RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ICOSQ9Y6W8 199 aa10.31□□□□□ -0.76
RAB40B-202ENST00000538809 PCLOQ9Y6V0 5065 aa10.3□□□□□ -0.76
RAB40B-202ENST00000538809 TRAV21A0A0B4J279 112 aa10.3□□□□□ -0.76
RAB40B-202ENST00000538809 CRYBA4P53673 196 aa10.3□□□□□ -0.76
RAB40B-202ENST00000538809 FHL2Q14192 279 aa10.3□□□□□ -0.76
RAB40B-202ENST00000538809 ZNF345Q14585 488 aa10.3□□□□□ -0.76
RAB40B-202ENST00000538809 OR11H4Q8NGC9 324 aa10.3□□□□□ -0.76
RAB40B-202ENST00000538809 RASL10AQ92737 203 aa10.3□□□□□ -0.76
RAB40B-202ENST00000538809 SPXQ9BT56 116 aa10.3□□□□□ -0.76
RAB40B-202ENST00000538809 PRO0255Q9UI72 69 aa10.3□□□□□ -0.76
RAB40B-202ENST00000538809 EPDR1Q9UM22 224 aa10.3□□□□□ -0.76
RAB40B-202ENST00000538809 RYR1P21817 5038 aa10.29□□□□□ -0.76
RAB40B-202ENST00000538809 TRGV4A0A0C4DH28 118 aa10.29□□□□□ -0.76
RAB40B-202ENST00000538809 IGHV3-16A0A0C4DH30 117 aa10.29□□□□□ -0.76
RAB40B-202ENST00000538809 GNRH2O43555 120 aa10.29□□□□□ -0.76
RAB40B-202ENST00000538809 TYMSP04818 313 aa10.29□□□□□ -0.76
RAB40B-202ENST00000538809 ZNF80P51504 273 aaPredicted RBP10.29□□□□□ -0.76
RAB40B-202ENST00000538809 KCNRGQ8N5I3 272 aa10.29□□□□□ -0.76
RAB40B-202ENST00000538809 CYB561D1Q8N8Q1 229 aa10.29□□□□□ -0.76
RAB40B-202ENST00000538809 TMEM75Q8N9X5 138 aa10.29□□□□□ -0.76
RAB40B-202ENST00000538809 ZNF479Q96JC4 524 aa10.29□□□□□ -0.76
RAB40B-202ENST00000538809 C11orf21Q9P2W6 132 aa10.29□□□□□ -0.76
RAB40B-202ENST00000538809 PSG8Q9UQ74 426 aa10.29□□□□□ -0.76
RAB40B-202ENST00000538809 HMSDA8MTL9 139 aa10.28□□□□□ -0.76
RAB40B-202ENST00000538809 FLI1Q01543 452 aaPredicted RBP10.28□□□□□ -0.76
RAB40B-202ENST00000538809 AKR1C8PQ5T2L2 129 aa10.28□□□□□ -0.76
RAB40B-202ENST00000538809 IQCF2Q8IXL9 164 aa10.28□□□□□ -0.76
RAB40B-202ENST00000538809 HHLA3Q9XRX5 114 aa10.28□□□□□ -0.76
RAB40B-202ENST00000538809 NXPH4O95158 308 aa10.27□□□□□ -0.77
RAB40B-202ENST00000538809 NDFIP1Q9BT67 221 aa10.27□□□□□ -0.77
RAB40B-202ENST00000538809 A0A1W2PPQ1 181 aa10.26□□□□□ -0.77
RAB40B-202ENST00000538809 FBLL1A6NHQ2 334 aaKnown RBP10.26□□□□□ -0.77
RAB40B-202ENST00000538809 FAM74A7A6NL05 159 aa10.26□□□□□ -0.77
RAB40B-202ENST00000538809 C16orf90A8MZG2 172 aa10.26□□□□□ -0.77
RAB40B-202ENST00000538809 K7EQM0 130 aa10.26□□□□□ -0.77
RAB40B-202ENST00000538809 FGF8P55075 233 aaPredicted RBP10.26□□□□□ -0.77
RAB40B-202ENST00000538809 SLAQ13239 276 aa10.26□□□□□ -0.77
RAB40B-202ENST00000538809 KCNS1Q96KK3 526 aa10.26□□□□□ -0.77
RAB40B-202ENST00000538809 LINC00479Q96M42 142 aa10.26□□□□□ -0.77
RAB40B-202ENST00000538809 SDF2L1Q9HCN8 221 aa10.26□□□□□ -0.77
RAB40B-202ENST00000538809 MAP1LC3B2A6NCE7 125 aa10.25□□□□□ -0.77
RAB40B-202ENST00000538809 M0R2P5 195 aa10.25□□□□□ -0.77
RAB40B-202ENST00000538809 SIVA1O15304 175 aa10.25□□□□□ -0.77
RAB40B-202ENST00000538809 GCGP01275 180 aa10.25□□□□□ -0.77
RAB40B-202ENST00000538809 PFN1P07737 140 aaKnown RBP10.25□□□□□ -0.77
RAB40B-202ENST00000538809 LINC00315P59091 139 aa10.25□□□□□ -0.77
RAB40B-202ENST00000538809 UBE2G2P60604 165 aa10.25□□□□□ -0.77
RAB40B-202ENST00000538809 MRPL23Q16540 153 aaKnown RBP10.25□□□□□ -0.77
RAB40B-202ENST00000538809 PRNTQ86SH4 94 aa10.25□□□□□ -0.77
RAB40B-202ENST00000538809 MAP1LC3BQ9GZQ8 125 aa10.25□□□□□ -0.77
RAB40B-202ENST00000538809 TRAV4A0A0B4J268 109 aa10.24□□□□□ -0.77
RAB40B-202ENST00000538809 TRAV34A0A0B4J273 112 aa10.24□□□□□ -0.77
RAB40B-202ENST00000538809 K7EQD1 137 aa10.24□□□□□ -0.77
RAB40B-202ENST00000538809 GYPEP15421 78 aa10.24□□□□□ -0.77
RAB40B-202ENST00000538809 SRIP30626 198 aa10.24□□□□□ -0.77
RAB40B-202ENST00000538809 FHITP49789 147 aa10.24□□□□□ -0.77
RAB40B-202ENST00000538809 SMUG1Q53HV7 270 aa10.24□□□□□ -0.77
RAB40B-202ENST00000538809 LYPD5Q6UWN5 251 aa10.24□□□□□ -0.77
RAB40B-202ENST00000538809 NEGR1Q7Z3B1 354 aa10.24□□□□□ -0.77
RAB40B-202ENST00000538809 SPATA12Q7Z6I5 190 aa10.24□□□□□ -0.77
RAB40B-202ENST00000538809 OR4C5Q8NGB2 326 aa10.24□□□□□ -0.77
RAB40B-202ENST00000538809 PCNPQ8WW12 178 aaKnown RBP10.24□□□□□ -0.77
RAB40B-202ENST00000538809 NKX6-2Q9C056 277 aaPredicted RBP10.24□□□□□ -0.77
RAB40B-202ENST00000538809 ARL2-SNX15V9GYD0 113 aa10.24□□□□□ -0.77
RAB40B-202ENST00000538809 LRP1BQ9NZR2 4599 aa10.23□□□□□ -0.77
RAB40B-202ENST00000538809 A0A0D9SG52 128 aa10.23□□□□□ -0.77
RAB40B-202ENST00000538809 LOC100131303A0A0U1RQF7 123 aa10.23□□□□□ -0.77
RAB40B-202ENST00000538809 PEX7O00628 323 aa10.23□□□□□ -0.77
RAB40B-202ENST00000538809 BCL2L11O43521 198 aa10.23□□□□□ -0.77
RAB40B-202ENST00000538809 SEC11BP0C7V7 166 aa10.23□□□□□ -0.77
RAB40B-202ENST00000538809 SAPCD1Q5SSQ6 148 aa10.23□□□□□ -0.77
RAB40B-202ENST00000538809 Q86TA4 180 aa10.23□□□□□ -0.77
RAB40B-202ENST00000538809 HIST1H2BAQ96A08 127 aa10.23□□□□□ -0.77
RAB40B-202ENST00000538809 C9orf85Q96MD7 179 aa10.23□□□□□ -0.77
RAB40B-202ENST00000538809 HSPG2P98160 4391 aa10.23□□□□□ -0.77
RAB40B-202ENST00000538809 C9JCJ5 164 aa10.22□□□□□ -0.77
RAB40B-202ENST00000538809 ZFP69Q49AA0 526 aa10.22□□□□□ -0.77
RAB40B-202ENST00000538809 COX8CQ7Z4L0 72 aa10.22□□□□□ -0.77
RAB40B-202ENST00000538809 MBD3L1Q8WWY6 194 aa10.22□□□□□ -0.77
RAB40B-202ENST00000538809 IGKV3D-20A0A0C4DH25 116 aa10.21□□□□□ -0.77
RAB40B-202ENST00000538809 IFNA7P01567 189 aa10.21□□□□□ -0.77
RAB40B-202ENST00000538809 RNASE3P12724 160 aaKnown RBP10.21□□□□□ -0.77
RAB40B-202ENST00000538809 DPPA3Q6W0C5 159 aa10.21□□□□□ -0.77
RAB40B-202ENST00000538809 WFDC10BQ8IUB3 73 aa10.21□□□□□ -0.77
RAB40B-202ENST00000538809 PTH2Q96A98 100 aa10.21□□□□□ -0.77
RAB40B-202ENST00000538809 TNFRSF18Q9Y5U5 241 aa10.21□□□□□ -0.77
RAB40B-202ENST00000538809 DNAH5Q8TE73 4624 aa10.21□□□□□ -0.78
RAB40B-202ENST00000538809 UMAD1C9J7I0 102 aa10.2□□□□□ -0.78
RAB40B-202ENST00000538809 ORM1P02763 201 aa10.2□□□□□ -0.78
RAB40B-202ENST00000538809 GATA1P15976 413 aaPredicted RBP10.2□□□□□ -0.78
RAB40B-202ENST00000538809 PPT1P50897 306 aa10.2□□□□□ -0.78
RAB40B-202ENST00000538809 KRTAP10-2P60368 255 aa10.2□□□□□ -0.78
RAB40B-202ENST00000538809 Q6ZRN7 208 aaPredicted RBP10.2□□□□□ -0.78
RAB40B-202ENST00000538809 ZNF471Q9BX82 626 aaPredicted RBP10.2□□□□□ -0.78
RAB40B-202ENST00000538809 TRBV6-1A0A0K0K1D8 114 aa10.19□□□□□ -0.78
RAB40B-202ENST00000538809 KANTRA0A1W2PQU2 76 aa10.19□□□□□ -0.78
RAB40B-202ENST00000538809 RS1O15537 224 aa10.19□□□□□ -0.78
RAB40B-202ENST00000538809 CRIP1P50238 77 aa10.19□□□□□ -0.78
RAB40B-202ENST00000538809 ZNF876PQ49A33 203 aa10.19□□□□□ -0.78
RAB40B-202ENST00000538809 TMUB2Q71RG4 321 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms