RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 NEXN-AS1Q8NBZ9 246 aa14.3□□□□□ -0.12
SFSWAP-207ENST00000538548 IGHV4-4A0A075B6R2 117 aa14.3□□□□□ -0.12
SFSWAP-207ENST00000538548 IGHV3-23P01764 117 aa14.3□□□□□ -0.12
SFSWAP-207ENST00000538548 CTSGP08311 255 aa14.3□□□□□ -0.12
SFSWAP-207ENST00000538548 SLC25A16P16260 332 aa14.3□□□□□ -0.12
SFSWAP-207ENST00000538548 ORMDL2Q53FV1 153 aa14.3□□□□□ -0.12
SFSWAP-207ENST00000538548 GLMPQ8WWB7 406 aa14.3□□□□□ -0.12
SFSWAP-207ENST00000538548 SCGB3A1Q96QR1 104 aa14.3□□□□□ -0.12
SFSWAP-207ENST00000538548 COL6A6A6NMZ7 2263 aa14.3□□□□□ -0.12
SFSWAP-207ENST00000538548 LOC107984156A0A0G2JMH3 177 aa14.29□□□□□ -0.12
SFSWAP-207ENST00000538548 TEN1Q86WV5 123 aa14.29□□□□□ -0.12
SFSWAP-207ENST00000538548 ARL17AQ8IVW1 177 aa14.29□□□□□ -0.12
SFSWAP-207ENST00000538548 PRADC1Q9BSG0 188 aa14.29□□□□□ -0.12
SFSWAP-207ENST00000538548 C5orf64Q2M2E5 130 aa14.29□□□□□ -0.12
SFSWAP-207ENST00000538548 TOMM6Q96B49 74 aa14.29□□□□□ -0.12
SFSWAP-207ENST00000538548 ERG28Q9UKR5 140 aa14.28□□□□□ -0.12
SFSWAP-207ENST00000538548 ZNF815PA8K554 130 aa14.28□□□□□ -0.12
SFSWAP-207ENST00000538548 SLC50A1Q9BRV3 221 aa14.28□□□□□ -0.12
SFSWAP-207ENST00000538548 SPANXN1Q5VSR9 72 aa14.28□□□□□ -0.12
SFSWAP-207ENST00000538548 SCGB1D4Q6XE38 83 aa14.28□□□□□ -0.12
SFSWAP-207ENST00000538548 ZFP2Q6ZN57 461 aa14.28□□□□□ -0.12
SFSWAP-207ENST00000538548 RNF182Q8N6D2 247 aa14.28□□□□□ -0.12
SFSWAP-207ENST00000538548 SRSF9Q13242 221 aaKnown RBP eCLIP14.27□□□□□ -0.132e-6■□□□□ 9
SFSWAP-207ENST00000538548 CARD19Q96LW7 228 aa14.27□□□□□ -0.13
SFSWAP-207ENST00000538548 FAM57AQ8TBR7 257 aa14.27□□□□□ -0.13
SFSWAP-207ENST00000538548 PTH2Q96A98 100 aa14.27□□□□□ -0.13
SFSWAP-207ENST00000538548 AGPAT4-IT1Q9H0P7 198 aa14.27□□□□□ -0.13
SFSWAP-207ENST00000538548 KLK15Q9H2R5 256 aa14.27□□□□□ -0.13
SFSWAP-207ENST00000538548 DPM3Q9P2X0 92 aa14.27□□□□□ -0.13
SFSWAP-207ENST00000538548 POLEQ07864 2286 aa14.26□□□□□ -0.13
SFSWAP-207ENST00000538548 CD7P09564 240 aa14.26□□□□□ -0.13
SFSWAP-207ENST00000538548 ONECUT1Q9UBC0 465 aa14.26□□□□□ -0.13
SFSWAP-207ENST00000538548 IGHV3OR16-8A0A075B7F1 116 aa14.25□□□□□ -0.13
SFSWAP-207ENST00000538548 COX6B1P14854 86 aa14.25□□□□□ -0.13
SFSWAP-207ENST00000538548 NDPQ00604 133 aa14.25□□□□□ -0.13
SFSWAP-207ENST00000538548 SFTA2Q6UW10 78 aa14.25□□□□□ -0.13
SFSWAP-207ENST00000538548 IGFL3Q6UXB1 125 aa14.25□□□□□ -0.13
SFSWAP-207ENST00000538548 VKORC1Q9BQB6 163 aa14.25□□□□□ -0.13
SFSWAP-207ENST00000538548 HES1Q14469 280 aa14.25□□□□□ -0.13
SFSWAP-207ENST00000538548 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.25□□□□□ -0.13
SFSWAP-207ENST00000538548 PLEKHB2Q96CS7 222 aa14.25□□□□□ -0.13
SFSWAP-207ENST00000538548 RNF183Q96D59 192 aa14.25□□□□□ -0.13
SFSWAP-207ENST00000538548 LRBAP50851 2863 aa14.24□□□□□ -0.13
SFSWAP-207ENST00000538548 TRBV20-1A0A075B6N2 111 aa14.24□□□□□ -0.13
SFSWAP-207ENST00000538548 SUMO2P61956 95 aaKnown RBP14.24□□□□□ -0.13
SFSWAP-207ENST00000538548 SBSPONQ8IVN8 264 aa14.24□□□□□ -0.13
SFSWAP-207ENST00000538548 BAALCQ8WXS3 180 aa14.24□□□□□ -0.13
SFSWAP-207ENST00000538548 ITPR1Q14643 2758 aa14.24□□□□□ -0.13
SFSWAP-207ENST00000538548 BUB3O43684 328 aa14.24□□□□□ -0.13
SFSWAP-207ENST00000538548 A0A0G2JNJ9 132 aa14.23□□□□□ -0.13
SFSWAP-207ENST00000538548 Q9UFV3 132 aa14.23□□□□□ -0.13
SFSWAP-207ENST00000538548 TACC2O95359 2948 aa14.23□□□□□ -0.13
SFSWAP-207ENST00000538548 E7EQL1 145 aa14.23□□□□□ -0.13
SFSWAP-207ENST00000538548 NDUFA11Q86Y39 141 aa14.23□□□□□ -0.13
SFSWAP-207ENST00000538548 RASL10AQ92737 203 aa14.23□□□□□ -0.13
SFSWAP-207ENST00000538548 IGHV3-35A0A0C4DH35 117 aa14.22□□□□□ -0.13
SFSWAP-207ENST00000538548 PRSS29PA6NIE9 313 aa14.22□□□□□ -0.13
SFSWAP-207ENST00000538548 A8MWV9 139 aa14.22□□□□□ -0.13
SFSWAP-207ENST00000538548 ZNF688P0C7X2 276 aa14.22□□□□□ -0.13
SFSWAP-207ENST00000538548 WNK2Q9Y3S1 2297 aa14.22□□□□□ -0.13
SFSWAP-207ENST00000538548 TCL1BO95988 128 aa14.22□□□□□ -0.13
SFSWAP-207ENST00000538548 C2orf66Q6UXQ4 117 aa14.22□□□□□ -0.13
SFSWAP-207ENST00000538548 H3BVH4 76 aa14.21□□□□□ -0.13
SFSWAP-207ENST00000538548 IGF2-ASQ6U949 168 aa14.21□□□□□ -0.13
SFSWAP-207ENST00000538548 ANAPC13Q9BS18 74 aa14.21□□□□□ -0.13
SFSWAP-207ENST00000538548 LYNX1G3V0Z9 82 aa14.21□□□□□ -0.14
SFSWAP-207ENST00000538548 LYNX1P0DP58 116 aa14.21□□□□□ -0.14
SFSWAP-207ENST00000538548 MSRB2Q9Y3D2 182 aa14.21□□□□□ -0.14
SFSWAP-207ENST00000538548 LINC01548A6NM66 108 aa14.2□□□□□ -0.14
SFSWAP-207ENST00000538548 TMEM262E9PQX1 116 aa14.2□□□□□ -0.14
SFSWAP-207ENST00000538548 ZFAND3Q9H8U3 227 aa14.2□□□□□ -0.14
SFSWAP-207ENST00000538548 HIF1ANQ9NWT6 349 aa14.2□□□□□ -0.14
SFSWAP-207ENST00000538548 GATA3P23771 443 aa14.2□□□□□ -0.14
SFSWAP-207ENST00000538548 MRPL53Q96EL3 112 aaKnown RBP14.2□□□□□ -0.14
SFSWAP-207ENST00000538548 ZFAND6Q6FIF0 208 aa14.19□□□□□ -0.14
SFSWAP-207ENST00000538548 C9orf47Q6ZRZ4 202 aa14.19□□□□□ -0.14
SFSWAP-207ENST00000538548 LY6G5BQ8NDX9 201 aa14.19□□□□□ -0.14
SFSWAP-207ENST00000538548 A0A0J9YY99 117 aa14.18□□□□□ -0.14
SFSWAP-207ENST00000538548 CENPVL3A0A0U1RRI6 287 aa14.18□□□□□ -0.14
SFSWAP-207ENST00000538548 Q6ZQT7 251 aa14.18□□□□□ -0.14
SFSWAP-207ENST00000538548 KLHL30-AS1Q8NEE0 82 aa14.18□□□□□ -0.14
SFSWAP-207ENST00000538548 TRAV8-2A0A0B4J237 113 aa14.18□□□□□ -0.14
SFSWAP-207ENST00000538548 ANKRD29Q8N6D5 301 aa14.18□□□□□ -0.14
SFSWAP-207ENST00000538548 B9A039 149 aa14.17□□□□□ -0.14
SFSWAP-207ENST00000538548 TEX29Q8N6K0 151 aa14.17□□□□□ -0.14
SFSWAP-207ENST00000538548 PRR30Q53SZ7 412 aaPredicted RBP14.17□□□□□ -0.14
SFSWAP-207ENST00000538548 C10orf126Q8N4M7 172 aa14.17□□□□□ -0.14
SFSWAP-207ENST00000538548 RPL39LQ96EH5 51 aaKnown RBP14.17□□□□□ -0.14
SFSWAP-207ENST00000538548 HERVK_113P61574 105 aa14.16□□□□□ -0.14
SFSWAP-207ENST00000538548 GAGE5Q13069 117 aa14.16□□□□□ -0.14
SFSWAP-207ENST00000538548 GAGE6Q13070 117 aa14.16□□□□□ -0.14
SFSWAP-207ENST00000538548 DPH3P1Q9H4G8 78 aa14.16□□□□□ -0.14
SFSWAP-207ENST00000538548 IGHV3-66A0A0C4DH42 116 aa14.16□□□□□ -0.14
SFSWAP-207ENST00000538548 SPTAN1Q13813 2472 aaKnown RBP14.15□□□□□ -0.14
SFSWAP-207ENST00000538548 ODF3BA8MYP8 253 aa14.15□□□□□ -0.14
SFSWAP-207ENST00000538548 CFC1BP0CG36 223 aa14.15□□□□□ -0.14
SFSWAP-207ENST00000538548 CFC1P0CG37 223 aa14.15□□□□□ -0.14
SFSWAP-207ENST00000538548 PAPPA-AS1Q5QFB9 102 aa14.15□□□□□ -0.14
SFSWAP-207ENST00000538548 KIR2DL4Q99706 377 aa14.15□□□□□ -0.14
SFSWAP-207ENST00000538548 CITED1Q99966 193 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms