 LINC01551Q86U37 167 aa8.96□□□□□ -0.98
CLSTN3-208ENST00000538933 Q8N1X5 172 aa8.96□□□□□ -0.98
CLSTN3-208ENST00000538933 LINC01587Q99440 93 aa8.96□□□□□ -0.98
CLSTN3-208ENST00000538933 SDF2L1Q9HCN8 221 aa8.96□□□□□ -0.98
CLSTN3-208ENST00000538933 MYCBP2O75592 4640 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 M0R2N4 97 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 SH2D1AO60880 128 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 IGLV2-8P01709 118 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 P01737 135 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 ORM1P02763 201 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 HTN1P15515 57 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 ADCYAP1P18509 176 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 ERVFC1-1P60608 527 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 RPL23P62829 140 aaKnown RBP8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 OR5I1Q13606 314 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 KIR3DS1Q14943 382 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 IBA57Q5T440 356 aaKnown RBP8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 PRR9Q5T870 116 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 FAM159AQ6UWV7 190 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 TMEM256Q8N2U0 113 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 C15orf54Q8N8G6 183 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 C20orf144Q9BQM9 153 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 MLST8Q9BVC4 326 aa8.95□□□□□ -0.98
CLSTN3-208ENST00000538933 K7EN84 100 aa8.94□□□□□ -0.98
CLSTN3-208ENST00000538933 DEFB4AO15263 64 aa8.94□□□□□ -0.98
CLSTN3-208ENST00000538933 ZNF80P51504 273 aaPredicted RBP8.94□□□□□ -0.98
CLSTN3-208ENST00000538933 LGALS9BQ3B8N2 356 aa8.94□□□□□ -0.98
CLSTN3-208ENST00000538933 MUC21Q5SSG8 566 aa8.94□□□□□ -0.98
CLSTN3-208ENST00000538933 Q6AWC8 147 aa8.94□□□□□ -0.98
CLSTN3-208ENST00000538933 POM121L12Q8N7R1 296 aa8.94□□□□□ -0.98
CLSTN3-208ENST00000538933 OR11H2Q8NH07 326 aa8.94□□□□□ -0.98
CLSTN3-208ENST00000538933 TMEM189A5PLL7 270 aa8.93□□□□□ -0.98
CLSTN3-208ENST00000538933 ZNF705GA8MUZ8 300 aaPredicted RBP8.93□□□□□ -0.98
CLSTN3-208ENST00000538933 H7BYZ3 331 aa8.93□□□□□ -0.98
CLSTN3-208ENST00000538933 CRXO43186 299 aaPredicted RBP8.93□□□□□ -0.98
CLSTN3-208ENST00000538933 GATCO43716 136 aaKnown RBP8.93□□□□□ -0.98
CLSTN3-208ENST00000538933 Q6ZR54 194 aa8.93□□□□□ -0.98
CLSTN3-208ENST00000538933 COX8CQ7Z4L0 72 aa8.93□□□□□ -0.98
CLSTN3-208ENST00000538933 SVBPQ8N300 66 aa8.93□□□□□ -0.98
CLSTN3-208ENST00000538933 ISOC2Q96AB3 205 aa8.93□□□□□ -0.98
CLSTN3-208ENST00000538933 KCNS1Q96KK3 526 aa8.93□□□□□ -0.98
CLSTN3-208ENST00000538933 CARHSP1Q9Y2V2 147 aaKnown RBP8.93□□□□□ -0.98
CLSTN3-208ENST00000538933 IGHV4-4A0A075B6R2 117 aa8.92□□□□□ -0.98
CLSTN3-208ENST00000538933 IGHV1OR15-1A0A075B7D0 117 aa8.92□□□□□ -0.98
CLSTN3-208ENST00000538933 XKRY2A2RUG3 117 aa8.92□□□□□ -0.98
CLSTN3-208ENST00000538933 CBY3A6NI87 242 aa8.92□□□□□ -0.98
CLSTN3-208ENST00000538933 B4DEV8 164 aa8.92□□□□□ -0.98
CLSTN3-208ENST00000538933 SNAPINO95295 136 aa8.92□□□□□ -0.98
CLSTN3-208ENST00000538933 MT-ND4LP03901 98 aa8.92□□□□□ -0.98
CLSTN3-208ENST00000538933 NUDT10Q8NFP7 164 aa8.92□□□□□ -0.98
CLSTN3-208ENST00000538933 OR2D3Q8NGH3 330 aa8.92□□□□□ -0.98
CLSTN3-208ENST00000538933 OR10G8Q8NGN5 311 aa8.92□□□□□ -0.98
CLSTN3-208ENST00000538933 NUDT11Q96G61 164 aa8.92□□□□□ -0.98
CLSTN3-208ENST00000538933 SFRP2Q96HF1 295 aa8.92□□□□□ -0.98
CLSTN3-208ENST00000538933 PYGO2Q9BRQ0 406 aa8.92□□□□□ -0.98
CLSTN3-208ENST00000538933 RNASE7Q9H1E1 156 aaKnown RBP8.92□□□□□ -0.98
CLSTN3-208ENST00000538933 TRGV11A0A075B6L2 103 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms