RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 K7EQM0 130 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 IGKV2D-40P01614 121 aaPredicted RBP4.26□□□□□ -1.73
DDB1-210ENST00000538129 HBE1P02100 147 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 TCRAP04437 139 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 GPX1P07203 203 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 RBMY1A1P0DJD3 496 aaKnown RBP4.26□□□□□ -1.73
DDB1-210ENST00000538129 RBMY1CP0DJD4 496 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 PRB4P10163 310 aaPredicted RBP4.26□□□□□ -1.73
DDB1-210ENST00000538129 FHITP49789 147 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 SULT1A2P50226 295 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 PPT1P50897 306 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 FGF8P55075 233 aaPredicted RBP4.26□□□□□ -1.73
DDB1-210ENST00000538129 TAS2R60P59551 318 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 RBMY1FQ15415 496 aaKnown RBP4.26□□□□□ -1.73
DDB1-210ENST00000538129 RRN3P1Q2M238 152 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 IQCF2Q8IXL9 164 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 C5orf17Q8NAS9 161 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 C11orf45Q8TAV5 145 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 FAM213BQ8TBF2 198 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 LINC01587Q99440 93 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 ARL2-SNX15V9GYD0 113 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 IGHV3OR16-12A0A075B7B8 117 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 TRAV12-3A0A0B4J271 114 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 IGLV5-39A0A0G2JS06 123 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 C7orf71A4D174 169 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 FAM74A7A6NL05 159 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 GGTLC3B5MD39 225 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 F6UZH7 168 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 DEFB4AO15263 64 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 ZNF324O75467 553 aaPredicted RBP4.25□□□□□ -1.73
DDB1-210ENST00000538129 RNASE4P34096 147 aaKnown RBP4.25□□□□□ -1.73
DDB1-210ENST00000538129 SNRPEP62304 92 aaKnown RBP4.25□□□□□ -1.73
DDB1-210ENST00000538129 GAGE2BQ13066 116 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 GAGE2EQ4V326 116 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 GFI1BQ5VTD9 330 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 PRR27Q6MZM9 219 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 GAGE2AQ6NT46 116 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 ZNF493Q6ZR52 646 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 GOLT1AQ6ZVE7 132 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 ZFAND2AQ8N6M9 145 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 HIST1H2BAQ96A08 127 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 PYGO2Q9BRQ0 406 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 LINC00467Q9BRT7 94 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 TCEAL7Q9BRU2 100 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 NIPSNAP3BQ9BS92 247 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 ATG101Q9BSB4 218 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 GAGE2DQ9UEU5 116 aa4.25□□□□□ -1.73
DDB1-210ENST00000538129 YTHDF2Q9Y5A9 579 aaKnown RBP4.25□□□□□ -1.73
DDB1-210ENST00000538129 PLECQ15149 4684 aaKnown RBP4.25□□□□□ -1.73
DDB1-210ENST00000538129 STARD9Q9P2P6 4700 aa4.24□□□□□ -1.73
DDB1-210ENST00000538129 TEX48A0A1B0GUV7 120 aa4.24□□□□□ -1.73
DDB1-210ENST00000538129 ZNF705GA8MUZ8 300 aaPredicted RBP4.24□□□□□ -1.73
DDB1-210ENST00000538129 IFNA7P01567 189 aa4.24□□□□□ -1.73
DDB1-210ENST00000538129 SPART-AS1P0CW21 52 aa4.24□□□□□ -1.73
DDB1-210ENST00000538129 UBE2G2P60604 165 aa4.24□□□□□ -1.73
DDB1-210ENST00000538129 GNG5P63218 68 aa4.24□□□□□ -1.73
DDB1-210ENST00000538129 UBE2V1Q13404 147 aa4.24□□□□□ -1.73
DDB1-210ENST00000538129 SAPCD1Q5SSQ6 148 aa4.24□□□□□ -1.73
DDB1-210ENST00000538129 CASC10Q5T4H9 136 aa4.24□□□□□ -1.73
DDB1-210ENST00000538129 CYB561D1Q8N8Q1 229 aa4.24□□□□□ -1.73
DDB1-210ENST00000538129 Q8N9P0 234 aaPredicted RBP4.24□□□□□ -1.73
DDB1-210ENST00000538129 PSG8Q9UQ74 426 aa4.24□□□□□ -1.73
DDB1-210ENST00000538129 KLF12Q9Y4X4 402 aa4.24□□□□□ -1.73
DDB1-210ENST00000538129 CSMD3Q7Z407 3707 aa4.24□□□□□ -1.73
DDB1-210ENST00000538129 KMT2CQ8NEZ4 4911 aaKnown RBP4.23□□□□□ -1.73
DDB1-210ENST00000538129 TRAV8-1A0A0A6YYK1 113 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 GAGE12JA6NER3 117 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 C11orf94C9JXX5 98 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 PEX7O00628 323 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 IGLV2-11P01706 119 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 S100A9P06702 114 aaKnown RBP4.23□□□□□ -1.73
DDB1-210ENST00000538129 HTN1P15515 57 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 AZU1P20160 251 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 NKX2-5P52952 324 aaPredicted RBP4.23□□□□□ -1.73
DDB1-210ENST00000538129 EMP1P54849 157 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 NANOS2P60321 138 aaKnown RBP4.23□□□□□ -1.73
DDB1-210ENST00000538129 CCL20P78556 96 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 FLI1Q01543 452 aaPredicted RBP4.23□□□□□ -1.73
DDB1-210ENST00000538129 BTN1A1Q13410 526 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 C12orf74Q32Q52 190 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 Q6AWC8 147 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 CEMP1Q6PRD7 247 aaPredicted RBP4.23□□□□□ -1.73
DDB1-210ENST00000538129 NRACQ8N912 160 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 TMEM75Q8N9X5 138 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 Q8TAT8 98 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 TMEM263Q8WUH6 116 aaKnown RBP4.23□□□□□ -1.73
DDB1-210ENST00000538129 TVP23CQ96ET8 276 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 C16orf74Q96GX8 76 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 TXNDC17Q9BRA2 123 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 NDFIP1Q9BT67 221 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 TREM1Q9NP99 234 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 RPH3ALQ9UNE2 315 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 ZFP30Q9Y2G7 519 aa4.23□□□□□ -1.73
DDB1-210ENST00000538129 DYNC2H1Q8NCM8 4307 aaKnown RBP4.22□□□□□ -1.73
DDB1-210ENST00000538129 IGHV1OR15-1A0A075B7D0 117 aa4.22□□□□□ -1.73
DDB1-210ENST00000538129 TRAV21A0A0B4J279 112 aa4.22□□□□□ -1.73
DDB1-210ENST00000538129 TRBV6-1A0A0K0K1D8 114 aa4.22□□□□□ -1.73
DDB1-210ENST00000538129 A0A1B0GV50 99 aa4.22□□□□□ -1.73
DDB1-210ENST00000538129 PLAC8L1A1L4L8 177 aa4.22□□□□□ -1.73
DDB1-210ENST00000538129 NUPR2A6NF83 97 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms